RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 RNF208Q9H0X6 261 aa16.22■□□□□ 0.19
CPNE1-209ENST00000415920 OSBPL5Q9H0X9 879 aaPredicted RBP16.22■□□□□ 0.19
CPNE1-209ENST00000415920 UNC93B1Q9H1C4 597 aa16.22■□□□□ 0.19
CPNE1-209ENST00000415920 MCM9Q9NXL9 1143 aa16.22■□□□□ 0.19
CPNE1-209ENST00000415920 DOCK3Q8IZD9 2030 aa16.21■□□□□ 0.19
CPNE1-209ENST00000415920 GSG1L2A8MUP6 293 aa16.21■□□□□ 0.19
CPNE1-209ENST00000415920 FOXP2O15409 715 aa16.21■□□□□ 0.19
CPNE1-209ENST00000415920 REC8O95072 547 aa16.21■□□□□ 0.19
CPNE1-209ENST00000415920 ELNP15502 786 aa16.21■□□□□ 0.19
CPNE1-209ENST00000415920 GJA8P48165 433 aa16.21■□□□□ 0.19
CPNE1-209ENST00000415920 FCGRTP55899 365 aa16.21■□□□□ 0.19
CPNE1-209ENST00000415920 MAP3K10Q02779 954 aa16.21■□□□□ 0.19
CPNE1-209ENST00000415920 AMOTL1Q8IY63 956 aa16.21■□□□□ 0.19
CPNE1-209ENST00000415920 DPF3Q92784 378 aa16.21■□□□□ 0.19
CPNE1-209ENST00000415920 DCP1AQ9NPI6 582 aaPredicted RBP16.21■□□□□ 0.19
CPNE1-209ENST00000415920 ATP8A2Q9NTI2 1148 aa16.21■□□□□ 0.19
CPNE1-209ENST00000415920 ARPP21Q9UBL0 812 aaPredicted RBP16.21■□□□□ 0.19
CPNE1-209ENST00000415920 TRIM75PA6NK02 468 aa16.2■□□□□ 0.18
CPNE1-209ENST00000415920 PATL2C9JE40 543 aaKnown RBP16.2■□□□□ 0.18
CPNE1-209ENST00000415920 GJB1P08034 283 aa16.2■□□□□ 0.18
CPNE1-209ENST00000415920 HOXD10P28358 340 aa16.2■□□□□ 0.18
CPNE1-209ENST00000415920 PTH1RQ03431 593 aa16.2■□□□□ 0.18
CPNE1-209ENST00000415920 TREML2Q5T2D2 321 aa16.2■□□□□ 0.18
CPNE1-209ENST00000415920 IFNL3Q8IZI9 196 aa16.2■□□□□ 0.18
CPNE1-209ENST00000415920 DSCC1Q9BVC3 393 aa16.2■□□□□ 0.18
CPNE1-209ENST00000415920 PICK1Q9NRD5 415 aa16.2■□□□□ 0.18
CPNE1-209ENST00000415920 RBM27Q9P2N5 1060 aaKnown RBP16.2■□□□□ 0.18
CPNE1-209ENST00000415920 BIN2Q9UBW5 565 aaPredicted RBP16.2■□□□□ 0.18
CPNE1-209ENST00000415920 ZMYM6O95789 1325 aa16.19■□□□□ 0.18
CPNE1-209ENST00000415920 MYH4Q9Y623 1939 aa16.19■□□□□ 0.18
CPNE1-209ENST00000415920 POLR3DP05423 398 aaPredicted RBP16.19■□□□□ 0.18
CPNE1-209ENST00000415920 FLT3LGP49771 235 aa16.19■□□□□ 0.18
CPNE1-209ENST00000415920 RRP1BQ14684 758 aaKnown RBP16.19■□□□□ 0.18
CPNE1-209ENST00000415920 U2AF1L4Q8WU68 220 aaKnown RBP16.19■□□□□ 0.18
CPNE1-209ENST00000415920 LSG1Q9H089 658 aaKnown RBP16.19■□□□□ 0.18
CPNE1-209ENST00000415920 PALD1Q9ULE6 856 aa16.19■□□□□ 0.18
CPNE1-209ENST00000415920 SZT2Q5T011 3432 aa16.19■□□□□ 0.18
CPNE1-209ENST00000415920 LOC285556D6RIA3 1793 aa16.18■□□□□ 0.18
CPNE1-209ENST00000415920 ALPK3Q96L96 1907 aa16.18■□□□□ 0.18
CPNE1-209ENST00000415920 GREB1LQ9C091 1923 aaPredicted RBP16.18■□□□□ 0.18
CPNE1-209ENST00000415920 ADCY3O60266 1144 aa16.18■□□□□ 0.18
CPNE1-209ENST00000415920 HLA-DOAP06340 250 aa16.18■□□□□ 0.18
CPNE1-209ENST00000415920 CYP2D6P10635 497 aa16.18■□□□□ 0.18
CPNE1-209ENST00000415920 FASTKD5Q7L8L6 764 aaKnown RBP16.18■□□□□ 0.18
CPNE1-209ENST00000415920 SLAIN1Q8ND83 568 aa16.18■□□□□ 0.18
CPNE1-209ENST00000415920 RBM8AQ9Y5S9 174 aaKnown RBP16.18■□□□□ 0.18
CPNE1-209ENST00000415920 ROBO3Q96MS0 1386 aa16.17■□□□□ 0.18
CPNE1-209ENST00000415920 CYP2D7A0A087X1C5 515 aa16.17■□□□□ 0.18
CPNE1-209ENST00000415920 MINDY4BA8MYZ0 360 aa16.17■□□□□ 0.18
CPNE1-209ENST00000415920 USP17L12C9JPN9 530 aa16.17■□□□□ 0.18
CPNE1-209ENST00000415920 USP17L21D6R901 530 aa16.17■□□□□ 0.18
CPNE1-209ENST00000415920 CTNND1O60716 968 aaKnown RBP16.17■□□□□ 0.18
CPNE1-209ENST00000415920 NPM3O75607 178 aaKnown RBP16.17■□□□□ 0.18
CPNE1-209ENST00000415920 FARP2O94887 1054 aaPredicted RBP16.17■□□□□ 0.18
CPNE1-209ENST00000415920 INHAP05111 366 aa16.17■□□□□ 0.18
CPNE1-209ENST00000415920 HAND2P61296 217 aa16.17■□□□□ 0.18
CPNE1-209ENST00000415920 UBXN2AP68543 259 aa16.17■□□□□ 0.18
CPNE1-209ENST00000415920 EVX2Q03828 476 aa16.17■□□□□ 0.18
CPNE1-209ENST00000415920 GIMAP6Q6P9H5 292 aa16.17■□□□□ 0.18
CPNE1-209ENST00000415920 STK11IPQ8N1F8 1099 aa16.17■□□□□ 0.18
CPNE1-209ENST00000415920 ANKRD13CQ8N6S4 541 aa16.17■□□□□ 0.18
CPNE1-209ENST00000415920 TRIM34Q9BYJ4 488 aa16.17■□□□□ 0.18
CPNE1-209ENST00000415920 U3KPZ7 1027 aaPredicted RBP16.17■□□□□ 0.18
CPNE1-209ENST00000415920 TNPO2O14787 897 aaKnown RBP16.16■□□□□ 0.18
CPNE1-209ENST00000415920 EIF5BO60841 1220 aaKnown RBP16.16■□□□□ 0.18
CPNE1-209ENST00000415920 CTR9Q6PD62 1173 aa16.16■□□□□ 0.18
CPNE1-209ENST00000415920 NKX2-3Q8TAU0 364 aa16.16■□□□□ 0.18
CPNE1-209ENST00000415920 SMCR8Q8TEV9 937 aaPredicted RBP16.16■□□□□ 0.18
CPNE1-209ENST00000415920 DHX36Q9H2U1 1008 aaKnown RBP16.16■□□□□ 0.18
CPNE1-209ENST00000415920 PRO3102Q9H379 93 aa16.16■□□□□ 0.18
CPNE1-209ENST00000415920 AGTPBP1Q9UPW5 1226 aa16.16■□□□□ 0.18
CPNE1-209ENST00000415920 SLC45A1Q9Y2W3 748 aa16.16■□□□□ 0.18
CPNE1-209ENST00000415920 RANBP2P49792 3224 aaKnown RBP16.16■□□□□ 0.18
CPNE1-209ENST00000415920 SGPL1O95470 568 aa16.15■□□□□ 0.18
CPNE1-209ENST00000415920 SEC24BO95487 1268 aa16.15■□□□□ 0.18
CPNE1-209ENST00000415920 FGAP02671 866 aa16.15■□□□□ 0.18
CPNE1-209ENST00000415920 PPARAQ07869 468 aa16.15■□□□□ 0.18
CPNE1-209ENST00000415920 ALX1Q15699 326 aa16.15■□□□□ 0.18
CPNE1-209ENST00000415920 IMMTQ16891 758 aaKnown RBP16.15■□□□□ 0.18
CPNE1-209ENST00000415920 TTC6Q86TZ1 520 aa16.15■□□□□ 0.18
CPNE1-209ENST00000415920 CRACR2BQ8N4Y2 399 aaPredicted RBP16.15■□□□□ 0.18
CPNE1-209ENST00000415920 MAP4K1Q92918 833 aa16.15■□□□□ 0.18
CPNE1-209ENST00000415920 DEFB118Q96PH6 123 aa16.15■□□□□ 0.18
CPNE1-209ENST00000415920 CTNNA3Q9UI47 895 aa16.15■□□□□ 0.18
CPNE1-209ENST00000415920 TAOK2Q9UL54 1235 aa16.15■□□□□ 0.18
CPNE1-209ENST00000415920 SMIM22K7EJ46 135 aa16.14■□□□□ 0.17
CPNE1-209ENST00000415920 PEX10O60683 326 aa16.14■□□□□ 0.17
CPNE1-209ENST00000415920 CTDSPL2Q05D32 466 aa16.14■□□□□ 0.17
CPNE1-209ENST00000415920 UPF2Q9HAU5 1272 aaKnown RBP16.14■□□□□ 0.17
CPNE1-209ENST00000415920 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.14■□□□□ 0.17
CPNE1-209ENST00000415920 PLXNB2O15031 1838 aa16.14■□□□□ 0.17
CPNE1-209ENST00000415920 ZNF213O14771 459 aa16.13■□□□□ 0.17
CPNE1-209ENST00000415920 TBC1D12O60347 775 aa16.13■□□□□ 0.17
CPNE1-209ENST00000415920 MCCP23508 829 aa16.13■□□□□ 0.17
CPNE1-209ENST00000415920 PLCD1P51178 756 aa16.13■□□□□ 0.17
CPNE1-209ENST00000415920 HMGCS2P54868 508 aa16.13■□□□□ 0.17
CPNE1-209ENST00000415920 JAG1P78504 1218 aa16.13■□□□□ 0.17
CPNE1-209ENST00000415920 SPP2Q13103 211 aa16.13■□□□□ 0.17
CPNE1-209ENST00000415920 IRF5Q13568 498 aa16.13■□□□□ 0.17
CPNE1-209ENST00000415920 SHROOM1Q2M3G4 852 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms