RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 GNAI2P04899 355 aa10.18□□□□□ -0.78
CDH13-203ENST00000431540 MAPK4P31152 587 aa10.18□□□□□ -0.78
CDH13-203ENST00000431540 RARSP54136 660 aaKnown RBP10.18□□□□□ -0.78
CDH13-203ENST00000431540 LRIT3Q3SXY7 679 aa10.18□□□□□ -0.78
CDH13-203ENST00000431540 GORABQ5T7V8 394 aa10.18□□□□□ -0.78
CDH13-203ENST00000431540 MAP3K21Q5TCX8 1036 aa10.18□□□□□ -0.78
CDH13-203ENST00000431540 ANKRD13CQ8N6S4 541 aa10.18□□□□□ -0.78
CDH13-203ENST00000431540 SOCS4Q8WXH5 440 aa10.18□□□□□ -0.78
CDH13-203ENST00000431540 DEFB118Q96PH6 123 aa10.18□□□□□ -0.78
CDH13-203ENST00000431540 GDF15Q99988 308 aa10.18□□□□□ -0.78
CDH13-203ENST00000431540 OGDHLQ9ULD0 1010 aa10.18□□□□□ -0.78
CDH13-203ENST00000431540 MYO5AQ9Y4I1 1855 aaKnown RBP10.17□□□□□ -0.78
CDH13-203ENST00000431540 SZT2Q5T011 3432 aa10.17□□□□□ -0.78
CDH13-203ENST00000431540 USP17L10C9JJH3 530 aa10.17□□□□□ -0.78
CDH13-203ENST00000431540 MYCP01106 439 aaPredicted RBP10.17□□□□□ -0.78
CDH13-203ENST00000431540 ADORA1P30542 326 aa10.17□□□□□ -0.78
CDH13-203ENST00000431540 TFCP2Q12800 502 aa10.17□□□□□ -0.78
CDH13-203ENST00000431540 CCDC158Q5M9N0 1113 aa10.17□□□□□ -0.78
CDH13-203ENST00000431540 GPRC5AQ8NFJ5 357 aa10.17□□□□□ -0.78
CDH13-203ENST00000431540 NEUROD6Q96NK8 337 aa10.17□□□□□ -0.78
CDH13-203ENST00000431540 NUDT12Q9BQG2 462 aa10.17□□□□□ -0.78
CDH13-203ENST00000431540 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.17□□□□□ -0.78
CDH13-203ENST00000431540 ASCC2Q9H1I8 757 aaPredicted RBP10.17□□□□□ -0.78
CDH13-203ENST00000431540 TMOD4Q9NZQ9 345 aa10.17□□□□□ -0.78
CDH13-203ENST00000431540 LRP2BPQ9P2M1 347 aa10.17□□□□□ -0.78
CDH13-203ENST00000431540 PA2G4Q9UQ80 394 aaKnown RBP10.17□□□□□ -0.78
CDH13-203ENST00000431540 ZNFX1Q9P2E3 1918 aaKnown RBP10.17□□□□□ -0.78
CDH13-203ENST00000431540 MAST2Q6P0Q8 1798 aa10.16□□□□□ -0.78
CDH13-203ENST00000431540 CCER2I3L3R5 266 aa10.16□□□□□ -0.78
CDH13-203ENST00000431540 GLRX3O76003 335 aaKnown RBP10.16□□□□□ -0.78
CDH13-203ENST00000431540 PICALMQ13492 652 aa10.16□□□□□ -0.78
CDH13-203ENST00000431540 LBX2Q6XYB7 198 aa10.16□□□□□ -0.78
CDH13-203ENST00000431540 ZNF384Q8TF68 577 aa10.16□□□□□ -0.78
CDH13-203ENST00000431540 PAWRQ96IZ0 340 aaKnown RBP10.16□□□□□ -0.78
CDH13-203ENST00000431540 MEIS3Q99687 375 aa10.16□□□□□ -0.78
CDH13-203ENST00000431540 STK24Q9Y6E0 443 aa10.16□□□□□ -0.78
CDH13-203ENST00000431540 SIPA1L1O43166 1804 aa10.15□□□□□ -0.78
CDH13-203ENST00000431540 MSCO60682 206 aa10.15□□□□□ -0.78
CDH13-203ENST00000431540 ELNP15502 786 aa10.15□□□□□ -0.78
CDH13-203ENST00000431540 USP14P54578 494 aa10.15□□□□□ -0.78
CDH13-203ENST00000431540 HMGCS2P54868 508 aa10.15□□□□□ -0.78
CDH13-203ENST00000431540 CCNA1P78396 465 aa10.15□□□□□ -0.78
CDH13-203ENST00000431540 IRX3P78415 501 aaPredicted RBP10.15□□□□□ -0.78
CDH13-203ENST00000431540 TREML2Q5T2D2 321 aa10.15□□□□□ -0.78
CDH13-203ENST00000431540 NAA16Q6N069 864 aaPredicted RBP10.15□□□□□ -0.78
CDH13-203ENST00000431540 TEX11Q8IYF3 940 aa10.15□□□□□ -0.78
CDH13-203ENST00000431540 SSH3Q8TE77 659 aa10.15□□□□□ -0.78
CDH13-203ENST00000431540 USP6NLQ92738 828 aa10.15□□□□□ -0.78
CDH13-203ENST00000431540 CDCA7LQ96GN5 454 aa10.15□□□□□ -0.78
CDH13-203ENST00000431540 C12orf42Q96LP6 360 aa10.15□□□□□ -0.78
CDH13-203ENST00000431540 RAI14Q9P0K7 980 aa10.15□□□□□ -0.78
CDH13-203ENST00000431540 NOP58Q9Y2X3 529 aaKnown RBP10.15□□□□□ -0.78
CDH13-203ENST00000431540 RABGAP1Q9Y3P9 1069 aa10.15□□□□□ -0.78
CDH13-203ENST00000431540 DDX60LQ5H9U9 1706 aaKnown RBP10.14□□□□□ -0.79
CDH13-203ENST00000431540 HLA-DOAP06340 250 aa10.14□□□□□ -0.79
CDH13-203ENST00000431540 RGS2P41220 211 aa10.14□□□□□ -0.79
CDH13-203ENST00000431540 MCAMP43121 646 aa10.14□□□□□ -0.79
CDH13-203ENST00000431540 HERVK_113P62684 666 aa10.14□□□□□ -0.79
CDH13-203ENST00000431540 ATP8B2P98198 1209 aa10.14□□□□□ -0.79
CDH13-203ENST00000431540 PDE3AQ14432 1141 aa10.14□□□□□ -0.79
CDH13-203ENST00000431540 FAM109BQ6ICB4 259 aaPredicted RBP10.14□□□□□ -0.79
CDH13-203ENST00000431540 TATDN1Q6P1N9 297 aa10.14□□□□□ -0.79
CDH13-203ENST00000431540 USP17L2Q6R6M4 530 aa10.14□□□□□ -0.79
CDH13-203ENST00000431540 EHD4Q9H223 541 aa10.14□□□□□ -0.79
CDH13-203ENST00000431540 C11orf49Q9H6J7 331 aa10.14□□□□□ -0.79
CDH13-203ENST00000431540 STRNO43815 780 aa10.13□□□□□ -0.79
CDH13-203ENST00000431540 HOXC6P09630 235 aa10.13□□□□□ -0.79
CDH13-203ENST00000431540 COL6A1P12109 1028 aa10.13□□□□□ -0.79
CDH13-203ENST00000431540 MORN1Q5T089 497 aa10.13□□□□□ -0.79
CDH13-203ENST00000431540 TTC6Q86TZ1 520 aa10.13□□□□□ -0.79
CDH13-203ENST00000431540 SLC17A8Q8NDX2 589 aa10.13□□□□□ -0.79
CDH13-203ENST00000431540 P2RX7Q99572 595 aaKnown RBP10.13□□□□□ -0.79
CDH13-203ENST00000431540 ZBED2Q9BTP6 218 aa10.13□□□□□ -0.79
CDH13-203ENST00000431540 TRIM34Q9BYJ4 488 aa10.13□□□□□ -0.79
CDH13-203ENST00000431540 RBPJLQ9UBG7 517 aa10.13□□□□□ -0.79
CDH13-203ENST00000431540 FRMPD3Q5JV73 1810 aa10.12□□□□□ -0.79
CDH13-203ENST00000431540 MYH8P13535 1937 aa10.12□□□□□ -0.79
CDH13-203ENST00000431540 USP17L15C9J2P7 530 aa10.12□□□□□ -0.79
CDH13-203ENST00000431540 USP17L13C9JLJ4 530 aa10.12□□□□□ -0.79
CDH13-203ENST00000431540 USP17L11C9JVI0 530 aa10.12□□□□□ -0.79
CDH13-203ENST00000431540 USP17L18D6R9N7 530 aa10.12□□□□□ -0.79
CDH13-203ENST00000431540 USP17L22D6RA61 530 aa10.12□□□□□ -0.79
CDH13-203ENST00000431540 USP17L17D6RBQ6 530 aa10.12□□□□□ -0.79
CDH13-203ENST00000431540 USP17L19D6RCP7 530 aa10.12□□□□□ -0.79
CDH13-203ENST00000431540 USP17L20D6RJB6 530 aa10.12□□□□□ -0.79
CDH13-203ENST00000431540 GFRA3O60609 400 aa10.12□□□□□ -0.79
CDH13-203ENST00000431540 ERVK-9P63128 1117 aa10.12□□□□□ -0.79
CDH13-203ENST00000431540 ERVK-24P63145 666 aa10.12□□□□□ -0.79
CDH13-203ENST00000431540 FOXK1P85037 733 aa10.12□□□□□ -0.79
CDH13-203ENST00000431540 USP17L24Q0WX57 530 aa10.12□□□□□ -0.79
CDH13-203ENST00000431540 PLEKHH3Q7Z736 793 aa10.12□□□□□ -0.79
CDH13-203ENST00000431540 CCAR1Q8IX12 1150 aaKnown RBP10.12□□□□□ -0.79
CDH13-203ENST00000431540 TDHQ8IZJ6 230 aa10.12□□□□□ -0.79
CDH13-203ENST00000431540 CRACR2BQ8N4Y2 399 aaPredicted RBP10.12□□□□□ -0.79
CDH13-203ENST00000431540 KIAA1683Q9H0B3 1180 aa10.12□□□□□ -0.79
CDH13-203ENST00000431540 HOXC10Q9NYD6 342 aa10.12□□□□□ -0.79
CDH13-203ENST00000431540 STAP2Q9UGK3 403 aa10.12□□□□□ -0.79
CDH13-203ENST00000431540 A0A0C4DFX4 3053 aa10.12□□□□□ -0.79
CDH13-203ENST00000431540 COL6A3P12111 3177 aa10.12□□□□□ -0.79
CDH13-203ENST00000431540 SLC15A5A6NIM6 579 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms