RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 MAP3K7CLP57077 242 aa13.38□□□□□ -0.27
SHANK2-203ENST00000409161 TPCN1Q9ULQ1 816 aa13.38□□□□□ -0.27
SHANK2-203ENST00000409161 BRDTQ58F21 947 aaPredicted RBP13.38□□□□□ -0.27
SHANK2-203ENST00000409161 RABEP2Q9H5N1 569 aa13.38□□□□□ -0.27
SHANK2-203ENST00000409161 USP26Q9BXU7 913 aa13.37□□□□□ -0.27
SHANK2-203ENST00000409161 GPTP24298 496 aa13.37□□□□□ -0.27
SHANK2-203ENST00000409161 IL9RQ01113 521 aa13.37□□□□□ -0.27
SHANK2-203ENST00000409161 RAPGEF6Q8TEU7 1601 aa13.37□□□□□ -0.27
SHANK2-203ENST00000409161 TCP1P17987 556 aaKnown RBP13.37□□□□□ -0.27
SHANK2-203ENST00000409161 APOBRQ0VD83 1088 aa13.37□□□□□ -0.27
SHANK2-203ENST00000409161 SND1Q7KZF4 910 aaKnown RBP eCLIP13.37□□□□□ -0.27
SHANK2-203ENST00000409161 ZNF710Q8N1W2 664 aa13.37□□□□□ -0.27
SHANK2-203ENST00000409161 MAGEB6Q8N7X4 407 aa13.37□□□□□ -0.27
SHANK2-203ENST00000409161 CSRNP1Q96S65 589 aa13.37□□□□□ -0.27
SHANK2-203ENST00000409161 VPS16Q9H269 839 aa13.37□□□□□ -0.27
SHANK2-203ENST00000409161 ZBTB3Q9H5J0 574 aa13.37□□□□□ -0.27
SHANK2-203ENST00000409161 CHPF2Q9P2E5 772 aa13.37□□□□□ -0.27
SHANK2-203ENST00000409161 BZW2Q9Y6E2 419 aaKnown RBP13.37□□□□□ -0.27
SHANK2-203ENST00000409161 PASKQ96RG2 1323 aa13.37□□□□□ -0.27
SHANK2-203ENST00000409161 EXOC5O00471 708 aa13.37□□□□□ -0.27
SHANK2-203ENST00000409161 SART1O43290 800 aaKnown RBP13.37□□□□□ -0.27
SHANK2-203ENST00000409161 GARSP41250 739 aaKnown RBP13.37□□□□□ -0.27
SHANK2-203ENST00000409161 SETDB2Q96T68 719 aa13.37□□□□□ -0.27
SHANK2-203ENST00000409161 APOEP02649 317 aa13.37□□□□□ -0.27
SHANK2-203ENST00000409161 CLTAP09496 248 aa13.37□□□□□ -0.27
SHANK2-203ENST00000409161 PLS1Q14651 629 aa13.37□□□□□ -0.27
SHANK2-203ENST00000409161 LRRC23Q53EV4 343 aaPredicted RBP13.37□□□□□ -0.27
SHANK2-203ENST00000409161 TRIML1Q8N9V2 468 aa13.37□□□□□ -0.27
SHANK2-203ENST00000409161 VPS37BQ9H9H4 285 aa13.37□□□□□ -0.27
SHANK2-203ENST00000409161 MCM9Q9NXL9 1143 aa13.37□□□□□ -0.27
SHANK2-203ENST00000409161 ZNF500O60304 480 aaPredicted RBP13.37□□□□□ -0.27
SHANK2-203ENST00000409161 LMNB1P20700 586 aa13.37□□□□□ -0.27
SHANK2-203ENST00000409161 RABGGTAQ92696 567 aa13.37□□□□□ -0.27
SHANK2-203ENST00000409161 SPDL1Q96EA4 605 aa13.37□□□□□ -0.27
SHANK2-203ENST00000409161 HYOU1Q9Y4L1 999 aa13.37□□□□□ -0.27
SHANK2-203ENST00000409161 ADGRL1O94910 1474 aa13.37□□□□□ -0.27
SHANK2-203ENST00000409161 GNGT1P63211 74 aa13.37□□□□□ -0.27
SHANK2-203ENST00000409161 EFCC1Q9HA90 598 aa13.37□□□□□ -0.27
SHANK2-203ENST00000409161 SKIP12755 728 aa13.36□□□□□ -0.27
SHANK2-203ENST00000409161 MMEL1Q495T6 779 aa13.36□□□□□ -0.27
SHANK2-203ENST00000409161 MCTP2Q6DN12 878 aa13.36□□□□□ -0.27
SHANK2-203ENST00000409161 CCDC197Q8NCU1 140 aa13.36□□□□□ -0.27
SHANK2-203ENST00000409161 RAD51AP2Q09MP3 1159 aa13.36□□□□□ -0.27
SHANK2-203ENST00000409161 LRRC8CQ8TDW0 803 aa13.36□□□□□ -0.27
SHANK2-203ENST00000409161 ZKSCAN8Q15776 578 aaPredicted RBP13.36□□□□□ -0.27
SHANK2-203ENST00000409161 TRIM31Q9BZY9 425 aa13.36□□□□□ -0.27
SHANK2-203ENST00000409161 CBX8Q9HC52 389 aa13.36□□□□□ -0.27
SHANK2-203ENST00000409161 TOPBP1Q92547 1522 aa13.36□□□□□ -0.27
SHANK2-203ENST00000409161 MAGEA1P43355 309 aa13.36□□□□□ -0.27
SHANK2-203ENST00000409161 ASPHQ12797 758 aa13.36□□□□□ -0.27
SHANK2-203ENST00000409161 SPC25Q9HBM1 224 aa13.36□□□□□ -0.27
SHANK2-203ENST00000409161 PIK3C2GO75747 1445 aa13.36□□□□□ -0.27
SHANK2-203ENST00000409161 ARHGEF35A5YM69 484 aa13.36□□□□□ -0.27
SHANK2-203ENST00000409161 KRIT1O00522 736 aa13.36□□□□□ -0.27
SHANK2-203ENST00000409161 ATP6V1E1P36543 226 aa13.36□□□□□ -0.27
SHANK2-203ENST00000409161 PDCD7Q8N8D1 485 aaKnown RBP13.36□□□□□ -0.27
SHANK2-203ENST00000409161 NELFBQ8WX92 580 aa13.36□□□□□ -0.27
SHANK2-203ENST00000409161 CHMLP26374 656 aa13.36□□□□□ -0.27
SHANK2-203ENST00000409161 IRX5P78411 483 aaPredicted RBP13.36□□□□□ -0.27
SHANK2-203ENST00000409161 CDKL2Q92772 493 aa13.36□□□□□ -0.27
SHANK2-203ENST00000409161 XRCC5P13010 732 aaKnown RBP13.35□□□□□ -0.27
SHANK2-203ENST00000409161 NLRP3Q96P20 1036 aa13.35□□□□□ -0.27
SHANK2-203ENST00000409161 KIFC3Q9BVG8 833 aa13.35□□□□□ -0.27
SHANK2-203ENST00000409161 ARHGEF10LQ9HCE6 1279 aa13.35□□□□□ -0.27
SHANK2-203ENST00000409161 ANGPTL2Q9UKU9 493 aa13.35□□□□□ -0.27
SHANK2-203ENST00000409161 CALCRLQ16602 461 aa13.35□□□□□ -0.27
SHANK2-203ENST00000409161 PPP1R2P3Q6NXS1 205 aa13.35□□□□□ -0.27
SHANK2-203ENST00000409161 HACE1Q8IYU2 909 aa13.35□□□□□ -0.27
SHANK2-203ENST00000409161 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.35□□□□□ -0.27
SHANK2-203ENST00000409161 CFAP61Q8NHU2 1237 aa13.35□□□□□ -0.27
SHANK2-203ENST00000409161 TRIM56Q9BRZ2 755 aaKnown RBP13.35□□□□□ -0.27
SHANK2-203ENST00000409161 NBPF14Q5TI25 921 aa13.35□□□□□ -0.27
SHANK2-203ENST00000409161 JADE1Q6IE81 842 aa13.35□□□□□ -0.27
SHANK2-203ENST00000409161 KRT25Q7Z3Z0 450 aa13.35□□□□□ -0.27
SHANK2-203ENST00000409161 CCHCR1Q8TD31 782 aa13.35□□□□□ -0.27
SHANK2-203ENST00000409161 DNM3Q9UQ16 869 aa13.35□□□□□ -0.27
SHANK2-203ENST00000409161 MAN1A2O60476 641 aa13.35□□□□□ -0.27
SHANK2-203ENST00000409161 GSTA1P08263 222 aa13.35□□□□□ -0.27
SHANK2-203ENST00000409161 GSTA2P09210 222 aa13.35□□□□□ -0.27
SHANK2-203ENST00000409161 KMT5BQ4FZB7 885 aa13.35□□□□□ -0.27
SHANK2-203ENST00000409161 TMTC3Q6ZXV5 915 aa13.35□□□□□ -0.27
SHANK2-203ENST00000409161 BCAS4Q8TDM0 211 aa13.35□□□□□ -0.27
SHANK2-203ENST00000409161 TRIM6Q9C030 488 aaPredicted RBP13.35□□□□□ -0.27
SHANK2-203ENST00000409161 MRPL44Q9H9J2 332 aaKnown RBP13.35□□□□□ -0.27
SHANK2-203ENST00000409161 TRPC6Q9Y210 931 aa13.35□□□□□ -0.27
SHANK2-203ENST00000409161 LMNAP02545 664 aaKnown RBP13.35□□□□□ -0.27
SHANK2-203ENST00000409161 LDHBP07195 334 aaKnown RBP13.35□□□□□ -0.27
SHANK2-203ENST00000409161 MX2P20592 715 aa13.35□□□□□ -0.27
SHANK2-203ENST00000409161 LONRF2Q1L5Z9 754 aa13.35□□□□□ -0.27
SHANK2-203ENST00000409161 MEIS3Q99687 375 aa13.35□□□□□ -0.27
SHANK2-203ENST00000409161 RIOK1Q9BRS2 568 aaKnown RBP13.35□□□□□ -0.27
SHANK2-203ENST00000409161 TACO1Q9BSH4 297 aaKnown RBP13.35□□□□□ -0.27
SHANK2-203ENST00000409161 BIVM-ERCC5R4GMW8 1640 aa13.35□□□□□ -0.27
SHANK2-203ENST00000409161 BAG2O95816 211 aa13.35□□□□□ -0.27
SHANK2-203ENST00000409161 STAT1P42224 750 aa13.35□□□□□ -0.27
SHANK2-203ENST00000409161 SEPT8Q92599 483 aa13.35□□□□□ -0.27
SHANK2-203ENST00000409161 NFE2L3Q9Y4A8 694 aa13.35□□□□□ -0.27
SHANK2-203ENST00000409161 SESN3P58005 492 aa13.34□□□□□ -0.27
SHANK2-203ENST00000409161 H0YCG3 227 aa13.34□□□□□ -0.27
SHANK2-203ENST00000409161 SIRT1Q96EB6 747 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms