RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 USP26Q9BXU7 913 aa8.05□□□□□ -1.12
NIFKP3-201ENST00000417799 POLR1AO95602 1720 aaPredicted RBP8.05□□□□□ -1.12
NIFKP3-201ENST00000417799 CENPJQ9HC77 1338 aaPredicted RBP8.04□□□□□ -1.12
NIFKP3-201ENST00000417799 PTPRUQ92729 1446 aa8.04□□□□□ -1.12
NIFKP3-201ENST00000417799 SPDYE3A6NKU9 549 aa8.04□□□□□ -1.12
NIFKP3-201ENST00000417799 DDX3YO15523 660 aaKnown RBP8.04□□□□□ -1.12
NIFKP3-201ENST00000417799 TRIM37O94972 964 aa8.04□□□□□ -1.12
NIFKP3-201ENST00000417799 ECEL1O95672 775 aa8.04□□□□□ -1.12
NIFKP3-201ENST00000417799 KCNA6P17658 529 aa8.04□□□□□ -1.12
NIFKP3-201ENST00000417799 FOXD4L6Q3SYB3 417 aaPredicted RBP8.04□□□□□ -1.12
NIFKP3-201ENST00000417799 DIEXFQ68CQ4 756 aaKnown RBP8.04□□□□□ -1.12
NIFKP3-201ENST00000417799 FOXD4L3Q6VB84 417 aaPredicted RBP8.04□□□□□ -1.12
NIFKP3-201ENST00000417799 MPRIPQ6WCQ1 1025 aa8.04□□□□□ -1.12
NIFKP3-201ENST00000417799 BNC2Q6ZN30 1099 aaPredicted RBP8.04□□□□□ -1.12
NIFKP3-201ENST00000417799 FBXO11Q86XK2 927 aa8.04□□□□□ -1.12
NIFKP3-201ENST00000417799 FMR1NBQ8N0W7 255 aaPredicted RBP8.04□□□□□ -1.12
NIFKP3-201ENST00000417799 TESK2Q96S53 571 aa8.04□□□□□ -1.12
NIFKP3-201ENST00000417799 POGKQ9P215 609 aa8.04□□□□□ -1.12
NIFKP3-201ENST00000417799 USP35Q9P2H5 1018 aa8.04□□□□□ -1.12
NIFKP3-201ENST00000417799 TECPR2O15040 1411 aa8.03□□□□□ -1.12
NIFKP3-201ENST00000417799 DLC1Q96QB1 1528 aa8.03□□□□□ -1.12
NIFKP3-201ENST00000417799 ADAM11O75078 769 aa8.03□□□□□ -1.12
NIFKP3-201ENST00000417799 F13A1P00488 732 aa8.03□□□□□ -1.12
NIFKP3-201ENST00000417799 DNAJA1P31689 397 aaKnown RBP8.03□□□□□ -1.12
NIFKP3-201ENST00000417799 ARID5AQ03989 594 aa8.03□□□□□ -1.12
NIFKP3-201ENST00000417799 SF3A1Q15459 793 aaKnown RBP8.03□□□□□ -1.12
NIFKP3-201ENST00000417799 FAM196AQ6ZSG2 479 aa8.03□□□□□ -1.12
NIFKP3-201ENST00000417799 RASGRP4Q8TDF6 673 aa8.03□□□□□ -1.12
NIFKP3-201ENST00000417799 GATAD2BQ8WXI9 593 aa8.03□□□□□ -1.12
NIFKP3-201ENST00000417799 SPATA32Q96LK8 384 aa8.03□□□□□ -1.12
NIFKP3-201ENST00000417799 PRAM1Q96QH2 718 aa8.03□□□□□ -1.12
NIFKP3-201ENST00000417799 KRT82Q9NSB4 513 aa8.03□□□□□ -1.12
NIFKP3-201ENST00000417799 KCNK4Q9NYG8 393 aa8.03□□□□□ -1.12
NIFKP3-201ENST00000417799 UBP1Q9NZI7 540 aa8.03□□□□□ -1.12
NIFKP3-201ENST00000417799 FAM135BQ49AJ0 1406 aa8.03□□□□□ -1.12
NIFKP3-201ENST00000417799 STRCQ7RTU9 1775 aa8.02□□□□□ -1.13
NIFKP3-201ENST00000417799 ROBO2Q9HCK4 1378 aa8.02□□□□□ -1.13
NIFKP3-201ENST00000417799 LOC100289279A0A1B0GTE1 492 aa8.02□□□□□ -1.13
NIFKP3-201ENST00000417799 CTSBP07858 339 aa8.02□□□□□ -1.13
NIFKP3-201ENST00000417799 TMF1P82094 1093 aa8.02□□□□□ -1.13
NIFKP3-201ENST00000417799 PTPN11Q06124 597 aaPredicted RBP8.02□□□□□ -1.13
NIFKP3-201ENST00000417799 TRIM28Q13263 835 aaKnown RBP8.02□□□□□ -1.13
NIFKP3-201ENST00000417799 SAFB2Q14151 953 aaKnown RBP eCLIP8.02□□□□□ -1.13
NIFKP3-201ENST00000417799 PDE3AQ14432 1141 aa8.02□□□□□ -1.13
NIFKP3-201ENST00000417799 WAPLQ7Z5K2 1190 aa8.02□□□□□ -1.13
NIFKP3-201ENST00000417799 GPBAR1Q8TDU6 330 aa8.02□□□□□ -1.13
NIFKP3-201ENST00000417799 GAL3ST3Q96A11 431 aa8.02□□□□□ -1.13
NIFKP3-201ENST00000417799 ACSBG1Q96GR2 724 aa8.02□□□□□ -1.13
NIFKP3-201ENST00000417799 DRC1Q96MC2 740 aa8.02□□□□□ -1.13
NIFKP3-201ENST00000417799 GMLQ99445 158 aa8.02□□□□□ -1.13
NIFKP3-201ENST00000417799 TANGO6Q9C0B7 1094 aa8.02□□□□□ -1.13
NIFKP3-201ENST00000417799 CCDC86Q9H6F5 360 aaKnown RBP8.02□□□□□ -1.13
NIFKP3-201ENST00000417799 CACNA2D2Q9NY47 1150 aa8.02□□□□□ -1.13
NIFKP3-201ENST00000417799 PLEKHH1Q9ULM0 1364 aa8.01□□□□□ -1.13
NIFKP3-201ENST00000417799 SBNO2Q9Y2G9 1366 aa8.01□□□□□ -1.13
NIFKP3-201ENST00000417799 FAM221AA4D161 298 aa8.01□□□□□ -1.13
NIFKP3-201ENST00000417799 DLL1O00548 723 aa8.01□□□□□ -1.13
NIFKP3-201ENST00000417799 IGSF3O75054 1194 aa8.01□□□□□ -1.13
NIFKP3-201ENST00000417799 HNRNPUQ00839 825 aaKnown RBP eCLIP8.01□□□□□ -1.13
NIFKP3-201ENST00000417799 APOBRQ0VD83 1088 aa8.01□□□□□ -1.13
NIFKP3-201ENST00000417799 HP1BP3Q5SSJ5 553 aaPredicted RBP8.01□□□□□ -1.13
NIFKP3-201ENST00000417799 PODNQ7Z5L7 613 aa8.01□□□□□ -1.13
NIFKP3-201ENST00000417799 NKD1Q969G9 470 aa8.01□□□□□ -1.13
NIFKP3-201ENST00000417799 PRKAG2Q9UGJ0 569 aa8.01□□□□□ -1.13
NIFKP3-201ENST00000417799 PTCH1Q13635 1447 aa8.01□□□□□ -1.13
NIFKP3-201ENST00000417799 CPS1P31327 1500 aa8□□□□□ -1.13
NIFKP3-201ENST00000417799 FAM229AH3BQW9 127 aa8□□□□□ -1.13
NIFKP3-201ENST00000417799 TLR3O15455 904 aaKnown RBP8□□□□□ -1.13
NIFKP3-201ENST00000417799 CILPO75339 1184 aa8□□□□□ -1.13
NIFKP3-201ENST00000417799 BPNT1O95861 308 aa8□□□□□ -1.13
NIFKP3-201ENST00000417799 ATF4P18848 351 aaPredicted RBP8□□□□□ -1.13
NIFKP3-201ENST00000417799 LIG1P18858 919 aa8□□□□□ -1.13
NIFKP3-201ENST00000417799 CRKP46108 304 aa8□□□□□ -1.13
NIFKP3-201ENST00000417799 KCNMA1Q12791 1236 aa8□□□□□ -1.13
NIFKP3-201ENST00000417799 MPP2Q14168 576 aa8□□□□□ -1.13
NIFKP3-201ENST00000417799 DUOXA2Q1HG44 320 aa8□□□□□ -1.13
NIFKP3-201ENST00000417799 BEND7Q8N7W2 519 aaPredicted RBP8□□□□□ -1.13
NIFKP3-201ENST00000417799 FBXO27Q8NI29 283 aa8□□□□□ -1.13
NIFKP3-201ENST00000417799 UBASH3BQ8TF42 649 aa8□□□□□ -1.13
NIFKP3-201ENST00000417799 NOP53Q9NZM5 478 aaKnown RBP8□□□□□ -1.13
NIFKP3-201ENST00000417799 PPP1R1BQ9UD71 204 aaPredicted RBP8□□□□□ -1.13
NIFKP3-201ENST00000417799 PCDHA4Q9UN74 947 aa8□□□□□ -1.13
NIFKP3-201ENST00000417799 ARHGEF28Q8N1W1 1705 aaKnown RBP8□□□□□ -1.13
NIFKP3-201ENST00000417799 KIF7Q2M1P5 1343 aa8□□□□□ -1.13
NIFKP3-201ENST00000417799 WASHC2AQ641Q2 1341 aa8□□□□□ -1.13
NIFKP3-201ENST00000417799 EVC2Q86UK5 1308 aa8□□□□□ -1.13
NIFKP3-201ENST00000417799 CNTNAP5Q8WYK1 1306 aa8□□□□□ -1.13
NIFKP3-201ENST00000417799 CCDC7Q96M83 1385 aa7.99□□□□□ -1.13
NIFKP3-201ENST00000417799 DISP3Q9P2K9 1392 aa7.99□□□□□ -1.13
NIFKP3-201ENST00000417799 CHD2O14647 1828 aaKnown RBP7.99□□□□□ -1.13
NIFKP3-201ENST00000417799 ZNF862O60290 1169 aa7.99□□□□□ -1.13
NIFKP3-201ENST00000417799 DLGAP3O95886 979 aa7.99□□□□□ -1.13
NIFKP3-201ENST00000417799 SEZ6Q53EL9 994 aa7.99□□□□□ -1.13
NIFKP3-201ENST00000417799 PRRT3Q5FWE3 981 aa7.99□□□□□ -1.13
NIFKP3-201ENST00000417799 KNDC1Q76NI1 1749 aa7.99□□□□□ -1.13
NIFKP3-201ENST00000417799 XRN1Q8IZH2 1706 aaKnown RBP7.99□□□□□ -1.13
NIFKP3-201ENST00000417799 WDR89Q96FK6 387 aaPredicted RBP7.99□□□□□ -1.13
NIFKP3-201ENST00000417799 SEC16BQ96JE7 1060 aa7.99□□□□□ -1.13
NIFKP3-201ENST00000417799 LRRC3Q9BY71 257 aa7.99□□□□□ -1.13
NIFKP3-201ENST00000417799 ADAMTS8Q9UP79 889 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms