RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 STAG1Q8WVM7 1258 aa23.82■■□□□ 1.4
CSNK1E-207ENST00000430335 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.82■■□□□ 1.4
CSNK1E-207ENST00000430335 CFHR5Q9BXR6 569 aa23.82■■□□□ 1.4
CSNK1E-207ENST00000430335 NBPF3Q9H094 633 aa23.82■■□□□ 1.4
CSNK1E-207ENST00000430335 RNF41Q9H4P4 317 aaPredicted RBP23.82■■□□□ 1.4
CSNK1E-207ENST00000430335 KANSL2Q9H9L4 492 aa23.82■■□□□ 1.4
CSNK1E-207ENST00000430335 TACC3Q9Y6A5 838 aa23.82■■□□□ 1.4
CSNK1E-207ENST00000430335 PLIN4Q96Q06 1357 aa23.81■■□□□ 1.4
CSNK1E-207ENST00000430335 NT5C2P49902 561 aa23.81■■□□□ 1.4
CSNK1E-207ENST00000430335 MTMR2Q13614 643 aa23.81■■□□□ 1.4
CSNK1E-207ENST00000430335 AKNAD1Q5T1N1 836 aa23.81■■□□□ 1.4
CSNK1E-207ENST00000430335 LSG1Q9H089 658 aaKnown RBP23.81■■□□□ 1.4
CSNK1E-207ENST00000430335 MYH8P13535 1937 aa23.8■■□□□ 1.4
CSNK1E-207ENST00000430335 IGKV6D-41A0A0C4DH26 115 aa23.8■■□□□ 1.4
CSNK1E-207ENST00000430335 TRPA1O75762 1119 aa23.8■■□□□ 1.4
CSNK1E-207ENST00000430335 HMGCS2P54868 508 aa23.8■■□□□ 1.4
CSNK1E-207ENST00000430335 ICA1Q05084 483 aa23.8■■□□□ 1.4
CSNK1E-207ENST00000430335 GPAT2Q6NUI2 795 aa23.8■■□□□ 1.4
CSNK1E-207ENST00000430335 TBC1D10CQ8IV04 446 aa23.8■■□□□ 1.4
CSNK1E-207ENST00000430335 FAM43AQ8N2R8 423 aa23.8■■□□□ 1.4
CSNK1E-207ENST00000430335 NEDD1Q8NHV4 660 aa23.8■■□□□ 1.4
CSNK1E-207ENST00000430335 KIAA1683Q9H0B3 1180 aa23.8■■□□□ 1.4
CSNK1E-207ENST00000430335 INCENPQ9NQS7 918 aa23.8■■□□□ 1.4
CSNK1E-207ENST00000430335 USP14P54578 494 aa23.79■■□□□ 1.4
CSNK1E-207ENST00000430335 GADL1Q6ZQY3 521 aa23.79■■□□□ 1.4
CSNK1E-207ENST00000430335 MFSD6Q6ZSS7 791 aa23.79■■□□□ 1.4
CSNK1E-207ENST00000430335 SIAH1Q8IUQ4 282 aa23.79■■□□□ 1.4
CSNK1E-207ENST00000430335 ACER1Q8TDN7 264 aa23.79■■□□□ 1.4
CSNK1E-207ENST00000430335 C12orf42Q96LP6 360 aa23.79■■□□□ 1.4
CSNK1E-207ENST00000430335 ARHGEF10LQ9HCE6 1279 aa23.79■■□□□ 1.4
CSNK1E-207ENST00000430335 SLC45A1Q9Y2W3 748 aa23.79■■□□□ 1.4
CSNK1E-207ENST00000430335 FOXN1O15353 648 aa23.78■■□□□ 1.4
CSNK1E-207ENST00000430335 TSPY3P0CV98 308 aa23.78■■□□□ 1.4
CSNK1E-207ENST00000430335 TSPY8P0CW00 308 aa23.78■■□□□ 1.4
CSNK1E-207ENST00000430335 TFAP4Q01664 338 aa23.78■■□□□ 1.4
CSNK1E-207ENST00000430335 USP17L2Q6R6M4 530 aa23.78■■□□□ 1.4
CSNK1E-207ENST00000430335 FEZ1Q99689 392 aa23.78■■□□□ 1.4
CSNK1E-207ENST00000430335 ANO2Q9NQ90 1003 aa23.78■■□□□ 1.4
CSNK1E-207ENST00000430335 TMOD4Q9NZQ9 345 aa23.78■■□□□ 1.4
CSNK1E-207ENST00000430335 AGTPBP1Q9UPW5 1226 aa23.78■■□□□ 1.4
CSNK1E-207ENST00000430335 PTPRFP10586 1907 aa23.78■■□□□ 1.4
CSNK1E-207ENST00000430335 GREB1LQ9C091 1923 aaPredicted RBP23.77■■□□□ 1.4
CSNK1E-207ENST00000430335 A0A1W2PRG0 241 aa23.77■■□□□ 1.4
CSNK1E-207ENST00000430335 TSPY2A6NKD2 308 aa23.77■■□□□ 1.4
CSNK1E-207ENST00000430335 FAM47AQ5JRC9 791 aa23.77■■□□□ 1.4
CSNK1E-207ENST00000430335 SH2D4AQ9H788 454 aa23.77■■□□□ 1.4
CSNK1E-207ENST00000430335 EMILIN3Q9NT22 766 aa23.77■■□□□ 1.4
CSNK1E-207ENST00000430335 NYAP2Q9P242 653 aa23.77■■□□□ 1.4
CSNK1E-207ENST00000430335 TMX2Q9Y320 296 aa23.77■■□□□ 1.4
CSNK1E-207ENST00000430335 RBM8AQ9Y5S9 174 aaKnown RBP23.77■■□□□ 1.4
CSNK1E-207ENST00000430335 LAMA4Q16363 1823 aa23.76■■□□□ 1.39
CSNK1E-207ENST00000430335 PDHXO00330 501 aa23.76■■□□□ 1.39
CSNK1E-207ENST00000430335 RANBP6O60518 1105 aaKnown RBP23.76■■□□□ 1.39
CSNK1E-207ENST00000430335 CYP21A2P08686 494 aa23.76■■□□□ 1.39
CSNK1E-207ENST00000430335 EEF2P13639 858 aaKnown RBP23.76■■□□□ 1.39
CSNK1E-207ENST00000430335 CTCFP49711 727 aaPredicted RBP23.76■■□□□ 1.39
CSNK1E-207ENST00000430335 PPP4R3BQ5MIZ7 849 aa23.76■■□□□ 1.39
CSNK1E-207ENST00000430335 CLEC10AQ8IUN9 316 aa23.76■■□□□ 1.39
CSNK1E-207ENST00000430335 TOMM22Q9NS69 142 aa23.76■■□□□ 1.39
CSNK1E-207ENST00000430335 MTMR4Q9NYA4 1195 aa23.76■■□□□ 1.39
CSNK1E-207ENST00000430335 HSPA8P11142 646 aaKnown RBP23.75■■□□□ 1.39
CSNK1E-207ENST00000430335 PABPC4Q13310 644 aaKnown RBP eCLIP23.75■■□□□ 1.39
CSNK1E-207ENST00000430335 DGKZQ13574 1117 aa23.75■■□□□ 1.39
CSNK1E-207ENST00000430335 TAF1CQ15572 869 aaPredicted RBP23.75■■□□□ 1.39
CSNK1E-207ENST00000430335 TREML2Q5T2D2 321 aa23.75■■□□□ 1.39
CSNK1E-207ENST00000430335 CEP95Q96GE4 821 aa23.75■■□□□ 1.39
CSNK1E-207ENST00000430335 ZFYVE28Q9HCC9 887 aa23.75■■□□□ 1.39
CSNK1E-207ENST00000430335 LOC285556D6RIA3 1793 aa23.74■■□□□ 1.39
CSNK1E-207ENST00000430335 TBC1D8O95759 1140 aa23.74■■□□□ 1.39
CSNK1E-207ENST00000430335 CRHR2Q13324 411 aa23.74■■□□□ 1.39
CSNK1E-207ENST00000430335 NOM1Q5C9Z4 860 aaKnown RBP23.74■■□□□ 1.39
CSNK1E-207ENST00000430335 RRP12Q5JTH9 1297 aaKnown RBP23.74■■□□□ 1.39
CSNK1E-207ENST00000430335 ESR2Q92731 530 aa23.74■■□□□ 1.39
CSNK1E-207ENST00000430335 CNNM2Q9H8M5 875 aa23.74■■□□□ 1.39
CSNK1E-207ENST00000430335 TCP11L1Q9NUJ3 509 aa23.74■■□□□ 1.39
CSNK1E-207ENST00000430335 SYNPO2Q9UMS6 1093 aa23.74■■□□□ 1.39
CSNK1E-207ENST00000430335 GTF3C3Q9Y5Q9 886 aa23.74■■□□□ 1.39
CSNK1E-207ENST00000430335 NEDD4P46934 1319 aa23.74■■□□□ 1.39
CSNK1E-207ENST00000430335 TTLL1O95922 423 aa23.73■■□□□ 1.39
CSNK1E-207ENST00000430335 HOXA7P31268 230 aaPredicted RBP23.73■■□□□ 1.39
CSNK1E-207ENST00000430335 NOVP48745 357 aa23.73■■□□□ 1.39
CSNK1E-207ENST00000430335 ZYXQ15942 572 aaKnown RBP23.73■■□□□ 1.39
CSNK1E-207ENST00000430335 MKL1Q969V6 931 aa23.73■■□□□ 1.39
CSNK1E-207ENST00000430335 PARK7Q99497 189 aaKnown RBP23.73■■□□□ 1.39
CSNK1E-207ENST00000430335 KRT23Q9C075 422 aa23.73■■□□□ 1.39
CSNK1E-207ENST00000430335 TSKSQ9UJT2 592 aa23.73■■□□□ 1.39
CSNK1E-207ENST00000430335 ATP2B2Q01814 1243 aa23.72■■□□□ 1.39
CSNK1E-207ENST00000430335 NECTIN1Q15223 517 aa23.72■■□□□ 1.39
CSNK1E-207ENST00000430335 LPAR1Q92633 364 aa23.72■■□□□ 1.39
CSNK1E-207ENST00000430335 R3HDMLQ9H3Y0 253 aa23.72■■□□□ 1.39
CSNK1E-207ENST00000430335 VCPKMTQ9H867 229 aa23.72■■□□□ 1.39
CSNK1E-207ENST00000430335 IL17RBQ9NRM6 502 aa23.72■■□□□ 1.39
CSNK1E-207ENST00000430335 PNMA3Q9UL41 463 aa23.72■■□□□ 1.39
CSNK1E-207ENST00000430335 TLR2O60603 784 aa23.71■■□□□ 1.39
CSNK1E-207ENST00000430335 REC8O95072 547 aa23.71■■□□□ 1.39
CSNK1E-207ENST00000430335 VCAM1P19320 739 aa23.71■■□□□ 1.39
CSNK1E-207ENST00000430335 CLIP2Q9UDT6 1046 aa23.71■■□□□ 1.39
CSNK1E-207ENST00000430335 EPB41L2O43491 1005 aaKnown RBP23.7■■□□□ 1.38
CSNK1E-207ENST00000430335 OSBPP22059 807 aa23.7■■□□□ 1.38
CSNK1E-207ENST00000430335 NKX2-3Q8TAU0 364 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms