RNA–Protein interactions for RNA: ENST00000423902.6

CHD7-201, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD7, Length 11,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-201ENST00000423902 STX1AQ16623 288 aa9.45□□□□□ -0.9
CHD7-201ENST00000423902 GIMAP8Q8ND71 665 aaPredicted RBP9.45□□□□□ -0.9
CHD7-201ENST00000423902 TRIM47Q96LD4 638 aa9.45□□□□□ -0.9
CHD7-201ENST00000423902 SSX2IPQ9Y2D8 614 aa9.45□□□□□ -0.9
CHD7-201ENST00000423902 CDHR2Q9BYE9 1310 aa9.45□□□□□ -0.9
CHD7-201ENST00000423902 NEFHP12036 1026 aa9.44□□□□□ -0.9
CHD7-201ENST00000423902 USP17L2Q6R6M4 530 aa9.44□□□□□ -0.9
CHD7-201ENST00000423902 LRFN2Q9ULH4 789 aa9.44□□□□□ -0.9
CHD7-201ENST00000423902 PHKA1P46020 1223 aa9.44□□□□□ -0.9
CHD7-201ENST00000423902 IFI16Q16666 785 aaKnown RBP9.44□□□□□ -0.9
CHD7-201ENST00000423902 ATL3Q6DD88 541 aa9.44□□□□□ -0.9
CHD7-201ENST00000423902 PLEKHM2Q8IWE5 1019 aa9.44□□□□□ -0.9
CHD7-201ENST00000423902 NUP88Q99567 741 aaPredicted RBP9.44□□□□□ -0.9
CHD7-201ENST00000423902 PSTPIP2Q9H939 334 aa9.44□□□□□ -0.9
CHD7-201ENST00000423902 ZFYVE28Q9HCC9 887 aa9.44□□□□□ -0.9
CHD7-201ENST00000423902 DNM3Q9UQ16 869 aa9.44□□□□□ -0.9
CHD7-201ENST00000423902 MED23Q9ULK4 1368 aa9.44□□□□□ -0.9
CHD7-201ENST00000423902 NWD1Q149M9 1564 aa9.44□□□□□ -0.9
CHD7-201ENST00000423902 USO1O60763 962 aaKnown RBP9.44□□□□□ -0.9
CHD7-201ENST00000423902 PRDM1O75626 825 aa9.44□□□□□ -0.9
CHD7-201ENST00000423902 FOSP01100 380 aaPredicted RBP9.44□□□□□ -0.9
CHD7-201ENST00000423902 DDX19AQ9NUU7 478 aaKnown RBP9.44□□□□□ -0.9
CHD7-201ENST00000423902 CHMLP26374 656 aa9.44□□□□□ -0.9
CHD7-201ENST00000423902 ACTN2P35609 894 aa9.44□□□□□ -0.9
CHD7-201ENST00000423902 PROSER3Q2NL68 480 aa9.44□□□□□ -0.9
CHD7-201ENST00000423902 RILPL1Q5EBL4 403 aa9.44□□□□□ -0.9
CHD7-201ENST00000423902 STRIP1Q5VSL9 837 aa9.44□□□□□ -0.9
CHD7-201ENST00000423902 FBXO40Q9UH90 709 aa9.44□□□□□ -0.9
CHD7-201ENST00000423902 PCDHB15Q9Y5E8 787 aa9.44□□□□□ -0.9
CHD7-201ENST00000423902 KDM3AQ9Y4C1 1321 aa9.44□□□□□ -0.9
CHD7-201ENST00000423902 APOBRQ0VD83 1088 aa9.44□□□□□ -0.9
CHD7-201ENST00000423902 CTAGE1Q96RT6 745 aa9.44□□□□□ -0.9
CHD7-201ENST00000423902 NRBP2Q9NSY0 501 aa9.44□□□□□ -0.9
CHD7-201ENST00000423902 TMEM232C9JQI7 657 aa9.44□□□□□ -0.9
CHD7-201ENST00000423902 YEATS4O95619 227 aa9.44□□□□□ -0.9
CHD7-201ENST00000423902 EPB41P11171 864 aaKnown RBP9.44□□□□□ -0.9
CHD7-201ENST00000423902 ARID4AP29374 1257 aaPredicted RBP9.44□□□□□ -0.9
CHD7-201ENST00000423902 LRRC24Q50LG9 513 aa9.44□□□□□ -0.9
CHD7-201ENST00000423902 ANKRD26Q9UPS8 1709 aa9.44□□□□□ -0.9
CHD7-201ENST00000423902 RNF214Q8ND24 703 aa9.44□□□□□ -0.9
CHD7-201ENST00000423902 MINPP1Q9UNW1 487 aa9.44□□□□□ -0.9
CHD7-201ENST00000423902 GOLGA6L10A6NI86 522 aa9.44□□□□□ -0.9
CHD7-201ENST00000423902 TMEM179Q6ZVK1 233 aa9.44□□□□□ -0.9
CHD7-201ENST00000423902 HOOK3Q86VS8 718 aa9.44□□□□□ -0.9
CHD7-201ENST00000423902 LRRC47Q8N1G4 583 aaKnown RBP9.44□□□□□ -0.9
CHD7-201ENST00000423902 LINC00116Q8NCU8 138 aa9.44□□□□□ -0.9
CHD7-201ENST00000423902 AMNQ9BXJ7 453 aa9.44□□□□□ -0.9
CHD7-201ENST00000423902 ATP6V0A2Q9Y487 856 aa9.44□□□□□ -0.9
CHD7-201ENST00000423902 RPS6KB1P23443 525 aa9.43□□□□□ -0.9
CHD7-201ENST00000423902 SNAPC2Q13487 334 aa9.43□□□□□ -0.9
CHD7-201ENST00000423902 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.43□□□□□ -0.91e-6■■■□□ 18
CHD7-201ENST00000423902 PTPRUQ92729 1446 aa9.43□□□□□ -0.9
CHD7-201ENST00000423902 ABCC4O15439 1325 aa9.43□□□□□ -0.9
CHD7-201ENST00000423902 IQUBQ8NA54 791 aa9.43□□□□□ -0.9
CHD7-201ENST00000423902 MMRN2Q9H8L6 949 aa9.43□□□□□ -0.9
CHD7-201ENST00000423902 PNMA6EA0A0J9YXQ4 647 aa9.43□□□□□ -0.9
CHD7-201ENST00000423902 DDAH1O94760 285 aa9.43□□□□□ -0.9
CHD7-201ENST00000423902 PARK7Q99497 189 aaKnown RBP9.43□□□□□ -0.9
CHD7-201ENST00000423902 ARHGEF37A1IGU5 675 aa9.43□□□□□ -0.9
CHD7-201ENST00000423902 CALUO43852 315 aaPredicted RBP9.43□□□□□ -0.9
CHD7-201ENST00000423902 BMP3P12645 472 aa9.43□□□□□ -0.9
CHD7-201ENST00000423902 MIGA2Q7L4E1 593 aa9.43□□□□□ -0.9
CHD7-201ENST00000423902 TNS2Q63HR2 1409 aa9.43□□□□□ -0.9
CHD7-201ENST00000423902 RPAP1Q9BWH6 1393 aaPredicted RBP9.43□□□□□ -0.9
CHD7-201ENST00000423902 ROBO1Q9Y6N7 1651 aa9.43□□□□□ -0.9
CHD7-201ENST00000423902 YARSP54577 528 aaKnown RBP9.43□□□□□ -0.9
CHD7-201ENST00000423902 TBC1D2Q9BYX2 928 aa9.43□□□□□ -0.9
CHD7-201ENST00000423902 MTIF3Q9H2K0 278 aaKnown RBP9.43□□□□□ -0.9
CHD7-201ENST00000423902 ABCD1P33897 745 aa9.43□□□□□ -0.9
CHD7-201ENST00000423902 V9GY48 417 aaPredicted RBP9.43□□□□□ -0.9
CHD7-201ENST00000423902 FRMPD2Q68DX3 1309 aaPredicted RBP9.43□□□□□ -0.9
CHD7-201ENST00000423902 RBM46Q8TBY0 533 aaKnown RBP9.43□□□□□ -0.9
CHD7-201ENST00000423902 SDR42E1Q8WUS8 393 aa9.43□□□□□ -0.9
CHD7-201ENST00000423902 RPS6KC1Q96S38 1066 aa9.43□□□□□ -0.9
CHD7-201ENST00000423902 FAM47AQ5JRC9 791 aa9.43□□□□□ -0.9
CHD7-201ENST00000423902 PNMA1Q8ND90 353 aa9.43□□□□□ -0.9
CHD7-201ENST00000423902 PCDHA1Q9Y5I3 950 aa9.43□□□□□ -0.9
CHD7-201ENST00000423902 ZHX2Q9Y6X8 837 aa9.43□□□□□ -0.9
CHD7-201ENST00000423902 NONOQ15233 471 aaKnown RBP eCLIP9.42□□□□□ -0.92e-7■■■□□ 18.8
CHD7-201ENST00000423902 SSH3Q8TE77 659 aa9.42□□□□□ -0.9
CHD7-201ENST00000423902 USP17L5A8MUK1 530 aa9.42□□□□□ -0.9
CHD7-201ENST00000423902 DPH6Q7L8W6 267 aa9.42□□□□□ -0.9
CHD7-201ENST00000423902 DEPTORQ8TB45 409 aa9.42□□□□□ -0.9
CHD7-201ENST00000423902 DDX39AO00148 427 aaKnown RBP9.42□□□□□ -0.9
CHD7-201ENST00000423902 CCDC129Q6ZRS4 1044 aa9.42□□□□□ -0.9
CHD7-201ENST00000423902 FNBP4Q8N3X1 1017 aaPredicted RBP9.42□□□□□ -0.9
CHD7-201ENST00000423902 NCAPH2Q6IBW4 605 aa9.42□□□□□ -0.9
CHD7-201ENST00000423902 TTLL11Q8NHH1 800 aa9.42□□□□□ -0.9
CHD7-201ENST00000423902 MIER3Q7Z3K6 550 aa9.42□□□□□ -0.9
CHD7-201ENST00000423902 MICALL2Q8IY33 904 aa9.42□□□□□ -0.9
CHD7-201ENST00000423902 MRVI1Q9Y6F6 885 aa9.42□□□□□ -0.9
CHD7-201ENST00000423902 ATF7P17544 494 aaPredicted RBP9.42□□□□□ -0.9
CHD7-201ENST00000423902 TFDP1Q14186 410 aa9.42□□□□□ -0.9
CHD7-201ENST00000423902 ZBED2Q9BTP6 218 aa9.42□□□□□ -0.9
CHD7-201ENST00000423902 NT5C3AQ9H0P0 336 aa9.42□□□□□ -0.9
CHD7-201ENST00000423902 CD209Q9NNX6 404 aa9.42□□□□□ -0.9
CHD7-201ENST00000423902 HERC5Q9UII4 1024 aaKnown RBP9.42□□□□□ -0.9
CHD7-201ENST00000423902 MARCKSP29966 332 aaPredicted RBP9.42□□□□□ -0.9
CHD7-201ENST00000423902 TICAM2Q86XR7 235 aa9.42□□□□□ -0.9
CHD7-201ENST00000423902 ZHX1Q9UKY1 873 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms