RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 CACTINQ8WUQ7 758 aaKnown RBP15.71■□□□□ 0.1
THBS3-202ENST00000428962 SRPRBQ9Y5M8 271 aaKnown RBP15.71■□□□□ 0.1
THBS3-202ENST00000428962 TNS1Q9HBL0 1735 aaKnown RBP15.7■□□□□ 0.1
THBS3-202ENST00000428962 TRIM75PA6NK02 468 aa15.7■□□□□ 0.1
THBS3-202ENST00000428962 NFIXQ14938 502 aa15.7■□□□□ 0.1
THBS3-202ENST00000428962 PKN1Q16512 942 aa15.7■□□□□ 0.1
THBS3-202ENST00000428962 CCDC178Q5BJE1 867 aa15.7■□□□□ 0.1
THBS3-202ENST00000428962 KANK3Q6NY19 840 aa15.7■□□□□ 0.1
THBS3-202ENST00000428962 C15orf52Q6ZUT6 534 aaKnown RBP15.7■□□□□ 0.1
THBS3-202ENST00000428962 METTL16Q86W50 562 aaKnown RBP15.7■□□□□ 0.1
THBS3-202ENST00000428962 TSPY2A6NKD2 308 aa15.69■□□□□ 0.1
THBS3-202ENST00000428962 SMC2O95347 1197 aa15.69■□□□□ 0.1
THBS3-202ENST00000428962 PLEKHA8P1O95397 391 aa15.69■□□□□ 0.1
THBS3-202ENST00000428962 KIF5BP33176 963 aa15.69■□□□□ 0.1
THBS3-202ENST00000428962 MYL5Q02045 173 aa15.69■□□□□ 0.1
THBS3-202ENST00000428962 PNOCQ13519 176 aa15.69■□□□□ 0.1
THBS3-202ENST00000428962 CABP5Q9NP86 173 aa15.69■□□□□ 0.1
THBS3-202ENST00000428962 VPS54Q9P1Q0 977 aa15.69■□□□□ 0.1
THBS3-202ENST00000428962 DACH1Q9UI36 760 aa15.69■□□□□ 0.1
THBS3-202ENST00000428962 PCDHB6Q9Y5E3 794 aa15.69■□□□□ 0.1
THBS3-202ENST00000428962 SMIM22K7EJ46 135 aa15.68■□□□□ 0.1
THBS3-202ENST00000428962 PLSCR1O15162 318 aa15.68■□□□□ 0.1
THBS3-202ENST00000428962 CBFA2T2O43439 604 aa15.68■□□□□ 0.1
THBS3-202ENST00000428962 BAG3O95817 575 aa15.68■□□□□ 0.1
THBS3-202ENST00000428962 GTF2F1P35269 517 aaKnown RBP eCLIP15.68■□□□□ 0.1
THBS3-202ENST00000428962 USP5P45974 858 aa15.68■□□□□ 0.1
THBS3-202ENST00000428962 LONRF3Q496Y0 759 aa15.68■□□□□ 0.1
THBS3-202ENST00000428962 AMIGO3Q86WK7 504 aa15.68■□□□□ 0.1
THBS3-202ENST00000428962 CCDC150Q8NCX0 1101 aa15.68■□□□□ 0.1
THBS3-202ENST00000428962 OXER1Q8TDS5 423 aa15.68■□□□□ 0.1
THBS3-202ENST00000428962 RPGRQ92834 1020 aaKnown RBP15.68■□□□□ 0.1
THBS3-202ENST00000428962 OSBPL5Q9H0X9 879 aaPredicted RBP15.68■□□□□ 0.1
THBS3-202ENST00000428962 MCM9Q9NXL9 1143 aa15.68■□□□□ 0.1
THBS3-202ENST00000428962 V9GY48 417 aaPredicted RBP15.68■□□□□ 0.1
THBS3-202ENST00000428962 CNTNAP5Q8WYK1 1306 aa15.68■□□□□ 0.1
THBS3-202ENST00000428962 ROBO3Q96MS0 1386 aa15.68■□□□□ 0.1
THBS3-202ENST00000428962 NRDCO43847 1150 aa15.68■□□□□ 0.1
THBS3-202ENST00000428962 LDHCP07864 332 aa15.68■□□□□ 0.1
THBS3-202ENST00000428962 NCAPHQ15003 741 aa15.68■□□□□ 0.1
THBS3-202ENST00000428962 POSTNQ15063 836 aa15.68■□□□□ 0.1
THBS3-202ENST00000428962 FILIP1Q7Z7B0 1213 aa15.68■□□□□ 0.1
THBS3-202ENST00000428962 TXNRD3Q86VQ6 643 aa15.68■□□□□ 0.1
THBS3-202ENST00000428962 MAP7D2Q96T17 732 aa15.68■□□□□ 0.1
THBS3-202ENST00000428962 ST5P78524 1137 aa15.67■□□□□ 0.1
THBS3-202ENST00000428962 HSP90AA2PQ14568 343 aaPredicted RBP15.67■□□□□ 0.1
THBS3-202ENST00000428962 MTERF4Q7Z6M4 381 aaKnown RBP15.67■□□□□ 0.1
THBS3-202ENST00000428962 TRIML1Q8N9V2 468 aa15.67■□□□□ 0.1
THBS3-202ENST00000428962 FERMT2Q96AC1 680 aa15.67■□□□□ 0.1
THBS3-202ENST00000428962 XPO4Q9C0E2 1151 aaKnown RBP15.67■□□□□ 0.1
THBS3-202ENST00000428962 IFNKQ9P0W0 207 aa15.67■□□□□ 0.1
THBS3-202ENST00000428962 CYP2D6P10635 497 aa15.66■□□□□ 0.1
THBS3-202ENST00000428962 SKILP12757 684 aa15.66■□□□□ 0.1
THBS3-202ENST00000428962 FAM47AQ5JRC9 791 aa15.66■□□□□ 0.1
THBS3-202ENST00000428962 DGKHQ86XP1 1220 aa15.66■□□□□ 0.1
THBS3-202ENST00000428962 KAT14Q9H8E8 782 aa15.66■□□□□ 0.1
THBS3-202ENST00000428962 PCDHA5Q9Y5H7 936 aa15.66■□□□□ 0.1
THBS3-202ENST00000428962 NAV1Q8NEY1 1877 aa15.66■□□□□ 0.1
THBS3-202ENST00000428962 POLR2DO15514 142 aaKnown RBP15.66■□□□□ 0.1
THBS3-202ENST00000428962 SCG2P13521 617 aa15.66■□□□□ 0.1
THBS3-202ENST00000428962 ATP2B4P23634 1241 aa15.66■□□□□ 0.1
THBS3-202ENST00000428962 TRAPPC10P48553 1259 aa15.66■□□□□ 0.1
THBS3-202ENST00000428962 PPP4CP60510 307 aa15.66■□□□□ 0.1
THBS3-202ENST00000428962 FANCCQ00597 558 aa15.66■□□□□ 0.1
THBS3-202ENST00000428962 MDM2Q00987 491 aaPredicted RBP15.66■□□□□ 0.1
THBS3-202ENST00000428962 NT5DC1Q5TFE4 455 aa15.66■□□□□ 0.1
THBS3-202ENST00000428962 C12orf60Q5U649 245 aa15.66■□□□□ 0.1
THBS3-202ENST00000428962 SMARCE1Q969G3 411 aa15.66■□□□□ 0.1
THBS3-202ENST00000428962 ATP2B1P20020 1258 aa15.65■□□□□ 0.1
THBS3-202ENST00000428962 GNAQP50148 359 aa15.65■□□□□ 0.1
THBS3-202ENST00000428962 TPD52L1Q16890 204 aaPredicted RBP15.65■□□□□ 0.1
THBS3-202ENST00000428962 SPECC1Q5M775 1068 aa15.65■□□□□ 0.1
THBS3-202ENST00000428962 ISM2Q6H9L7 571 aa15.65■□□□□ 0.1
THBS3-202ENST00000428962 PRR5LQ6MZQ0 368 aa15.65■□□□□ 0.1
THBS3-202ENST00000428962 SRBD1Q8N5C6 995 aaKnown RBP15.65■□□□□ 0.1
THBS3-202ENST00000428962 MLKLQ8NB16 471 aa15.65■□□□□ 0.1
THBS3-202ENST00000428962 CSRNP2Q9H175 543 aa15.65■□□□□ 0.1
THBS3-202ENST00000428962 ZNF287Q9HBT7 754 aa15.65■□□□□ 0.1
THBS3-202ENST00000428962 MKRN1Q9UHC7 482 aaKnown RBP15.65■□□□□ 0.1
THBS3-202ENST00000428962 JAG2Q9Y219 1238 aa15.65■□□□□ 0.1
THBS3-202ENST00000428962 UBR3Q6ZT12 1888 aa15.64■□□□□ 0.09
THBS3-202ENST00000428962 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.64■□□□□ 0.09
THBS3-202ENST00000428962 PSDA5PKW4 1024 aaPredicted RBP15.64■□□□□ 0.09
THBS3-202ENST00000428962 NMT2O60551 498 aa15.64■□□□□ 0.09
THBS3-202ENST00000428962 USP17L8P0C7I0 530 aa15.64■□□□□ 0.09
THBS3-202ENST00000428962 CALML3P27482 149 aa15.64■□□□□ 0.09
THBS3-202ENST00000428962 LMOD1P29536 600 aaPredicted RBP15.64■□□□□ 0.09
THBS3-202ENST00000428962 CCZ1BP86790 482 aa15.64■□□□□ 0.09
THBS3-202ENST00000428962 CCZ1P86791 482 aaPredicted RBP15.64■□□□□ 0.09
THBS3-202ENST00000428962 PFKFB3Q16875 520 aaPredicted RBP15.64■□□□□ 0.09
THBS3-202ENST00000428962 CRY2Q49AN0 593 aa15.64■□□□□ 0.09
THBS3-202ENST00000428962 GLIPR1L2Q4G1C9 344 aa15.64■□□□□ 0.09
THBS3-202ENST00000428962 TMC6Q7Z403 805 aa15.64■□□□□ 0.09
THBS3-202ENST00000428962 ANKS1AQ92625 1134 aa15.64■□□□□ 0.09
THBS3-202ENST00000428962 TNFRSF25Q93038 417 aa15.64■□□□□ 0.09
THBS3-202ENST00000428962 SHISA4Q96DD7 197 aa15.64■□□□□ 0.09
THBS3-202ENST00000428962 RBM17Q96I25 401 aaKnown RBP15.64■□□□□ 0.09
THBS3-202ENST00000428962 KCND1Q9NSA2 647 aa15.64■□□□□ 0.09
THBS3-202ENST00000428962 SERTAD1Q9UHV2 236 aa15.64■□□□□ 0.09
THBS3-202ENST00000428962 SERPINC1P01008 464 aa15.64■□□□□ 0.09
THBS3-202ENST00000428962 SFPQP23246 707 aaKnown RBP eCLIP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms