RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 RRP12Q5JTH9 1297 aaKnown RBP17.58■□□□□ 0.4
TMEM248-204ENST00000424964 FAM43AQ8N2R8 423 aa17.58■□□□□ 0.4
TMEM248-204ENST00000424964 ACER1Q8TDN7 264 aa17.58■□□□□ 0.4
TMEM248-204ENST00000424964 SAGE1Q9NXZ1 904 aa17.58■□□□□ 0.4
TMEM248-204ENST00000424964 TMOD4Q9NZQ9 345 aa17.58■□□□□ 0.4
TMEM248-204ENST00000424964 U3KPZ7 1027 aaPredicted RBP17.58■□□□□ 0.4
TMEM248-204ENST00000424964 RANBP6O60518 1105 aaKnown RBP17.57■□□□□ 0.4
TMEM248-204ENST00000424964 TBC1D8O95759 1140 aa17.57■□□□□ 0.4
TMEM248-204ENST00000424964 TSPY3P0CV98 308 aa17.57■□□□□ 0.4
TMEM248-204ENST00000424964 TSPY8P0CW00 308 aa17.57■□□□□ 0.4
TMEM248-204ENST00000424964 CTCFP49711 727 aaPredicted RBP17.57■□□□□ 0.4
TMEM248-204ENST00000424964 TFAP4Q01664 338 aa17.57■□□□□ 0.4
TMEM248-204ENST00000424964 ICA1Q05084 483 aa17.57■□□□□ 0.4
TMEM248-204ENST00000424964 MOGSQ13724 837 aa17.57■□□□□ 0.4
TMEM248-204ENST00000424964 ZYXQ15942 572 aaKnown RBP17.57■□□□□ 0.4
TMEM248-204ENST00000424964 FAM47AQ5JRC9 791 aa17.57■□□□□ 0.4
TMEM248-204ENST00000424964 AKNAD1Q5T1N1 836 aa17.57■□□□□ 0.4
TMEM248-204ENST00000424964 MFSD6Q6ZSS7 791 aa17.57■□□□□ 0.4
TMEM248-204ENST00000424964 CLEC10AQ8IUN9 316 aa17.57■□□□□ 0.4
TMEM248-204ENST00000424964 RNF41Q9H4P4 317 aaPredicted RBP17.57■□□□□ 0.4
TMEM248-204ENST00000424964 KANSL2Q9H9L4 492 aa17.57■□□□□ 0.4
TMEM248-204ENST00000424964 ARHGEF10LQ9HCE6 1279 aa17.57■□□□□ 0.4
TMEM248-204ENST00000424964 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.57■□□□□ 0.4
TMEM248-204ENST00000424964 TSPY2A6NKD2 308 aa17.56■□□□□ 0.4
TMEM248-204ENST00000424964 PDHXO00330 501 aa17.56■□□□□ 0.4
TMEM248-204ENST00000424964 ORC4O43929 436 aa17.56■□□□□ 0.4
TMEM248-204ENST00000424964 DGKZQ13574 1117 aa17.56■□□□□ 0.4
TMEM248-204ENST00000424964 TAF1CQ15572 869 aaPredicted RBP17.56■□□□□ 0.4
TMEM248-204ENST00000424964 SH3D19Q5HYK7 790 aa17.56■□□□□ 0.4
TMEM248-204ENST00000424964 GPAT2Q6NUI2 795 aa17.56■□□□□ 0.4
TMEM248-204ENST00000424964 USP17L2Q6R6M4 530 aa17.56■□□□□ 0.4
TMEM248-204ENST00000424964 ANKRD23Q86SG2 305 aa17.56■□□□□ 0.4
TMEM248-204ENST00000424964 TBC1D10CQ8IV04 446 aa17.56■□□□□ 0.4
TMEM248-204ENST00000424964 ANO2Q9NQ90 1003 aa17.56■□□□□ 0.4
TMEM248-204ENST00000424964 TACC3Q9Y6A5 838 aa17.56■□□□□ 0.4
TMEM248-204ENST00000424964 PCP11498 1178 aaKnown RBP17.55■□□□□ 0.4
TMEM248-204ENST00000424964 EEF2P13639 858 aaKnown RBP17.55■□□□□ 0.4
TMEM248-204ENST00000424964 USP14P54578 494 aa17.55■□□□□ 0.4
TMEM248-204ENST00000424964 PROCA1Q8NCQ7 364 aaPredicted RBP17.55■□□□□ 0.4
TMEM248-204ENST00000424964 NEDD1Q8NHV4 660 aa17.55■□□□□ 0.4
TMEM248-204ENST00000424964 STAG1Q8WVM7 1258 aa17.55■□□□□ 0.4
TMEM248-204ENST00000424964 MAP4K1Q92918 833 aa17.55■□□□□ 0.4
TMEM248-204ENST00000424964 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.55■□□□□ 0.4
TMEM248-204ENST00000424964 NBPF3Q9H094 633 aa17.55■□□□□ 0.4
TMEM248-204ENST00000424964 KIAA1683Q9H0B3 1180 aa17.55■□□□□ 0.4
TMEM248-204ENST00000424964 ZFYVE28Q9HCC9 887 aa17.55■□□□□ 0.4
TMEM248-204ENST00000424964 ZCCHC17Q9NP64 241 aaKnown RBP17.55■□□□□ 0.4
TMEM248-204ENST00000424964 AGTPBP1Q9UPW5 1226 aa17.55■□□□□ 0.4
TMEM248-204ENST00000424964 RBM8AQ9Y5S9 174 aaKnown RBP17.55■□□□□ 0.4
TMEM248-204ENST00000424964 LAMA4Q16363 1823 aa17.54■□□□□ 0.4
TMEM248-204ENST00000424964 A0A1W2PRG0 241 aa17.54■□□□□ 0.4
TMEM248-204ENST00000424964 FGRP09769 529 aa17.54■□□□□ 0.4
TMEM248-204ENST00000424964 HSPA8P11142 646 aaKnown RBP17.54■□□□□ 0.4
TMEM248-204ENST00000424964 LBX1P52954 281 aa17.54■□□□□ 0.4
TMEM248-204ENST00000424964 SIAH1Q8IUQ4 282 aa17.54■□□□□ 0.4
TMEM248-204ENST00000424964 LSG1Q9H089 658 aaKnown RBP17.54■□□□□ 0.4
TMEM248-204ENST00000424964 SH2D4AQ9H788 454 aa17.54■□□□□ 0.4
TMEM248-204ENST00000424964 EMILIN3Q9NT22 766 aa17.54■□□□□ 0.4
TMEM248-204ENST00000424964 PABPC4Q13310 644 aaKnown RBP eCLIP17.53■□□□□ 0.4
TMEM248-204ENST00000424964 CRHR2Q13324 411 aa17.53■□□□□ 0.4
TMEM248-204ENST00000424964 TREML2Q5T2D2 321 aa17.53■□□□□ 0.4
TMEM248-204ENST00000424964 CEP95Q96GE4 821 aa17.53■□□□□ 0.4
TMEM248-204ENST00000424964 R3HDMLQ9H3Y0 253 aa17.53■□□□□ 0.4
TMEM248-204ENST00000424964 CLIP2Q9UDT6 1046 aa17.53■□□□□ 0.4
TMEM248-204ENST00000424964 TMX2Q9Y320 296 aa17.53■□□□□ 0.4
TMEM248-204ENST00000424964 GTF3C3Q9Y5Q9 886 aa17.53■□□□□ 0.4
TMEM248-204ENST00000424964 IGKV6D-41A0A0C4DH26 115 aa17.52■□□□□ 0.4
TMEM248-204ENST00000424964 ESR2Q92731 530 aa17.52■□□□□ 0.4
TMEM248-204ENST00000424964 CFHR5Q9BXR6 569 aa17.52■□□□□ 0.4
TMEM248-204ENST00000424964 MTMR4Q9NYA4 1195 aa17.52■□□□□ 0.4
TMEM248-204ENST00000424964 NYAP2Q9P242 653 aa17.52■□□□□ 0.4
TMEM248-204ENST00000424964 SLC45A1Q9Y2W3 748 aa17.52■□□□□ 0.4
TMEM248-204ENST00000424964 GREB1LQ9C091 1923 aaPredicted RBP17.52■□□□□ 0.4
TMEM248-204ENST00000424964 NEDD4P46934 1319 aa17.51■□□□□ 0.39
TMEM248-204ENST00000424964 LOC285556D6RIA3 1793 aa17.51■□□□□ 0.39
TMEM248-204ENST00000424964 RAD21O60216 631 aa17.51■□□□□ 0.39
TMEM248-204ENST00000424964 TTLL1O95922 423 aa17.51■□□□□ 0.39
TMEM248-204ENST00000424964 CYP21A2P08686 494 aa17.51■□□□□ 0.39
TMEM248-204ENST00000424964 OSBPP22059 807 aa17.51■□□□□ 0.39
TMEM248-204ENST00000424964 PPP4R3BQ5MIZ7 849 aa17.51■□□□□ 0.39
TMEM248-204ENST00000424964 C12orf42Q96LP6 360 aa17.51■□□□□ 0.39
TMEM248-204ENST00000424964 PARK7Q99497 189 aaKnown RBP17.51■□□□□ 0.39
TMEM248-204ENST00000424964 CNNM2Q9H8M5 875 aa17.51■□□□□ 0.39
TMEM248-204ENST00000424964 PNMA3Q9UL41 463 aa17.51■□□□□ 0.39
TMEM248-204ENST00000424964 PLIN4Q96Q06 1357 aa17.51■□□□□ 0.39
TMEM248-204ENST00000424964 MYH4Q9Y623 1939 aa17.51■□□□□ 0.39
TMEM248-204ENST00000424964 B4E1Z4 1266 aa17.5■□□□□ 0.39
TMEM248-204ENST00000424964 GPR25O00155 361 aa17.5■□□□□ 0.39
TMEM248-204ENST00000424964 NMT2O60551 498 aa17.5■□□□□ 0.39
TMEM248-204ENST00000424964 CYP2C8P10632 490 aa17.5■□□□□ 0.39
TMEM248-204ENST00000424964 IRX3P78415 501 aaPredicted RBP17.5■□□□□ 0.39
TMEM248-204ENST00000424964 TRDNQ13061 729 aa17.5■□□□□ 0.39
TMEM248-204ENST00000424964 KRT23Q9C075 422 aa17.5■□□□□ 0.39
TMEM248-204ENST00000424964 VCPKMTQ9H867 229 aa17.5■□□□□ 0.39
TMEM248-204ENST00000424964 GOPCQ9HD26 462 aa17.5■□□□□ 0.39
TMEM248-204ENST00000424964 CASP8AP2Q9UKL3 1982 aa17.49■□□□□ 0.39
TMEM248-204ENST00000424964 USP17L15C9J2P7 530 aa17.49■□□□□ 0.39
TMEM248-204ENST00000424964 USP17L13C9JLJ4 530 aa17.49■□□□□ 0.39
TMEM248-204ENST00000424964 USP17L11C9JVI0 530 aa17.49■□□□□ 0.39
TMEM248-204ENST00000424964 USP17L18D6R9N7 530 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms