RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 CTNND1O60716 968 aaKnown RBP11.63□□□□□ -0.55
LINC01090-201ENST00000415357 PTPRAP18433 802 aa11.63□□□□□ -0.55
LINC01090-201ENST00000415357 USP5P45974 858 aa11.63□□□□□ -0.55
LINC01090-201ENST00000415357 CAP1Q01518 475 aa11.63□□□□□ -0.55
LINC01090-201ENST00000415357 MOGSQ13724 837 aa11.63□□□□□ -0.55
LINC01090-201ENST00000415357 SHROOM1Q2M3G4 852 aaPredicted RBP11.63□□□□□ -0.55
LINC01090-201ENST00000415357 OTUD7AQ8TE49 926 aaPredicted RBP11.63□□□□□ -0.55
LINC01090-201ENST00000415357 ECHDC1Q9NTX5 307 aa11.63□□□□□ -0.55
LINC01090-201ENST00000415357 DDX60LQ5H9U9 1706 aaKnown RBP11.63□□□□□ -0.55
LINC01090-201ENST00000415357 PHIPQ8WWQ0 1821 aa11.63□□□□□ -0.55
LINC01090-201ENST00000415357 ATAD5Q96QE3 1844 aa11.63□□□□□ -0.55
LINC01090-201ENST00000415357 NAV1Q8NEY1 1877 aa11.62□□□□□ -0.55
LINC01090-201ENST00000415357 TRIM75PA6NK02 468 aa11.62□□□□□ -0.55
LINC01090-201ENST00000415357 JAG1P78504 1218 aa11.62□□□□□ -0.55
LINC01090-201ENST00000415357 PROX2Q3B8N5 592 aa11.62□□□□□ -0.55
LINC01090-201ENST00000415357 LCORLQ8N3X6 602 aa11.62□□□□□ -0.55
LINC01090-201ENST00000415357 CRACR2BQ8N4Y2 399 aaPredicted RBP11.62□□□□□ -0.55
LINC01090-201ENST00000415357 CD99L2Q8TCZ2 262 aa11.62□□□□□ -0.55
LINC01090-201ENST00000415357 ZBED2Q9BTP6 218 aa11.62□□□□□ -0.55
LINC01090-201ENST00000415357 DHX36Q9H2U1 1008 aaKnown RBP11.62□□□□□ -0.55
LINC01090-201ENST00000415357 ZFYVE28Q9HCC9 887 aa11.62□□□□□ -0.55
LINC01090-201ENST00000415357 PI4KBQ9UBF8 816 aa11.62□□□□□ -0.55
LINC01090-201ENST00000415357 HERC5Q9UII4 1024 aaKnown RBP11.62□□□□□ -0.55
LINC01090-201ENST00000415357 MYH1P12882 1939 aa11.62□□□□□ -0.55
LINC01090-201ENST00000415357 CXCL11O14625 94 aa11.61□□□□□ -0.55
LINC01090-201ENST00000415357 MBD4O95243 580 aa11.61□□□□□ -0.55
LINC01090-201ENST00000415357 GDF11O95390 407 aa11.61□□□□□ -0.55
LINC01090-201ENST00000415357 HLA-DOAP06340 250 aa11.61□□□□□ -0.55
LINC01090-201ENST00000415357 ADD2P35612 726 aa11.61□□□□□ -0.55
LINC01090-201ENST00000415357 CAP2P40123 477 aa11.61□□□□□ -0.55
LINC01090-201ENST00000415357 PTGDRQ13258 359 aa11.61□□□□□ -0.55
LINC01090-201ENST00000415357 GPAT2Q6NUI2 795 aa11.61□□□□□ -0.55
LINC01090-201ENST00000415357 GADL1Q6ZQY3 521 aa11.61□□□□□ -0.55
LINC01090-201ENST00000415357 EXOC6Q8TAG9 804 aa11.61□□□□□ -0.55
LINC01090-201ENST00000415357 SDR42E1Q8WUS8 393 aa11.61□□□□□ -0.55
LINC01090-201ENST00000415357 ARMT1Q9H993 441 aa11.61□□□□□ -0.55
LINC01090-201ENST00000415357 NPDC1Q9NQX5 325 aaPredicted RBP11.61□□□□□ -0.55
LINC01090-201ENST00000415357 AFG3L2Q9Y4W6 797 aa11.61□□□□□ -0.55
LINC01090-201ENST00000415357 ZSWIM8A7E2V4 1837 aa11.6□□□□□ -0.55
LINC01090-201ENST00000415357 PTPRFP10586 1907 aa11.6□□□□□ -0.55
LINC01090-201ENST00000415357 A0A0G2JLL6 359 aaPredicted RBP11.6□□□□□ -0.55
LINC01090-201ENST00000415357 PDHXO00330 501 aa11.6□□□□□ -0.55
LINC01090-201ENST00000415357 SP3Q02447 781 aa11.6□□□□□ -0.55
LINC01090-201ENST00000415357 TMED8Q6PL24 325 aaPredicted RBP11.6□□□□□ -0.55
LINC01090-201ENST00000415357 PRRT2Q7Z6L0 340 aaPredicted RBP11.6□□□□□ -0.55
LINC01090-201ENST00000415357 ANKRD23Q86SG2 305 aa11.6□□□□□ -0.55
LINC01090-201ENST00000415357 CERS3Q8IU89 383 aa11.6□□□□□ -0.55
LINC01090-201ENST00000415357 GPATCH3Q96I76 525 aa11.6□□□□□ -0.55
LINC01090-201ENST00000415357 TRIM34Q9BYJ4 488 aa11.6□□□□□ -0.55
LINC01090-201ENST00000415357 CRNKL1Q9BZJ0 848 aaKnown RBP11.6□□□□□ -0.55
LINC01090-201ENST00000415357 PCDH10Q9P2E7 1040 aa11.6□□□□□ -0.55
LINC01090-201ENST00000415357 TRIM17Q9Y577 477 aa11.6□□□□□ -0.55
LINC01090-201ENST00000415357 SUPT16HQ9Y5B9 1047 aaKnown RBP11.6□□□□□ -0.55
LINC01090-201ENST00000415357 MYH7P12883 1935 aa11.6□□□□□ -0.55
LINC01090-201ENST00000415357 PRKAB2O43741 272 aa11.59□□□□□ -0.55
LINC01090-201ENST00000415357 TLR2O60603 784 aa11.59□□□□□ -0.55
LINC01090-201ENST00000415357 CYP2D6P10635 497 aa11.59□□□□□ -0.55
LINC01090-201ENST00000415357 PLCD1P51178 756 aa11.59□□□□□ -0.55
LINC01090-201ENST00000415357 SPP2Q13103 211 aa11.59□□□□□ -0.55
LINC01090-201ENST00000415357 ANKRD45Q5TZF3 282 aa11.59□□□□□ -0.55
LINC01090-201ENST00000415357 ADGRD1Q6QNK2 874 aa11.59□□□□□ -0.55
LINC01090-201ENST00000415357 OTOP1Q7RTM1 612 aa11.59□□□□□ -0.55
LINC01090-201ENST00000415357 METTL16Q86W50 562 aaKnown RBP11.59□□□□□ -0.55
LINC01090-201ENST00000415357 ERO1AQ96HE7 468 aa11.59□□□□□ -0.55
LINC01090-201ENST00000415357 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.59□□□□□ -0.55
LINC01090-201ENST00000415357 ZCCHC17Q9NP64 241 aaKnown RBP11.59□□□□□ -0.55
LINC01090-201ENST00000415357 CPA4Q9UI42 421 aa11.59□□□□□ -0.55
LINC01090-201ENST00000415357 HPS5Q9UPZ3 1129 aa11.59□□□□□ -0.55
LINC01090-201ENST00000415357 ADGRA2Q96PE1 1338 aa11.59□□□□□ -0.55
LINC01090-201ENST00000415357 USP17L5A8MUK1 530 aa11.58□□□□□ -0.56
LINC01090-201ENST00000415357 POLR3DP05423 398 aaPredicted RBP11.58□□□□□ -0.56
LINC01090-201ENST00000415357 CYP2C8P10632 490 aa11.58□□□□□ -0.56
LINC01090-201ENST00000415357 HDAC1Q13547 482 aaPredicted RBP11.58□□□□□ -0.56
LINC01090-201ENST00000415357 TREML2Q5T2D2 321 aa11.58□□□□□ -0.56
LINC01090-201ENST00000415357 FOXP4Q8IVH2 680 aaPredicted RBP11.58□□□□□ -0.56
LINC01090-201ENST00000415357 ZNF280CQ8ND82 737 aa11.58□□□□□ -0.56
LINC01090-201ENST00000415357 PI4K2BQ8TCG2 481 aa11.58□□□□□ -0.56
LINC01090-201ENST00000415357 ARHGAP39Q9C0H5 1083 aa11.58□□□□□ -0.56
LINC01090-201ENST00000415357 PUS7LQ9H0K6 701 aaKnown RBP11.58□□□□□ -0.56
LINC01090-201ENST00000415357 DCP1AQ9NPI6 582 aaPredicted RBP11.58□□□□□ -0.56
LINC01090-201ENST00000415357 SERPINB13Q9UIV8 391 aa11.58□□□□□ -0.56
LINC01090-201ENST00000415357 ZBTB21Q9ULJ3 1066 aa11.58□□□□□ -0.56
LINC01090-201ENST00000415357 SALL3Q9BXA9 1300 aa11.58□□□□□ -0.56
LINC01090-201ENST00000415357 CENPFP49454 3210 aa11.58□□□□□ -0.56
LINC01090-201ENST00000415357 LOC285556D6RIA3 1793 aa11.57□□□□□ -0.56
LINC01090-201ENST00000415357 SMIM22K7EJ46 135 aa11.57□□□□□ -0.56
LINC01090-201ENST00000415357 GPR37O15354 613 aa11.57□□□□□ -0.56
LINC01090-201ENST00000415357 MX1P20591 662 aa11.57□□□□□ -0.56
LINC01090-201ENST00000415357 HMGCS2P54868 508 aa11.57□□□□□ -0.56
LINC01090-201ENST00000415357 PRSS12P56730 875 aa11.57□□□□□ -0.56
LINC01090-201ENST00000415357 IRX6P78412 446 aaPredicted RBP11.57□□□□□ -0.56
LINC01090-201ENST00000415357 UBE3CQ15386 1083 aa11.57□□□□□ -0.56
LINC01090-201ENST00000415357 PKN2Q16513 984 aaKnown RBP11.57□□□□□ -0.56
LINC01090-201ENST00000415357 FBXO46Q6PJ61 603 aaPredicted RBP11.57□□□□□ -0.56
LINC01090-201ENST00000415357 PADI6Q6TGC4 694 aa11.57□□□□□ -0.56
LINC01090-201ENST00000415357 C17orf99Q6UX52 265 aa11.57□□□□□ -0.56
LINC01090-201ENST00000415357 FASTKD5Q7L8L6 764 aaKnown RBP11.57□□□□□ -0.56
LINC01090-201ENST00000415357 TTC6Q86TZ1 520 aa11.57□□□□□ -0.56
LINC01090-201ENST00000415357 KBTBD3Q8NAB2 608 aa11.57□□□□□ -0.56
LINC01090-201ENST00000415357 PARK7Q99497 189 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms