RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 ECE1P42892 770 aa11.3□□□□□ -0.6
SMPD4-203ENST00000412570 TSGA10IPQ3SY00 556 aa11.3□□□□□ -0.6
SMPD4-203ENST00000412570 MOB2Q70IA6 237 aa11.3□□□□□ -0.6
SMPD4-203ENST00000412570 TRMT1LQ7Z2T5 733 aaKnown RBP11.3□□□□□ -0.6
SMPD4-203ENST00000412570 GLIS2Q9BZE0 524 aaPredicted RBP11.3□□□□□ -0.6
SMPD4-203ENST00000412570 SCN9AQ15858 1988 aa11.3□□□□□ -0.6
SMPD4-203ENST00000412570 COL4A5P29400 1685 aa11.3□□□□□ -0.6
SMPD4-203ENST00000412570 MYH2Q9UKX2 1941 aa11.29□□□□□ -0.6
SMPD4-203ENST00000412570 SF3A1Q15459 793 aaKnown RBP11.29□□□□□ -0.6
SMPD4-203ENST00000412570 CC2D2BQ6DHV5 1058 aa11.29□□□□□ -0.6
SMPD4-203ENST00000412570 RNF214Q8ND24 703 aa11.29□□□□□ -0.6
SMPD4-203ENST00000412570 BICD2Q8TD16 824 aa11.29□□□□□ -0.6
SMPD4-203ENST00000412570 FEZ1Q99689 392 aa11.29□□□□□ -0.6
SMPD4-203ENST00000412570 CD2APQ9Y5K6 639 aa11.29□□□□□ -0.6
SMPD4-203ENST00000412570 SPDYE2BA6NHP3 402 aa11.29□□□□□ -0.6
SMPD4-203ENST00000412570 BTBD18B2RXH4 712 aa11.29□□□□□ -0.6
SMPD4-203ENST00000412570 TULP1O00294 542 aaPredicted RBP11.29□□□□□ -0.6
SMPD4-203ENST00000412570 SPDYE6P0CI01 402 aa11.29□□□□□ -0.6
SMPD4-203ENST00000412570 USH1GQ495M9 461 aa11.29□□□□□ -0.6
SMPD4-203ENST00000412570 TRIM22Q8IYM9 498 aa11.29□□□□□ -0.6
SMPD4-203ENST00000412570 OXER1Q8TDS5 423 aa11.29□□□□□ -0.6
SMPD4-203ENST00000412570 ADAMTS3O15072 1205 aa11.29□□□□□ -0.6
SMPD4-203ENST00000412570 RRP1BQ14684 758 aaKnown RBP11.29□□□□□ -0.6
SMPD4-203ENST00000412570 ALX1Q15699 326 aa11.29□□□□□ -0.6
SMPD4-203ENST00000412570 TMEM87BQ96K49 555 aa11.29□□□□□ -0.6
SMPD4-203ENST00000412570 GGA3Q9NZ52 723 aa11.29□□□□□ -0.6
SMPD4-203ENST00000412570 HACL1Q9UJ83 578 aa11.29□□□□□ -0.6
SMPD4-203ENST00000412570 DUOX1Q9NRD9 1551 aa11.29□□□□□ -0.6
SMPD4-203ENST00000412570 BRD1O95696 1058 aa11.28□□□□□ -0.6
SMPD4-203ENST00000412570 NBPF12Q5TAG4 269 aaPredicted RBP11.28□□□□□ -0.6
SMPD4-203ENST00000412570 ZKSCAN4Q969J2 545 aaPredicted RBP11.28□□□□□ -0.6
SMPD4-203ENST00000412570 DNAJC18Q9H819 358 aa11.28□□□□□ -0.6
SMPD4-203ENST00000412570 ADAMTSL1Q8N6G6 1762 aa11.28□□□□□ -0.6
SMPD4-203ENST00000412570 KIF28PB7ZC32 967 aa11.28□□□□□ -0.6
SMPD4-203ENST00000412570 H7C1D1 291 aa11.28□□□□□ -0.6
SMPD4-203ENST00000412570 FAM217BQ9NTX9 383 aaPredicted RBP11.28□□□□□ -0.6
SMPD4-203ENST00000412570 PEX10O60683 326 aa11.28□□□□□ -0.6
SMPD4-203ENST00000412570 ME1P48163 572 aa11.28□□□□□ -0.6
SMPD4-203ENST00000412570 KIF4BQ2VIQ3 1234 aa11.28□□□□□ -0.6
SMPD4-203ENST00000412570 KRT40Q6A162 431 aa11.28□□□□□ -0.6
SMPD4-203ENST00000412570 C15orf52Q6ZUT6 534 aaKnown RBP11.28□□□□□ -0.6
SMPD4-203ENST00000412570 SRBD1Q8N5C6 995 aaKnown RBP11.28□□□□□ -0.6
SMPD4-203ENST00000412570 ACER1Q8TDN7 264 aa11.28□□□□□ -0.6
SMPD4-203ENST00000412570 COA7Q96BR5 231 aa11.28□□□□□ -0.6
SMPD4-203ENST00000412570 ZDHHC15Q96MV8 337 aa11.28□□□□□ -0.6
SMPD4-203ENST00000412570 PSMD1Q99460 953 aa11.28□□□□□ -0.6
SMPD4-203ENST00000412570 ZNF831Q5JPB2 1677 aa11.27□□□□□ -0.6
SMPD4-203ENST00000412570 SALL1Q9NSC2 1324 aa11.27□□□□□ -0.6
SMPD4-203ENST00000412570 PPP4CP60510 307 aa11.27□□□□□ -0.6
SMPD4-203ENST00000412570 ISM2Q6H9L7 571 aa11.27□□□□□ -0.6
SMPD4-203ENST00000412570 POTEIP0CG38 1075 aa11.27□□□□□ -0.61
SMPD4-203ENST00000412570 POTEJP0CG39 1038 aa11.27□□□□□ -0.61
SMPD4-203ENST00000412570 EEF2P13639 858 aaKnown RBP11.27□□□□□ -0.61
SMPD4-203ENST00000412570 ZNF274Q96GC6 653 aaPredicted RBP11.27□□□□□ -0.61
SMPD4-203ENST00000412570 INTS4Q96HW7 963 aaKnown RBP11.27□□□□□ -0.61
SMPD4-203ENST00000412570 SPATA32Q96LK8 384 aa11.27□□□□□ -0.61
SMPD4-203ENST00000412570 HOMER2Q9NSB8 354 aa11.27□□□□□ -0.61
SMPD4-203ENST00000412570 TRIM75PA6NK02 468 aa11.27□□□□□ -0.61
SMPD4-203ENST00000412570 ADM5C9JUS6 153 aa11.27□□□□□ -0.61
SMPD4-203ENST00000412570 KLRF2D3W0D1 207 aa11.27□□□□□ -0.61
SMPD4-203ENST00000412570 TNIP1Q15025 636 aa11.27□□□□□ -0.61
SMPD4-203ENST00000412570 ABCB5Q2M3G0 1257 aa11.27□□□□□ -0.61
SMPD4-203ENST00000412570 RCSD1Q6JBY9 416 aa11.27□□□□□ -0.61
SMPD4-203ENST00000412570 MKRN1Q9UHC7 482 aaKnown RBP11.27□□□□□ -0.61
SMPD4-203ENST00000412570 GAKO14976 1311 aa11.26□□□□□ -0.61
SMPD4-203ENST00000412570 VIL1P09327 827 aaKnown RBP11.26□□□□□ -0.61
SMPD4-203ENST00000412570 INPP5BP32019 993 aa11.26□□□□□ -0.61
SMPD4-203ENST00000412570 SHMT1P34896 483 aa11.26□□□□□ -0.61
SMPD4-203ENST00000412570 NLRP5P59047 1200 aa11.26□□□□□ -0.61
SMPD4-203ENST00000412570 ICA1Q05084 483 aa11.26□□□□□ -0.61
SMPD4-203ENST00000412570 HHIPL2Q6UWX4 724 aa11.26□□□□□ -0.61
SMPD4-203ENST00000412570 CABP5Q9NP86 173 aa11.26□□□□□ -0.61
SMPD4-203ENST00000412570 ZMYM6O95789 1325 aa11.26□□□□□ -0.61
SMPD4-203ENST00000412570 DDIT3P35638 169 aa11.26□□□□□ -0.61
SMPD4-203ENST00000412570 CCDC174Q6PII3 467 aa11.26□□□□□ -0.61
SMPD4-203ENST00000412570 CPXCR1Q8N123 301 aa11.26□□□□□ -0.61
SMPD4-203ENST00000412570 PIGSQ96S52 555 aa11.26□□□□□ -0.61
SMPD4-203ENST00000412570 DEFB129Q9H1M3 183 aa11.26□□□□□ -0.61
SMPD4-203ENST00000412570 PI4KBQ9UBF8 816 aa11.26□□□□□ -0.61
SMPD4-203ENST00000412570 CEP350Q5VT06 3117 aa11.26□□□□□ -0.61
SMPD4-203ENST00000412570 SEC23AQ15436 765 aa11.26□□□□□ -0.61
SMPD4-203ENST00000412570 CKAP2LQ8IYA6 745 aa11.26□□□□□ -0.61
SMPD4-203ENST00000412570 PDILTQ8N807 584 aa11.26□□□□□ -0.61
SMPD4-203ENST00000412570 USP28Q96RU2 1077 aa11.26□□□□□ -0.61
SMPD4-203ENST00000412570 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.26□□□□□ -0.61
SMPD4-203ENST00000412570 SYCE3A1L190 88 aa11.25□□□□□ -0.61
SMPD4-203ENST00000412570 SOGA3Q5TF21 947 aa11.25□□□□□ -0.61
SMPD4-203ENST00000412570 CLIC4Q9Y696 253 aa11.25□□□□□ -0.61
SMPD4-203ENST00000412570 LMNB1P20700 586 aa11.25□□□□□ -0.61
SMPD4-203ENST00000412570 PDCP20941 246 aa11.25□□□□□ -0.61
SMPD4-203ENST00000412570 SLC1A4P43007 532 aa11.25□□□□□ -0.61
SMPD4-203ENST00000412570 DIS3L2Q8IYB7 885 aaKnown RBP11.25□□□□□ -0.61
SMPD4-203ENST00000412570 KIFC2Q96AC6 838 aa11.25□□□□□ -0.61
SMPD4-203ENST00000412570 PLIN2Q99541 437 aa11.25□□□□□ -0.61
SMPD4-203ENST00000412570 SERPINA10Q9UK55 444 aa11.25□□□□□ -0.61
SMPD4-203ENST00000412570 MYH7P12883 1935 aa11.25□□□□□ -0.61
SMPD4-203ENST00000412570 LMOD1P29536 600 aaPredicted RBP11.24□□□□□ -0.61
SMPD4-203ENST00000412570 UBXN2AP68543 259 aa11.24□□□□□ -0.61
SMPD4-203ENST00000412570 TROAPQ12815 778 aa11.24□□□□□ -0.61
SMPD4-203ENST00000412570 STK38Q15208 465 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms