RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 KLHDC4Q8TBB5 520 aa20.47■□□□□ 0.87
SHANK3-202ENST00000414786 SNX29Q8TEQ0 813 aa20.47■□□□□ 0.87
SHANK3-202ENST00000414786 XAB2Q9HCS7 855 aaKnown RBP20.47■□□□□ 0.87
SHANK3-202ENST00000414786 MGEA5O60502 916 aa20.47■□□□□ 0.87
SHANK3-202ENST00000414786 ATF7P17544 494 aaPredicted RBP20.47■□□□□ 0.87
SHANK3-202ENST00000414786 BLVRAP53004 296 aa20.47■□□□□ 0.87
SHANK3-202ENST00000414786 PALM2Q8IXS6 379 aa20.47■□□□□ 0.87
SHANK3-202ENST00000414786 RBSNQ9H1K0 784 aa20.47■□□□□ 0.87
SHANK3-202ENST00000414786 MAP7Q14244 749 aa20.47■□□□□ 0.87
SHANK3-202ENST00000414786 DLGAP5Q15398 846 aa20.47■□□□□ 0.87
SHANK3-202ENST00000414786 ANLNQ9NQW6 1124 aa20.47■□□□□ 0.87
SHANK3-202ENST00000414786 NCOA5Q9HCD5 579 aaKnown RBP20.46■□□□□ 0.87
SHANK3-202ENST00000414786 DPY19L2Q6NUT2 758 aa20.46■□□□□ 0.87
SHANK3-202ENST00000414786 VSIG1Q86XK7 387 aa20.46■□□□□ 0.87
SHANK3-202ENST00000414786 KIF21BO75037 1637 aa20.46■□□□□ 0.87
SHANK3-202ENST00000414786 POLR2DO15514 142 aaKnown RBP20.46■□□□□ 0.87
SHANK3-202ENST00000414786 DLATP10515 647 aaKnown RBP20.46■□□□□ 0.87
SHANK3-202ENST00000414786 SESN3P58005 492 aa20.46■□□□□ 0.87
SHANK3-202ENST00000414786 KRT24Q2M2I5 525 aa20.46■□□□□ 0.87
SHANK3-202ENST00000414786 OTUD7BQ6GQQ9 843 aa20.46■□□□□ 0.87
SHANK3-202ENST00000414786 SND1Q7KZF4 910 aaKnown RBP eCLIP20.46■□□□□ 0.87
SHANK3-202ENST00000414786 SEPT8Q92599 483 aa20.46■□□□□ 0.87
SHANK3-202ENST00000414786 HAUS2Q9NVX0 235 aa20.46■□□□□ 0.87
SHANK3-202ENST00000414786 ITGA6P23229 1130 aa20.46■□□□□ 0.87
SHANK3-202ENST00000414786 PGBD1Q96JS3 809 aa20.46■□□□□ 0.87
SHANK3-202ENST00000414786 TRAPPC10P48553 1259 aa20.46■□□□□ 0.87
SHANK3-202ENST00000414786 GDAP1Q8TB36 358 aa20.46■□□□□ 0.87
SHANK3-202ENST00000414786 IGHDP01880 384 aa20.45■□□□□ 0.86
SHANK3-202ENST00000414786 ZNF853P0CG23 659 aa20.45■□□□□ 0.86
SHANK3-202ENST00000414786 TSGA10Q9BZW7 698 aa20.45■□□□□ 0.86
SHANK3-202ENST00000414786 ANGPTL3Q9Y5C1 460 aa20.45■□□□□ 0.86
SHANK3-202ENST00000414786 STK24Q9Y6E0 443 aa20.45■□□□□ 0.86
SHANK3-202ENST00000414786 NBPF11Q86T75 865 aa20.45■□□□□ 0.86
SHANK3-202ENST00000414786 KRT12Q99456 494 aa20.45■□□□□ 0.86
SHANK3-202ENST00000414786 SLITRK6Q9H5Y7 841 aa20.45■□□□□ 0.86
SHANK3-202ENST00000414786 GNAT2P19087 354 aa20.45■□□□□ 0.86
SHANK3-202ENST00000414786 CACNA2D3Q8IZS8 1091 aa20.45■□□□□ 0.86
SHANK3-202ENST00000414786 RBM46Q8TBY0 533 aaKnown RBP20.45■□□□□ 0.86
SHANK3-202ENST00000414786 DCPSQ96C86 337 aaKnown RBP20.45■□□□□ 0.86
SHANK3-202ENST00000414786 ECE1P42892 770 aa20.45■□□□□ 0.86
SHANK3-202ENST00000414786 TSR3Q9UJK0 312 aaKnown RBP20.45■□□□□ 0.86
SHANK3-202ENST00000414786 UBXN2AP68543 259 aa20.45■□□□□ 0.86
SHANK3-202ENST00000414786 TTBK2Q6IQ55 1244 aa20.45■□□□□ 0.86
SHANK3-202ENST00000414786 NOLC1Q14978 699 aaKnown RBP eCLIP20.44■□□□□ 0.863e-8■□□□□ 8.2
SHANK3-202ENST00000414786 PHKBQ93100 1093 aa20.44■□□□□ 0.86
SHANK3-202ENST00000414786 PARP2Q9UGN5 583 aa20.44■□□□□ 0.86
SHANK3-202ENST00000414786 EPRSP07814 1512 aaKnown RBP20.44■□□□□ 0.86
SHANK3-202ENST00000414786 TYRO3Q06418 890 aa20.44■□□□□ 0.86
SHANK3-202ENST00000414786 C8orf74Q6P047 294 aa20.44■□□□□ 0.86
SHANK3-202ENST00000414786 KIAA1841Q6NSI8 718 aa20.44■□□□□ 0.86
SHANK3-202ENST00000414786 CSGALNACT2Q8N6G5 542 aa20.44■□□□□ 0.86
SHANK3-202ENST00000414786 IQUBQ8NA54 791 aa20.44■□□□□ 0.86
SHANK3-202ENST00000414786 TRIM68Q6AZZ1 485 aa20.44■□□□□ 0.86
SHANK3-202ENST00000414786 NOP14P78316 857 aaKnown RBP20.44■□□□□ 0.86
SHANK3-202ENST00000414786 GTF2IP78347 998 aa20.44■□□□□ 0.86
SHANK3-202ENST00000414786 CALCRLQ16602 461 aa20.44■□□□□ 0.86
SHANK3-202ENST00000414786 RAPH1Q70E73 1250 aa20.44■□□□□ 0.86
SHANK3-202ENST00000414786 DPP9Q86TI2 863 aa20.44■□□□□ 0.86
SHANK3-202ENST00000414786 NLRX1Q86UT6 975 aa20.44■□□□□ 0.86
SHANK3-202ENST00000414786 CCDC68Q9H2F9 335 aa20.44■□□□□ 0.86
SHANK3-202ENST00000414786 HELLSQ9NRZ9 838 aa20.44■□□□□ 0.86
SHANK3-202ENST00000414786 DNM3Q9UQ16 869 aa20.44■□□□□ 0.86
SHANK3-202ENST00000414786 RPS6KC1Q96S38 1066 aa20.43■□□□□ 0.86
SHANK3-202ENST00000414786 AK2P54819 239 aa20.43■□□□□ 0.86
SHANK3-202ENST00000414786 NLRC4Q9NPP4 1024 aa20.43■□□□□ 0.86
SHANK3-202ENST00000414786 NVLO15381 856 aaKnown RBP20.43■□□□□ 0.86
SHANK3-202ENST00000414786 ATP5DP30049 168 aa20.43■□□□□ 0.86
SHANK3-202ENST00000414786 ATP6V1E2Q96A05 226 aa20.43■□□□□ 0.86
SHANK3-202ENST00000414786 RSRC1Q96IZ7 334 aaKnown RBP20.43■□□□□ 0.86
SHANK3-202ENST00000414786 ZBED2Q9BTP6 218 aa20.43■□□□□ 0.86
SHANK3-202ENST00000414786 ANAPC5Q9UJX4 755 aa20.43■□□□□ 0.86
SHANK3-202ENST00000414786 AKR1B15C9JRZ8 316 aaPredicted RBP20.43■□□□□ 0.86
SHANK3-202ENST00000414786 U2AF2P26368 475 aaKnown RBP eCLIP20.43■□□□□ 0.86
SHANK3-202ENST00000414786 ANO4Q32M45 955 aa20.43■□□□□ 0.86
SHANK3-202ENST00000414786 CREB3L3Q68CJ9 461 aa20.43■□□□□ 0.86
SHANK3-202ENST00000414786 GBP1P32455 592 aa20.43■□□□□ 0.86
SHANK3-202ENST00000414786 PHLDB2Q86SQ0 1253 aa20.43■□□□□ 0.86
SHANK3-202ENST00000414786 DISC1Q9NRI5 854 aa20.43■□□□□ 0.86
SHANK3-202ENST00000414786 AKT3Q9Y243 479 aa20.43■□□□□ 0.86
SHANK3-202ENST00000414786 EEPD1Q7L9B9 569 aa20.43■□□□□ 0.86
SHANK3-202ENST00000414786 MAD1L1Q9Y6D9 718 aa20.43■□□□□ 0.86
SHANK3-202ENST00000414786 LLGL1Q15334 1064 aa20.42■□□□□ 0.86
SHANK3-202ENST00000414786 ANGPTL8Q6UXH0 198 aa20.42■□□□□ 0.86
SHANK3-202ENST00000414786 RBM28Q9NW13 759 aaKnown RBP20.42■□□□□ 0.86
SHANK3-202ENST00000414786 TAB2Q9NYJ8 693 aa20.42■□□□□ 0.86
SHANK3-202ENST00000414786 DENND2AQ9ULE3 1009 aa20.42■□□□□ 0.86
SHANK3-202ENST00000414786 F13A1P00488 732 aa20.42■□□□□ 0.86
SHANK3-202ENST00000414786 PNMA8AQ86V59 439 aaPredicted RBP20.42■□□□□ 0.86
SHANK3-202ENST00000414786 IGSF22Q8N9C0 903 aa20.42■□□□□ 0.86
SHANK3-202ENST00000414786 STAM2O75886 525 aa20.42■□□□□ 0.86
SHANK3-202ENST00000414786 KRBA2Q6ZNG9 492 aa20.42■□□□□ 0.86
SHANK3-202ENST00000414786 MAFGO15525 162 aa20.42■□□□□ 0.86
SHANK3-202ENST00000414786 KRT3P12035 628 aa20.42■□□□□ 0.86
SHANK3-202ENST00000414786 BAG5Q9UL15 447 aa20.42■□□□□ 0.86
SHANK3-202ENST00000414786 ESYT1Q9BSJ8 1104 aa20.41■□□□□ 0.86
SHANK3-202ENST00000414786 NUB1Q9Y5A7 615 aa20.41■□□□□ 0.86
SHANK3-202ENST00000414786 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.41■□□□□ 0.86
SHANK3-202ENST00000414786 ADGRF5Q8IZF2 1346 aa20.41■□□□□ 0.86
SHANK3-202ENST00000414786 KDRP35968 1356 aa20.41■□□□□ 0.86
SHANK3-202ENST00000414786 HNRNPCL2B2RXH8 293 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms