RNA–Protein interactions for RNA: ENST00000420296.1

NDUFA3-207, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-207ENST00000420296 PABPC4Q13310 644 aaKnown RBP eCLIP11.04□□□□□ -0.641e-14■■■■□ 22.9
NDUFA3-207ENST00000420296 RAB3GAP1Q15042 981 aa11.04□□□□□ -0.64
NDUFA3-207ENST00000420296 SLC9C2Q5TAH2 1124 aa11.04□□□□□ -0.64
NDUFA3-207ENST00000420296 CHRDL2Q6WN34 429 aa11.04□□□□□ -0.64
NDUFA3-207ENST00000420296 CLEC10AQ8IUN9 316 aa11.04□□□□□ -0.64
NDUFA3-207ENST00000420296 RPAP2Q8IXW5 612 aaPredicted RBP11.04□□□□□ -0.64
NDUFA3-207ENST00000420296 PXYLP1Q8TE99 480 aa11.04□□□□□ -0.64
NDUFA3-207ENST00000420296 TRIB2Q92519 343 aa11.04□□□□□ -0.64
NDUFA3-207ENST00000420296 DPF3Q92784 378 aa11.04□□□□□ -0.64
NDUFA3-207ENST00000420296 TBC1D2Q9BYX2 928 aa11.04□□□□□ -0.64
NDUFA3-207ENST00000420296 ARMT1Q9H993 441 aa11.04□□□□□ -0.64
NDUFA3-207ENST00000420296 PAK6Q9NQU5 681 aaPredicted RBP11.04□□□□□ -0.64
NDUFA3-207ENST00000420296 RBPJLQ9UBG7 517 aa11.04□□□□□ -0.64
NDUFA3-207ENST00000420296 MORF4L1Q9UBU8 362 aa11.04□□□□□ -0.64
NDUFA3-207ENST00000420296 SERPINB13Q9UIV8 391 aa11.04□□□□□ -0.64
NDUFA3-207ENST00000420296 PLXNA1Q9UIW2 1896 aa11.04□□□□□ -0.64
NDUFA3-207ENST00000420296 GREB1LQ9C091 1923 aaPredicted RBP11.03□□□□□ -0.64
NDUFA3-207ENST00000420296 CYP2D7A0A087X1C5 515 aa11.03□□□□□ -0.64
NDUFA3-207ENST00000420296 PRKAB2O43741 272 aa11.03□□□□□ -0.64
NDUFA3-207ENST00000420296 CNMDO75829 334 aa11.03□□□□□ -0.64
NDUFA3-207ENST00000420296 HOXA7P31268 230 aaPredicted RBP11.03□□□□□ -0.64
NDUFA3-207ENST00000420296 CCL14Q16627 93 aa11.03□□□□□ -0.64
NDUFA3-207ENST00000420296 TATDN1Q6P1N9 297 aa11.03□□□□□ -0.64
NDUFA3-207ENST00000420296 GCC1Q96CN9 775 aa11.03□□□□□ -0.64
NDUFA3-207ENST00000420296 KIF1BPQ96EK5 621 aa11.03□□□□□ -0.64
NDUFA3-207ENST00000420296 DYNLL2Q96FJ2 89 aa11.03□□□□□ -0.64
NDUFA3-207ENST00000420296 FEZ1Q99689 392 aa11.03□□□□□ -0.64
NDUFA3-207ENST00000420296 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.03□□□□□ -0.64
NDUFA3-207ENST00000420296 BOLA2Q9H3K6 86 aa11.03□□□□□ -0.64
NDUFA3-207ENST00000420296 LAMA3Q16787 3333 aa11.03□□□□□ -0.64
NDUFA3-207ENST00000420296 TFRCP02786 760 aaKnown RBP11.02□□□□□ -0.65
NDUFA3-207ENST00000420296 HMGCRP04035 888 aa11.02□□□□□ -0.65
NDUFA3-207ENST00000420296 IFIT2P09913 472 aaKnown RBP11.02□□□□□ -0.65
NDUFA3-207ENST00000420296 VCAM1P19320 739 aa11.02□□□□□ -0.65
NDUFA3-207ENST00000420296 ERVK-9P63128 1117 aa11.02□□□□□ -0.65
NDUFA3-207ENST00000420296 ERVK-24P63145 666 aa11.02□□□□□ -0.65
NDUFA3-207ENST00000420296 GABPAQ06546 454 aa11.02□□□□□ -0.65
NDUFA3-207ENST00000420296 SEPT2Q15019 361 aa11.02□□□□□ -0.65
NDUFA3-207ENST00000420296 ABCB5Q2M3G0 1257 aa11.02□□□□□ -0.65
NDUFA3-207ENST00000420296 CERKLQ49MI3 558 aaPredicted RBP11.02□□□□□ -0.65
NDUFA3-207ENST00000420296 KIAA1755Q5JYT7 1200 aa11.02□□□□□ -0.65
NDUFA3-207ENST00000420296 USP17L2Q6R6M4 530 aa11.02□□□□□ -0.65
NDUFA3-207ENST00000420296 CLASRPQ8N2M8 674 aaKnown RBP11.02□□□□□ -0.65
NDUFA3-207ENST00000420296 NKX2-3Q8TAU0 364 aa11.02□□□□□ -0.65
NDUFA3-207ENST00000420296 PAWRQ96IZ0 340 aaKnown RBP11.02□□□□□ -0.65
NDUFA3-207ENST00000420296 CRISPLD2Q9H0B8 497 aa11.02□□□□□ -0.65
NDUFA3-207ENST00000420296 EHD4Q9H223 541 aa11.02□□□□□ -0.65
NDUFA3-207ENST00000420296 ZNF236Q9UL36 1845 aa11.01□□□□□ -0.65
NDUFA3-207ENST00000420296 A0A1W2PRG0 241 aa11.01□□□□□ -0.65
NDUFA3-207ENST00000420296 C19orf81C9J6K1 198 aa11.01□□□□□ -0.65
NDUFA3-207ENST00000420296 MBD4O95243 580 aa11.01□□□□□ -0.65
NDUFA3-207ENST00000420296 POLR3DP05423 398 aaPredicted RBP11.01□□□□□ -0.65
NDUFA3-207ENST00000420296 MNX1P50219 401 aaPredicted RBP11.01□□□□□ -0.65
NDUFA3-207ENST00000420296 HSP90AB4PQ58FF6 505 aa11.01□□□□□ -0.65
NDUFA3-207ENST00000420296 TSHZ3Q63HK5 1081 aa11.01□□□□□ -0.65
NDUFA3-207ENST00000420296 GPR142Q7Z601 462 aa11.01□□□□□ -0.65
NDUFA3-207ENST00000420296 GPRC5AQ8NFJ5 357 aa11.01□□□□□ -0.65
NDUFA3-207ENST00000420296 CRNKL1Q9BZJ0 848 aaKnown RBP11.01□□□□□ -0.65
NDUFA3-207ENST00000420296 DCP1AQ9NPI6 582 aaPredicted RBP11.01□□□□□ -0.65
NDUFA3-207ENST00000420296 PAG1Q9NWQ8 432 aa11.01□□□□□ -0.65
NDUFA3-207ENST00000420296 MCM9Q9NXL9 1143 aa11.01□□□□□ -0.65
NDUFA3-207ENST00000420296 RBM27Q9P2N5 1060 aaKnown RBP11.01□□□□□ -0.65
NDUFA3-207ENST00000420296 MPHOSPH10O00566 681 aaKnown RBP11□□□□□ -0.65
NDUFA3-207ENST00000420296 HMMRO75330 724 aa11□□□□□ -0.65
NDUFA3-207ENST00000420296 PRKAR2AP13861 404 aaKnown RBP11□□□□□ -0.65
NDUFA3-207ENST00000420296 CCND3P30281 292 aaPredicted RBP11□□□□□ -0.65
NDUFA3-207ENST00000420296 ADD2P35612 726 aa11□□□□□ -0.65
NDUFA3-207ENST00000420296 TTF1Q15361 905 aaPredicted RBP11□□□□□ -0.65
NDUFA3-207ENST00000420296 TTC6Q86TZ1 520 aa11□□□□□ -0.65
NDUFA3-207ENST00000420296 SMC5Q8IY18 1101 aa11□□□□□ -0.65
NDUFA3-207ENST00000420296 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11□□□□□ -0.65
NDUFA3-207ENST00000420296 C12orf42Q96LP6 360 aa11□□□□□ -0.65
NDUFA3-207ENST00000420296 RPAP3Q9H6T3 665 aaPredicted RBP11□□□□□ -0.65
NDUFA3-207ENST00000420296 GINM1Q9NU53 330 aa11□□□□□ -0.65
NDUFA3-207ENST00000420296 BTBD7Q9P203 1132 aa11□□□□□ -0.65
NDUFA3-207ENST00000420296 LAMA2P24043 3122 aaKnown RBP11□□□□□ -0.65
NDUFA3-207ENST00000420296 SMCHD1A6NHR9 2005 aa10.99□□□□□ -0.65
NDUFA3-207ENST00000420296 SPDYE16A6NNV3 312 aaPredicted RBP10.99□□□□□ -0.65
NDUFA3-207ENST00000420296 AKR1B1P15121 316 aa10.99□□□□□ -0.65
NDUFA3-207ENST00000420296 CACNB2Q08289 660 aaPredicted RBP10.99□□□□□ -0.65
NDUFA3-207ENST00000420296 MORN1Q5T089 497 aa10.99□□□□□ -0.65
NDUFA3-207ENST00000420296 MAP3K21Q5TCX8 1036 aa10.99□□□□□ -0.65
NDUFA3-207ENST00000420296 WDR78Q5VTH9 848 aa10.99□□□□□ -0.65
NDUFA3-207ENST00000420296 CATSPERGQ6ZRH7 1159 aa10.99□□□□□ -0.65
NDUFA3-207ENST00000420296 USP6NLQ92738 828 aa10.99□□□□□ -0.65
NDUFA3-207ENST00000420296 KIAA1683Q9H0B3 1180 aa10.99□□□□□ -0.65
NDUFA3-207ENST00000420296 FLRT1Q9NZU1 646 aa10.99□□□□□ -0.65
NDUFA3-207ENST00000420296 MCM3APO60318 1980 aa10.98□□□□□ -0.65
NDUFA3-207ENST00000420296 USP17L15C9J2P7 530 aa10.98□□□□□ -0.65
NDUFA3-207ENST00000420296 USP17L13C9JLJ4 530 aa10.98□□□□□ -0.65
NDUFA3-207ENST00000420296 USP17L11C9JVI0 530 aa10.98□□□□□ -0.65
NDUFA3-207ENST00000420296 USP17L18D6R9N7 530 aa10.98□□□□□ -0.65
NDUFA3-207ENST00000420296 USP17L22D6RA61 530 aa10.98□□□□□ -0.65
NDUFA3-207ENST00000420296 USP17L17D6RBQ6 530 aa10.98□□□□□ -0.65
NDUFA3-207ENST00000420296 USP17L19D6RCP7 530 aa10.98□□□□□ -0.65
NDUFA3-207ENST00000420296 USP17L20D6RJB6 530 aa10.98□□□□□ -0.65
NDUFA3-207ENST00000420296 IGSF3O75054 1194 aa10.98□□□□□ -0.65
NDUFA3-207ENST00000420296 RAB11FIP3O75154 756 aa10.98□□□□□ -0.65
NDUFA3-207ENST00000420296 ZKSCAN1P17029 563 aaPredicted RBP10.98□□□□□ -0.65
NDUFA3-207ENST00000420296 ATP5JP18859 108 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms