RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 CCDC42Q96M95 316 aa9.48□□□□□ -0.89
UBR4-206ENST00000419533 DSCC1Q9BVC3 393 aa9.48□□□□□ -0.89
UBR4-206ENST00000419533 KCNG1Q9UIX4 513 aa9.48□□□□□ -0.89
UBR4-206ENST00000419533 XDHP47989 1333 aa9.47□□□□□ -0.89
UBR4-206ENST00000419533 KDM2BQ8NHM5 1336 aa9.47□□□□□ -0.89
UBR4-206ENST00000419533 IFT172Q9UG01 1749 aa9.47□□□□□ -0.89
UBR4-206ENST00000419533 TFAP4Q01664 338 aa9.47□□□□□ -0.89
UBR4-206ENST00000419533 NLRX1Q86UT6 975 aa9.47□□□□□ -0.89
UBR4-206ENST00000419533 SULF1Q8IWU6 871 aa9.47□□□□□ -0.89
UBR4-206ENST00000419533 KIFAP3Q92845 792 aa9.47□□□□□ -0.89
UBR4-206ENST00000419533 PRIMPOLQ96LW4 560 aa9.47□□□□□ -0.89
UBR4-206ENST00000419533 BRIP1Q9BX63 1249 aa9.47□□□□□ -0.89
UBR4-206ENST00000419533 DNAJC25Q9H1X3 360 aa9.47□□□□□ -0.89
UBR4-206ENST00000419533 CGNQ9P2M7 1197 aaKnown RBP9.47□□□□□ -0.89
UBR4-206ENST00000419533 MRPS9P82933 396 aaKnown RBP9.47□□□□□ -0.89
UBR4-206ENST00000419533 HSP90AA4PQ58FG1 418 aa9.47□□□□□ -0.89
UBR4-206ENST00000419533 CCDC155Q8N6L0 562 aa9.47□□□□□ -0.89
UBR4-206ENST00000419533 ERICH4A6NGS2 130 aa9.47□□□□□ -0.89
UBR4-206ENST00000419533 ATP2A1O14983 1001 aa9.47□□□□□ -0.89
UBR4-206ENST00000419533 PPARAQ07869 468 aa9.47□□□□□ -0.89
UBR4-206ENST00000419533 UBE4AQ14139 1066 aa9.47□□□□□ -0.89
UBR4-206ENST00000419533 NCAPH2Q6IBW4 605 aa9.47□□□□□ -0.89
UBR4-206ENST00000419533 TRIM6Q9C030 488 aaPredicted RBP9.47□□□□□ -0.89
UBR4-206ENST00000419533 LEMD3Q9Y2U8 911 aa9.47□□□□□ -0.89
UBR4-206ENST00000419533 PNMA6EA0A0J9YXQ4 647 aa9.47□□□□□ -0.89
UBR4-206ENST00000419533 KRT86O43790 486 aa9.47□□□□□ -0.89
UBR4-206ENST00000419533 ARID5AQ03989 594 aa9.47□□□□□ -0.89
UBR4-206ENST00000419533 KIF5AQ12840 1032 aa9.47□□□□□ -0.89
UBR4-206ENST00000419533 DCAF17Q5H9S7 520 aaPredicted RBP9.47□□□□□ -0.89
UBR4-206ENST00000419533 MAATS1Q7Z4T9 603 aa9.47□□□□□ -0.89
UBR4-206ENST00000419533 TRAF5O00463 557 aa9.46□□□□□ -0.89
UBR4-206ENST00000419533 SGSM2O43147 1006 aa9.46□□□□□ -0.89
UBR4-206ENST00000419533 HARSP12081 509 aaKnown RBP9.46□□□□□ -0.89
UBR4-206ENST00000419533 TXKP42681 527 aa9.46□□□□□ -0.89
UBR4-206ENST00000419533 SNX16P57768 344 aa9.46□□□□□ -0.89
UBR4-206ENST00000419533 TRPC3Q13507 836 aa9.46□□□□□ -0.89
UBR4-206ENST00000419533 USH1GQ495M9 461 aa9.46□□□□□ -0.89
UBR4-206ENST00000419533 ERFEQ4G0M1 354 aa9.46□□□□□ -0.89
UBR4-206ENST00000419533 TTC38Q5R3I4 469 aa9.46□□□□□ -0.89
UBR4-206ENST00000419533 FAM227BQ96M60 508 aa9.46□□□□□ -0.89
UBR4-206ENST00000419533 GJC1P36383 396 aa9.46□□□□□ -0.89
UBR4-206ENST00000419533 PSMD1Q99460 953 aa9.46□□□□□ -0.89
UBR4-206ENST00000419533 COL14A1Q05707 1796 aaKnown RBP9.46□□□□□ -0.89
UBR4-206ENST00000419533 STX10O60499 249 aa9.46□□□□□ -0.9
UBR4-206ENST00000419533 CFBP00751 764 aa9.46□□□□□ -0.9
UBR4-206ENST00000419533 TUBB4AP04350 444 aa9.46□□□□□ -0.9
UBR4-206ENST00000419533 PDE4DQ08499 809 aa9.46□□□□□ -0.9
UBR4-206ENST00000419533 GNPTABQ3T906 1256 aa9.46□□□□□ -0.9
UBR4-206ENST00000419533 CEP135Q66GS9 1140 aa9.46□□□□□ -0.9
UBR4-206ENST00000419533 CCDC50Q8IVM0 306 aa9.46□□□□□ -0.9
UBR4-206ENST00000419533 CCDC77Q9BR77 488 aa9.46□□□□□ -0.9
UBR4-206ENST00000419533 CALCOCO1Q9P1Z2 691 aa9.46□□□□□ -0.9
UBR4-206ENST00000419533 PAXBP1Q9Y5B6 917 aa9.46□□□□□ -0.9
UBR4-206ENST00000419533 LPXNO60711 386 aa9.46□□□□□ -0.9
UBR4-206ENST00000419533 CCDC175P0C221 793 aa9.46□□□□□ -0.9
UBR4-206ENST00000419533 SYT1P21579 422 aa9.46□□□□□ -0.9
UBR4-206ENST00000419533 STX17P56962 302 aa9.46□□□□□ -0.9
UBR4-206ENST00000419533 ANO1Q5XXA6 986 aa9.46□□□□□ -0.9
UBR4-206ENST00000419533 GSTA5Q7RTV2 222 aa9.46□□□□□ -0.9
UBR4-206ENST00000419533 PPP1R14CQ8TAE6 165 aa9.46□□□□□ -0.9
UBR4-206ENST00000419533 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.46□□□□□ -0.9
UBR4-206ENST00000419533 KIFC2Q96AC6 838 aa9.46□□□□□ -0.9
UBR4-206ENST00000419533 RNF181Q9P0P0 153 aa9.46□□□□□ -0.9
UBR4-206ENST00000419533 SNX14Q9Y5W7 946 aa9.46□□□□□ -0.9
UBR4-206ENST00000419533 AHDC1Q5TGY3 1603 aaPredicted RBP9.46□□□□□ -0.9
UBR4-206ENST00000419533 IQCA1LA6NCM1 817 aa9.45□□□□□ -0.9
UBR4-206ENST00000419533 TYRO3Q06418 890 aa9.45□□□□□ -0.9
UBR4-206ENST00000419533 GRAPQ13588 217 aa9.45□□□□□ -0.9
UBR4-206ENST00000419533 C8orf34Q49A92 452 aa9.45□□□□□ -0.9
UBR4-206ENST00000419533 OTUD7BQ6GQQ9 843 aa9.45□□□□□ -0.9
UBR4-206ENST00000419533 DIS3L2Q8IYB7 885 aaKnown RBP9.45□□□□□ -0.9
UBR4-206ENST00000419533 HACE1Q8IYU2 909 aa9.45□□□□□ -0.9
UBR4-206ENST00000419533 OTUD6BQ8N6M0 293 aa9.45□□□□□ -0.9
UBR4-206ENST00000419533 LINC00116Q8NCU8 138 aa9.45□□□□□ -0.9
UBR4-206ENST00000419533 GRAPLQ8TC17 118 aaPredicted RBP9.45□□□□□ -0.9
UBR4-206ENST00000419533 DNM3Q9UQ16 869 aa9.45□□□□□ -0.9
UBR4-206ENST00000419533 PTGS1P23219 599 aa9.45□□□□□ -0.9
UBR4-206ENST00000419533 CHRNDQ07001 517 aa9.45□□□□□ -0.9
UBR4-206ENST00000419533 VWA3BQ502W6 1294 aa9.45□□□□□ -0.9
UBR4-206ENST00000419533 CEP112Q8N8E3 955 aa9.45□□□□□ -0.9
UBR4-206ENST00000419533 GOLGA1Q92805 767 aa9.45□□□□□ -0.9
UBR4-206ENST00000419533 LRWD1Q9UFC0 647 aa9.45□□□□□ -0.9
UBR4-206ENST00000419533 ZHX1Q9UKY1 873 aaPredicted RBP9.45□□□□□ -0.9
UBR4-206ENST00000419533 TMEM110-MUSTN1A8MSY1 372 aa9.45□□□□□ -0.9
UBR4-206ENST00000419533 ARID4AP29374 1257 aaPredicted RBP9.45□□□□□ -0.9
UBR4-206ENST00000419533 FAM160A1Q05DH4 1040 aa9.45□□□□□ -0.9
UBR4-206ENST00000419533 ARHGEF6Q15052 776 aa9.45□□□□□ -0.9
UBR4-206ENST00000419533 CTAGE15A4D2H0 777 aa9.45□□□□□ -0.9
UBR4-206ENST00000419533 SEMA3EO15041 775 aa9.45□□□□□ -0.9
UBR4-206ENST00000419533 CTAGE8P0CG41 777 aa9.45□□□□□ -0.9
UBR4-206ENST00000419533 SKILP12757 684 aa9.45□□□□□ -0.9
UBR4-206ENST00000419533 DOK7Q18PE1 504 aa9.45□□□□□ -0.9
UBR4-206ENST00000419533 CTR9Q6PD62 1173 aa9.45□□□□□ -0.9
UBR4-206ENST00000419533 CTAGE6Q86UF2 777 aa9.45□□□□□ -0.9
UBR4-206ENST00000419533 CTAGE4Q8IX94 777 aa9.45□□□□□ -0.9
UBR4-206ENST00000419533 ZNF526Q8TF50 670 aaPredicted RBP9.45□□□□□ -0.9
UBR4-206ENST00000419533 ATP8A2Q9NTI2 1148 aa9.45□□□□□ -0.9
UBR4-206ENST00000419533 ZNF804BA4D1E1 1349 aa9.45□□□□□ -0.9
UBR4-206ENST00000419533 DDX39AO00148 427 aaKnown RBP9.45□□□□□ -0.9
UBR4-206ENST00000419533 CUTAO60888 179 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms