RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 HERVK_113P62684 666 aa18.27■□□□□ 0.52
UBXN4-203ENST00000416538 CERKLQ49MI3 558 aaPredicted RBP18.27■□□□□ 0.52
UBXN4-203ENST00000416538 CLEC10AQ8IUN9 316 aa18.27■□□□□ 0.52
UBXN4-203ENST00000416538 SLAIN1Q8ND83 568 aa18.27■□□□□ 0.52
UBXN4-203ENST00000416538 C12orf42Q96LP6 360 aa18.27■□□□□ 0.52
UBXN4-203ENST00000416538 TMOD4Q9NZQ9 345 aa18.27■□□□□ 0.52
UBXN4-203ENST00000416538 POLR3DP05423 398 aaPredicted RBP18.26■□□□□ 0.51
UBXN4-203ENST00000416538 IRX3P78415 501 aaPredicted RBP18.26■□□□□ 0.51
UBXN4-203ENST00000416538 PABPC4Q13310 644 aaKnown RBP eCLIP18.26■□□□□ 0.51
UBXN4-203ENST00000416538 IRF5Q13568 498 aa18.26■□□□□ 0.51
UBXN4-203ENST00000416538 RAB3GAP1Q15042 981 aa18.26■□□□□ 0.51
UBXN4-203ENST00000416538 ABCB5Q2M3G0 1257 aa18.26■□□□□ 0.51
UBXN4-203ENST00000416538 OTUD7AQ8TE49 926 aaPredicted RBP18.26■□□□□ 0.51
UBXN4-203ENST00000416538 DYNLL2Q96FJ2 89 aa18.26■□□□□ 0.51
UBXN4-203ENST00000416538 PUS7LQ9H0K6 701 aaKnown RBP18.26■□□□□ 0.51
UBXN4-203ENST00000416538 UNC93B1Q9H1C4 597 aa18.26■□□□□ 0.51
UBXN4-203ENST00000416538 INHAP05111 366 aa18.25■□□□□ 0.51
UBXN4-203ENST00000416538 SEPT2Q15019 361 aa18.25■□□□□ 0.51
UBXN4-203ENST00000416538 UBE3CQ15386 1083 aa18.25■□□□□ 0.51
UBXN4-203ENST00000416538 USP17L2Q6R6M4 530 aa18.25■□□□□ 0.51
UBXN4-203ENST00000416538 ECHDC1Q9NTX5 307 aa18.25■□□□□ 0.51
UBXN4-203ENST00000416538 RBPJLQ9UBG7 517 aa18.25■□□□□ 0.51
UBXN4-203ENST00000416538 GJD2Q9UKL4 321 aa18.25■□□□□ 0.51
UBXN4-203ENST00000416538 MYH4Q9Y623 1939 aa18.25■□□□□ 0.51
UBXN4-203ENST00000416538 A0A1W2PRG0 241 aa18.24■□□□□ 0.51
UBXN4-203ENST00000416538 VCAM1P19320 739 aa18.24■□□□□ 0.51
UBXN4-203ENST00000416538 FEZ1Q99689 392 aa18.24■□□□□ 0.51
UBXN4-203ENST00000416538 KIAA1683Q9H0B3 1180 aa18.24■□□□□ 0.51
UBXN4-203ENST00000416538 PORCNQ9H237 461 aa18.24■□□□□ 0.51
UBXN4-203ENST00000416538 CNMDO75829 334 aa18.23■□□□□ 0.51
UBXN4-203ENST00000416538 TRIM32Q13049 653 aa18.23■□□□□ 0.51
UBXN4-203ENST00000416538 Q3C1V9 767 aa18.23■□□□□ 0.51
UBXN4-203ENST00000416538 KIAA1755Q5JYT7 1200 aa18.23■□□□□ 0.51
UBXN4-203ENST00000416538 UBE2Q1Q7Z7E8 422 aa18.23■□□□□ 0.51
UBXN4-203ENST00000416538 PXYLP1Q8TE99 480 aa18.23■□□□□ 0.51
UBXN4-203ENST00000416538 CRBNQ96SW2 442 aa18.23■□□□□ 0.51
UBXN4-203ENST00000416538 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.23■□□□□ 0.511e-6■■■□□ 15.4
UBXN4-203ENST00000416538 TAOK2Q9UL54 1235 aa18.23■□□□□ 0.51
UBXN4-203ENST00000416538 ZNF236Q9UL36 1845 aa18.23■□□□□ 0.51
UBXN4-203ENST00000416538 SLC34A2O95436 690 aa18.22■□□□□ 0.51
UBXN4-203ENST00000416538 GJB1P08034 283 aa18.22■□□□□ 0.51
UBXN4-203ENST00000416538 AKR1B1P15121 316 aa18.22■□□□□ 0.51
UBXN4-203ENST00000416538 GJA8P48165 433 aa18.22■□□□□ 0.51
UBXN4-203ENST00000416538 COA7Q96BR5 231 aa18.22■□□□□ 0.51
UBXN4-203ENST00000416538 PAGR1Q9BTK6 254 aa18.22■□□□□ 0.51
UBXN4-203ENST00000416538 RNF208Q9H0X6 261 aa18.22■□□□□ 0.51
UBXN4-203ENST00000416538 BIN2Q9UBW5 565 aaPredicted RBP18.22■□□□□ 0.51
UBXN4-203ENST00000416538 ERVK-9P63128 1117 aa18.21■□□□□ 0.51
UBXN4-203ENST00000416538 ERVK-24P63145 666 aa18.21■□□□□ 0.51
UBXN4-203ENST00000416538 UBXN2AP68543 259 aa18.21■□□□□ 0.51
UBXN4-203ENST00000416538 C12orf60Q5U649 245 aa18.21■□□□□ 0.51
UBXN4-203ENST00000416538 SIAH1Q8IUQ4 282 aa18.21■□□□□ 0.51
UBXN4-203ENST00000416538 KBTBD3Q8NAB2 608 aa18.21■□□□□ 0.51
UBXN4-203ENST00000416538 PI4K2BQ8TCG2 481 aa18.21■□□□□ 0.51
UBXN4-203ENST00000416538 U2AF1L4Q8WU68 220 aaKnown RBP18.21■□□□□ 0.51
UBXN4-203ENST00000416538 TRIB2Q92519 343 aa18.21■□□□□ 0.51
UBXN4-203ENST00000416538 OSBP2Q969R2 916 aa18.21■□□□□ 0.51
UBXN4-203ENST00000416538 YTHDC1Q96MU7 727 aaKnown RBP18.21■□□□□ 0.51
UBXN4-203ENST00000416538 ATP8A2Q9NTI2 1148 aa18.21■□□□□ 0.51
UBXN4-203ENST00000416538 SALL3Q9BXA9 1300 aa18.21■□□□□ 0.51
UBXN4-203ENST00000416538 ZNFX1Q9P2E3 1918 aaKnown RBP18.2■□□□□ 0.5
UBXN4-203ENST00000416538 USP17L12C9JPN9 530 aa18.2■□□□□ 0.5
UBXN4-203ENST00000416538 USP17L21D6R901 530 aa18.2■□□□□ 0.5
UBXN4-203ENST00000416538 EPB41L4AQ9HCS5 686 aaPredicted RBP18.2■□□□□ 0.5
UBXN4-203ENST00000416538 CABP5Q9NP86 173 aa18.2■□□□□ 0.5
UBXN4-203ENST00000416538 PAK6Q9NQU5 681 aaPredicted RBP18.2■□□□□ 0.5
UBXN4-203ENST00000416538 SLC4A4Q9Y6R1 1079 aa18.2■□□□□ 0.5
UBXN4-203ENST00000416538 SPDYE16A6NNV3 312 aaPredicted RBP18.19■□□□□ 0.5
UBXN4-203ENST00000416538 M0R2C6 588 aa18.19■□□□□ 0.5
UBXN4-203ENST00000416538 MPHOSPH10O00566 681 aaKnown RBP18.19■□□□□ 0.5
UBXN4-203ENST00000416538 CTR9Q6PD62 1173 aa18.19■□□□□ 0.5
UBXN4-203ENST00000416538 CATSPERGQ6ZRH7 1159 aa18.19■□□□□ 0.5
UBXN4-203ENST00000416538 GPRC5AQ8NFJ5 357 aa18.19■□□□□ 0.5
UBXN4-203ENST00000416538 STRBPQ96SI9 672 aaKnown RBP18.19■□□□□ 0.5
UBXN4-203ENST00000416538 RPAP3Q9H6T3 665 aaPredicted RBP18.19■□□□□ 0.5
UBXN4-203ENST00000416538 SWAP70Q9UH65 585 aa18.19■□□□□ 0.5
UBXN4-203ENST00000416538 USP17L15C9J2P7 530 aa18.18■□□□□ 0.5
UBXN4-203ENST00000416538 USP17L13C9JLJ4 530 aa18.18■□□□□ 0.5
UBXN4-203ENST00000416538 USP17L11C9JVI0 530 aa18.18■□□□□ 0.5
UBXN4-203ENST00000416538 USP17L18D6R9N7 530 aa18.18■□□□□ 0.5
UBXN4-203ENST00000416538 USP17L22D6RA61 530 aa18.18■□□□□ 0.5
UBXN4-203ENST00000416538 USP17L17D6RBQ6 530 aa18.18■□□□□ 0.5
UBXN4-203ENST00000416538 USP17L19D6RCP7 530 aa18.18■□□□□ 0.5
UBXN4-203ENST00000416538 USP17L20D6RJB6 530 aa18.18■□□□□ 0.5
UBXN4-203ENST00000416538 CDK8P49336 464 aa18.18■□□□□ 0.5
UBXN4-203ENST00000416538 USP14P54578 494 aa18.18■□□□□ 0.5
UBXN4-203ENST00000416538 USP17L24Q0WX57 530 aa18.18■□□□□ 0.5
UBXN4-203ENST00000416538 TMEM179Q6ZVK1 233 aa18.18■□□□□ 0.5
UBXN4-203ENST00000416538 C16orf86Q6ZW13 317 aa18.18■□□□□ 0.5
UBXN4-203ENST00000416538 USP6NLQ92738 828 aa18.18■□□□□ 0.5
UBXN4-203ENST00000416538 BTBD7Q9P203 1132 aa18.18■□□□□ 0.5
UBXN4-203ENST00000416538 TRIOBPQ9H2D6 2365 aa18.18■□□□□ 0.5
UBXN4-203ENST00000416538 ROBO3Q96MS0 1386 aa18.17■□□□□ 0.5
UBXN4-203ENST00000416538 GSG1L2A8MUP6 293 aa18.17■□□□□ 0.5
UBXN4-203ENST00000416538 HMGCRP04035 888 aa18.17■□□□□ 0.5
UBXN4-203ENST00000416538 CYP2B6P20813 491 aa18.17■□□□□ 0.5
UBXN4-203ENST00000416538 LBX2Q6XYB7 198 aa18.17■□□□□ 0.5
UBXN4-203ENST00000416538 GPR142Q7Z601 462 aa18.17■□□□□ 0.5
UBXN4-203ENST00000416538 APPBP2Q92624 585 aa18.17■□□□□ 0.5
UBXN4-203ENST00000416538 DEFB118Q96PH6 123 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms