RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 PHF20Q9BVI0 1012 aa16.52■□□□□ 0.23
HDAC9-208ENST00000417496 RNF26Q9BY78 433 aaPredicted RBP16.52■□□□□ 0.23
HDAC9-208ENST00000417496 FAM53CQ9NYF3 392 aa16.52■□□□□ 0.23
HDAC9-208ENST00000417496 CEP131Q9UPN4 1083 aa16.52■□□□□ 0.23
HDAC9-208ENST00000417496 FHOD1Q9Y613 1164 aa16.52■□□□□ 0.23
HDAC9-208ENST00000417496 ABCA3Q99758 1704 aa16.52■□□□□ 0.23
HDAC9-208ENST00000417496 LOC102724428A0A0B4J2F2 783 aa16.51■□□□□ 0.23
HDAC9-208ENST00000417496 PLCD1P51178 756 aa16.51■□□□□ 0.23
HDAC9-208ENST00000417496 SIK1P57059 783 aa16.51■□□□□ 0.23
HDAC9-208ENST00000417496 PAGE5Q96GU1 130 aa16.51■□□□□ 0.23
HDAC9-208ENST00000417496 DISP2A7MBM2 1401 aa16.51■□□□□ 0.23
HDAC9-208ENST00000417496 STX10O60499 249 aa16.51■□□□□ 0.23
HDAC9-208ENST00000417496 SEC31AO94979 1220 aaKnown RBP16.51■□□□□ 0.23
HDAC9-208ENST00000417496 KLRK1P26718 216 aa16.51■□□□□ 0.23
HDAC9-208ENST00000417496 KRT2P35908 639 aa16.51■□□□□ 0.23
HDAC9-208ENST00000417496 BICDL1Q6ZP65 573 aa16.51■□□□□ 0.23
HDAC9-208ENST00000417496 BLZF1Q9H2G9 400 aa16.51■□□□□ 0.23
HDAC9-208ENST00000417496 MRPL44Q9H9J2 332 aaKnown RBP16.51■□□□□ 0.23
HDAC9-208ENST00000417496 JAG2Q9Y219 1238 aa16.51■□□□□ 0.23
HDAC9-208ENST00000417496 USP17L12C9JPN9 530 aa16.5■□□□□ 0.23
HDAC9-208ENST00000417496 USP17L21D6R901 530 aa16.5■□□□□ 0.23
HDAC9-208ENST00000417496 MYO1BO43795 1136 aa16.5■□□□□ 0.23
HDAC9-208ENST00000417496 TADA3O75528 432 aa16.5■□□□□ 0.23
HDAC9-208ENST00000417496 TROAPQ12815 778 aa16.5■□□□□ 0.23
HDAC9-208ENST00000417496 TERF2Q15554 542 aa16.5■□□□□ 0.23
HDAC9-208ENST00000417496 FAM47AQ5JRC9 791 aa16.5■□□□□ 0.23
HDAC9-208ENST00000417496 LZTFL1Q9NQ48 299 aa16.5■□□□□ 0.23
HDAC9-208ENST00000417496 DACH1Q9UI36 760 aa16.5■□□□□ 0.23
HDAC9-208ENST00000417496 TUBB4AP04350 444 aa16.5■□□□□ 0.23
HDAC9-208ENST00000417496 CASQ1P31415 396 aa16.5■□□□□ 0.23
HDAC9-208ENST00000417496 RBL2Q08999 1139 aa16.5■□□□□ 0.23
HDAC9-208ENST00000417496 ERFEQ4G0M1 354 aa16.5■□□□□ 0.23
HDAC9-208ENST00000417496 APTXQ7Z2E3 356 aaKnown RBP16.5■□□□□ 0.23
HDAC9-208ENST00000417496 CATIPQ7Z7H3 387 aa16.5■□□□□ 0.23
HDAC9-208ENST00000417496 LRP5O75197 1615 aa16.49■□□□□ 0.23
HDAC9-208ENST00000417496 ANKRD36CQ5JPF3 1778 aa16.49■□□□□ 0.23
HDAC9-208ENST00000417496 CDC25AP30304 524 aa16.49■□□□□ 0.23
HDAC9-208ENST00000417496 DPYDQ12882 1025 aa16.49■□□□□ 0.23
HDAC9-208ENST00000417496 NPY5RQ15761 445 aa16.49■□□□□ 0.23
HDAC9-208ENST00000417496 CREBRFQ8IUR6 639 aa16.49■□□□□ 0.23
HDAC9-208ENST00000417496 AATFQ9NY61 560 aaKnown RBP eCLIP16.49■□□□□ 0.23
HDAC9-208ENST00000417496 COL1A1P02452 1464 aaPredicted RBP16.49■□□□□ 0.23
HDAC9-208ENST00000417496 A0A1B0GTH6 734 aa16.49■□□□□ 0.23
HDAC9-208ENST00000417496 XBP1P17861 261 aa16.49■□□□□ 0.23
HDAC9-208ENST00000417496 GABPB1Q06547 395 aaPredicted RBP16.49■□□□□ 0.23
HDAC9-208ENST00000417496 PTGDRQ13258 359 aa16.49■□□□□ 0.23
HDAC9-208ENST00000417496 PARP10Q53GL7 1025 aa16.49■□□□□ 0.23
HDAC9-208ENST00000417496 KANK3Q6NY19 840 aa16.49■□□□□ 0.23
HDAC9-208ENST00000417496 CTR9Q6PD62 1173 aa16.49■□□□□ 0.23
HDAC9-208ENST00000417496 FCHSD1Q86WN1 690 aa16.49■□□□□ 0.23
HDAC9-208ENST00000417496 TRIML1Q8N9V2 468 aa16.49■□□□□ 0.23
HDAC9-208ENST00000417496 ZSWIM4Q9H7M6 989 aa16.49■□□□□ 0.23
HDAC9-208ENST00000417496 KIF20AO95235 890 aa16.48■□□□□ 0.23
HDAC9-208ENST00000417496 PNMA6AP0CW24 399 aaPredicted RBP16.48■□□□□ 0.23
HDAC9-208ENST00000417496 CHD4Q14839 1912 aa16.48■□□□□ 0.23
HDAC9-208ENST00000417496 CCDC24Q8N4L8 307 aa16.48■□□□□ 0.23
HDAC9-208ENST00000417496 SRBD1Q8N5C6 995 aaKnown RBP16.48■□□□□ 0.23
HDAC9-208ENST00000417496 ANAPC4Q9UJX5 808 aa16.48■□□□□ 0.23
HDAC9-208ENST00000417496 PRPF3O43395 683 aaKnown RBP16.48■□□□□ 0.23
HDAC9-208ENST00000417496 ADAMTS2O95450 1211 aa16.48■□□□□ 0.23
HDAC9-208ENST00000417496 ERCC5P28715 1186 aaPredicted RBP16.48■□□□□ 0.23
HDAC9-208ENST00000417496 CUL4BQ13620 913 aa16.48■□□□□ 0.23
HDAC9-208ENST00000417496 RAD9BQ6WBX8 426 aa16.48■□□□□ 0.23
HDAC9-208ENST00000417496 IQCA1Q86XH1 822 aa16.48■□□□□ 0.23
HDAC9-208ENST00000417496 IGSF22Q8N9C0 903 aa16.48■□□□□ 0.23
HDAC9-208ENST00000417496 ZBTB9Q96C00 473 aa16.48■□□□□ 0.23
HDAC9-208ENST00000417496 FAM84BQ96KN1 310 aaPredicted RBP16.48■□□□□ 0.23
HDAC9-208ENST00000417496 RTL9Q8NET4 1388 aa16.47■□□□□ 0.23
HDAC9-208ENST00000417496 SYNRGQ9UMZ2 1314 aa16.47■□□□□ 0.23
HDAC9-208ENST00000417496 AKR1B15C9JRZ8 316 aaPredicted RBP16.47■□□□□ 0.23
HDAC9-208ENST00000417496 KCNQ2O43526 872 aa16.47■□□□□ 0.23
HDAC9-208ENST00000417496 CYP2D6P10635 497 aa16.47■□□□□ 0.23
HDAC9-208ENST00000417496 CCT6AP40227 531 aaKnown RBP16.47■□□□□ 0.23
HDAC9-208ENST00000417496 MAP3K9P80192 1104 aa16.47■□□□□ 0.23
HDAC9-208ENST00000417496 BMS1Q14692 1282 aaKnown RBP16.47■□□□□ 0.23
HDAC9-208ENST00000417496 SPATA1Q5VX52 437 aa16.47■□□□□ 0.23
HDAC9-208ENST00000417496 PIK3AP1Q6ZUJ8 805 aa16.47■□□□□ 0.23
HDAC9-208ENST00000417496 ANKRD18AQ8IVF6 992 aa16.47■□□□□ 0.23
HDAC9-208ENST00000417496 CELF1Q92879 486 aaKnown RBP16.47■□□□□ 0.23
HDAC9-208ENST00000417496 KIFC2Q96AC6 838 aa16.47■□□□□ 0.23
HDAC9-208ENST00000417496 MAPK8IP1Q9UQF2 711 aa16.47■□□□□ 0.23
HDAC9-208ENST00000417496 TIAM2Q8IVF5 1701 aa16.47■□□□□ 0.23
HDAC9-208ENST00000417496 ZNF804BA4D1E1 1349 aa16.47■□□□□ 0.23
HDAC9-208ENST00000417496 PPP1R3GB7ZBB8 358 aa16.47■□□□□ 0.23
HDAC9-208ENST00000417496 MCM7P33993 719 aa16.47■□□□□ 0.23
HDAC9-208ENST00000417496 TTC38Q5R3I4 469 aa16.47■□□□□ 0.23
HDAC9-208ENST00000417496 TEX35Q5T0J7 233 aa16.47■□□□□ 0.23
HDAC9-208ENST00000417496 SH3RF1Q7Z6J0 888 aa16.47■□□□□ 0.23
HDAC9-208ENST00000417496 CDC5LQ99459 802 aaKnown RBP16.47■□□□□ 0.23
HDAC9-208ENST00000417496 MTA3Q9BTC8 594 aa16.47■□□□□ 0.23
HDAC9-208ENST00000417496 MINPP1Q9UNW1 487 aa16.47■□□□□ 0.23
HDAC9-208ENST00000417496 DOCK2Q92608 1830 aa16.46■□□□□ 0.23
HDAC9-208ENST00000417496 EFCAB8A8MWE9 144 aa16.46■□□□□ 0.23
HDAC9-208ENST00000417496 PLA2G4AP47712 749 aa16.46■□□□□ 0.23
HDAC9-208ENST00000417496 RCAN1P53805 252 aa16.46■□□□□ 0.23
HDAC9-208ENST00000417496 DDB1Q16531 1140 aa16.46■□□□□ 0.23
HDAC9-208ENST00000417496 IL17AQ16552 155 aa16.46■□□□□ 0.23
HDAC9-208ENST00000417496 GNL3LQ9NVN8 582 aaKnown RBP16.46■□□□□ 0.23
HDAC9-208ENST00000417496 TFCP2L1Q9NZI6 479 aa16.46■□□□□ 0.23
HDAC9-208ENST00000417496 ADD3Q9UEY8 706 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms