RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 A0A0U1RQJ8 604 aa18.02■□□□□ 0.47
CDH1-202ENST00000422392 TRIM75PA6NK02 468 aa18.02■□□□□ 0.47
CDH1-202ENST00000422392 TUBB4AP04350 444 aa18.02■□□□□ 0.47
CDH1-202ENST00000422392 PLCD1P51178 756 aa18.02■□□□□ 0.47
CDH1-202ENST00000422392 TERF2Q15554 542 aa18.02■□□□□ 0.47
CDH1-202ENST00000422392 ZNF174Q15697 407 aa18.02■□□□□ 0.47
CDH1-202ENST00000422392 NUTM2AQ8IVF1 878 aaPredicted RBP18.02■□□□□ 0.47
CDH1-202ENST00000422392 ATRIPQ8WXE1 791 aa18.02■□□□□ 0.47
CDH1-202ENST00000422392 ESR2Q92731 530 aa18.02■□□□□ 0.47
CDH1-202ENST00000422392 CCDC87Q9NVE4 849 aa18.02■□□□□ 0.47
CDH1-202ENST00000422392 DACH1Q9UI36 760 aa18.02■□□□□ 0.47
CDH1-202ENST00000422392 CEP131Q9UPN4 1083 aa18.02■□□□□ 0.47
CDH1-202ENST00000422392 STX10O60499 249 aa18.01■□□□□ 0.47
CDH1-202ENST00000422392 TADA3O75528 432 aa18.01■□□□□ 0.47
CDH1-202ENST00000422392 SEC31AO94979 1220 aaKnown RBP18.01■□□□□ 0.47
CDH1-202ENST00000422392 CAMTA2O94983 1202 aa18.01■□□□□ 0.47
CDH1-202ENST00000422392 NTSR2O95665 410 aa18.01■□□□□ 0.47
CDH1-202ENST00000422392 NR1I3Q14994 352 aa18.01■□□□□ 0.47
CDH1-202ENST00000422392 RNF26Q9BY78 433 aaPredicted RBP18.01■□□□□ 0.47
CDH1-202ENST00000422392 COL1A1P02452 1464 aaPredicted RBP18.01■□□□□ 0.47
CDH1-202ENST00000422392 SOWAHDA6NJG2 315 aa18.01■□□□□ 0.47
CDH1-202ENST00000422392 FCHSD1Q86WN1 690 aa18.01■□□□□ 0.47
CDH1-202ENST00000422392 SPATA20Q8TB22 786 aa18.01■□□□□ 0.47
CDH1-202ENST00000422392 AK7Q96M32 723 aa18.01■□□□□ 0.47
CDH1-202ENST00000422392 ZSCAN10Q96SZ4 725 aaPredicted RBP18.01■□□□□ 0.47
CDH1-202ENST00000422392 NMT2O60551 498 aa18■□□□□ 0.47
CDH1-202ENST00000422392 KRT2P35908 639 aa18■□□□□ 0.47
CDH1-202ENST00000422392 FUT2Q10981 343 aa18■□□□□ 0.47
CDH1-202ENST00000422392 IFIT1BQ5T764 474 aaKnown RBP18■□□□□ 0.47
CDH1-202ENST00000422392 C3orf67Q6ZVT6 689 aa18■□□□□ 0.47
CDH1-202ENST00000422392 RIOK1Q9BRS2 568 aaKnown RBP18■□□□□ 0.47
CDH1-202ENST00000422392 PHF20Q9BVI0 1012 aa18■□□□□ 0.47
CDH1-202ENST00000422392 MRPL44Q9H9J2 332 aaKnown RBP18■□□□□ 0.47
CDH1-202ENST00000422392 CASQ1P31415 396 aa18■□□□□ 0.47
CDH1-202ENST00000422392 PAGE5Q96GU1 130 aa18■□□□□ 0.47
CDH1-202ENST00000422392 CACNA1SQ13698 1873 aa18■□□□□ 0.47
CDH1-202ENST00000422392 PNMA6AP0CW24 399 aaPredicted RBP17.99■□□□□ 0.47
CDH1-202ENST00000422392 ITPK1Q13572 414 aa17.99■□□□□ 0.47
CDH1-202ENST00000422392 APTXQ7Z2E3 356 aaKnown RBP17.99■□□□□ 0.47
CDH1-202ENST00000422392 TRIML1Q8N9V2 468 aa17.99■□□□□ 0.47
CDH1-202ENST00000422392 ZNF384Q8TF68 577 aa17.99■□□□□ 0.47
CDH1-202ENST00000422392 BCL9LQ86UU0 1499 aa17.99■□□□□ 0.47
CDH1-202ENST00000422392 A0A1B0GTH6 734 aa17.99■□□□□ 0.47
CDH1-202ENST00000422392 ADAMTS3O15072 1205 aa17.99■□□□□ 0.47
CDH1-202ENST00000422392 BMS1Q14692 1282 aaKnown RBP17.99■□□□□ 0.47
CDH1-202ENST00000422392 SLC4A8Q2Y0W8 1093 aa17.99■□□□□ 0.47
CDH1-202ENST00000422392 KANK3Q6NY19 840 aa17.99■□□□□ 0.47
CDH1-202ENST00000422392 AATFQ9NY61 560 aaKnown RBP eCLIP17.99■□□□□ 0.47
CDH1-202ENST00000422392 SYNRGQ9UMZ2 1314 aa17.99■□□□□ 0.47
CDH1-202ENST00000422392 RTL9Q8NET4 1388 aa17.98■□□□□ 0.47
CDH1-202ENST00000422392 VEGFAP15692 232 aaPredicted RBP17.98■□□□□ 0.47
CDH1-202ENST00000422392 RBL2Q08999 1139 aa17.98■□□□□ 0.47
CDH1-202ENST00000422392 BLZF1Q9H2G9 400 aa17.98■□□□□ 0.47
CDH1-202ENST00000422392 LZTFL1Q9NQ48 299 aa17.98■□□□□ 0.47
CDH1-202ENST00000422392 DUOX1Q9NRD9 1551 aa17.98■□□□□ 0.47
CDH1-202ENST00000422392 DPYDQ12882 1025 aa17.98■□□□□ 0.47
CDH1-202ENST00000422392 KIFC2Q96AC6 838 aa17.98■□□□□ 0.47
CDH1-202ENST00000422392 STRCQ7RTU9 1775 aa17.98■□□□□ 0.47
CDH1-202ENST00000422392 EFCAB8A8MWE9 144 aa17.97■□□□□ 0.47
CDH1-202ENST00000422392 XBP1P17861 261 aa17.97■□□□□ 0.47
CDH1-202ENST00000422392 TROAPQ12815 778 aa17.97■□□□□ 0.47
CDH1-202ENST00000422392 CUL4BQ13620 913 aa17.97■□□□□ 0.47
CDH1-202ENST00000422392 NPY5RQ15761 445 aa17.97■□□□□ 0.47
CDH1-202ENST00000422392 TEX35Q5T0J7 233 aa17.97■□□□□ 0.47
CDH1-202ENST00000422392 CATIPQ7Z7H3 387 aa17.97■□□□□ 0.47
CDH1-202ENST00000422392 ERCC5P28715 1186 aaPredicted RBP17.97■□□□□ 0.47
CDH1-202ENST00000422392 PLA2G4AP47712 749 aa17.97■□□□□ 0.47
CDH1-202ENST00000422392 RCAN1P53805 252 aa17.97■□□□□ 0.47
CDH1-202ENST00000422392 PTGDRQ13258 359 aa17.97■□□□□ 0.47
CDH1-202ENST00000422392 RAD9BQ6WBX8 426 aa17.97■□□□□ 0.47
CDH1-202ENST00000422392 IGSF22Q8N9C0 903 aa17.97■□□□□ 0.47
CDH1-202ENST00000422392 MTA3Q9BTC8 594 aa17.97■□□□□ 0.47
CDH1-202ENST00000422392 ZSWIM4Q9H7M6 989 aa17.97■□□□□ 0.47
CDH1-202ENST00000422392 ANAPC4Q9UJX5 808 aa17.97■□□□□ 0.47
CDH1-202ENST00000422392 LOC102724428A0A0B4J2F2 783 aa17.96■□□□□ 0.47
CDH1-202ENST00000422392 AKR1B15C9JRZ8 316 aaPredicted RBP17.96■□□□□ 0.47
CDH1-202ENST00000422392 PRPF3O43395 683 aaKnown RBP17.96■□□□□ 0.47
CDH1-202ENST00000422392 ZRANB2O95218 330 aaKnown RBP eCLIP17.96■□□□□ 0.47
CDH1-202ENST00000422392 SIK1P57059 783 aa17.96■□□□□ 0.47
CDH1-202ENST00000422392 MAP3K9P80192 1104 aa17.96■□□□□ 0.47
CDH1-202ENST00000422392 FAM47AQ5JRC9 791 aa17.96■□□□□ 0.47
CDH1-202ENST00000422392 TMCO3Q6UWJ1 677 aa17.96■□□□□ 0.47
CDH1-202ENST00000422392 SMIM5Q71RC9 77 aa17.96■□□□□ 0.47
CDH1-202ENST00000422392 CCDC12Q8WUD4 166 aaPredicted RBP17.96■□□□□ 0.47
CDH1-202ENST00000422392 SRRTQ9BXP5 876 aaKnown RBP17.96■□□□□ 0.47
CDH1-202ENST00000422392 MRFAP1Q9Y605 127 aa17.96■□□□□ 0.47
CDH1-202ENST00000422392 USP17L12C9JPN9 530 aa17.96■□□□□ 0.47
CDH1-202ENST00000422392 USP17L21D6R901 530 aa17.96■□□□□ 0.47
CDH1-202ENST00000422392 KLRK1P26718 216 aa17.96■□□□□ 0.47
CDH1-202ENST00000422392 CCT6AP40227 531 aaKnown RBP17.96■□□□□ 0.47
CDH1-202ENST00000422392 PPP2R3AQ06190 1150 aa17.96■□□□□ 0.47
CDH1-202ENST00000422392 PARP10Q53GL7 1025 aa17.96■□□□□ 0.47
CDH1-202ENST00000422392 SPATA1Q5VX52 437 aa17.96■□□□□ 0.47
CDH1-202ENST00000422392 SH3RF1Q7Z6J0 888 aa17.96■□□□□ 0.47
CDH1-202ENST00000422392 CREBRFQ8IUR6 639 aa17.96■□□□□ 0.47
CDH1-202ENST00000422392 CTNND2Q9UQB3 1225 aa17.96■□□□□ 0.47
CDH1-202ENST00000422392 ZNF804BA4D1E1 1349 aa17.96■□□□□ 0.47
CDH1-202ENST00000422392 PPP1R3GB7ZBB8 358 aa17.95■□□□□ 0.46
CDH1-202ENST00000422392 ERFEQ4G0M1 354 aa17.95■□□□□ 0.46
CDH1-202ENST00000422392 CTR9Q6PD62 1173 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms