RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 RAD50Q92878 1312 aa17.35■□□□□ 0.37
CDPF1-203ENST00000404583 PDHXO00330 501 aa17.34■□□□□ 0.37
CDPF1-203ENST00000404583 ZMYM6O95789 1325 aa17.34■□□□□ 0.37
CDPF1-203ENST00000404583 HAND2P61296 217 aa17.34■□□□□ 0.37
CDPF1-203ENST00000404583 PDE4BQ07343 736 aa17.34■□□□□ 0.37
CDPF1-203ENST00000404583 CRHR2Q13324 411 aa17.34■□□□□ 0.37
CDPF1-203ENST00000404583 TAF1CQ15572 869 aaPredicted RBP17.34■□□□□ 0.37
CDPF1-203ENST00000404583 SH3D19Q5HYK7 790 aa17.34■□□□□ 0.37
CDPF1-203ENST00000404583 CLEC10AQ8IUN9 316 aa17.34■□□□□ 0.37
CDPF1-203ENST00000404583 ZNF444Q8N0Y2 327 aaPredicted RBP17.34■□□□□ 0.37
CDPF1-203ENST00000404583 DSCC1Q9BVC3 393 aa17.34■□□□□ 0.37
CDPF1-203ENST00000404583 CFHR5Q9BXR6 569 aa17.34■□□□□ 0.37
CDPF1-203ENST00000404583 ZNF287Q9HBT7 754 aa17.34■□□□□ 0.37
CDPF1-203ENST00000404583 LOC285556D6RIA3 1793 aa17.33■□□□□ 0.37
CDPF1-203ENST00000404583 CCDC85CA6NKD9 419 aa17.33■□□□□ 0.36
CDPF1-203ENST00000404583 C19orf81C9J6K1 198 aa17.33■□□□□ 0.36
CDPF1-203ENST00000404583 SGSM2O43147 1006 aa17.33■□□□□ 0.36
CDPF1-203ENST00000404583 ZYXQ15942 572 aaKnown RBP17.33■□□□□ 0.36
CDPF1-203ENST00000404583 TREML2Q5T2D2 321 aa17.33■□□□□ 0.36
CDPF1-203ENST00000404583 PROCA1Q8NCQ7 364 aaPredicted RBP17.33■□□□□ 0.36
CDPF1-203ENST00000404583 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.33■□□□□ 0.36
CDPF1-203ENST00000404583 MCOLN1Q9GZU1 580 aa17.33■□□□□ 0.36
CDPF1-203ENST00000404583 ZCCHC17Q9NP64 241 aaKnown RBP17.33■□□□□ 0.36
CDPF1-203ENST00000404583 GREB1LQ9C091 1923 aaPredicted RBP17.32■□□□□ 0.36
CDPF1-203ENST00000404583 A0A1W2PRG0 241 aa17.32■□□□□ 0.36
CDPF1-203ENST00000404583 PTH1RQ03431 593 aa17.32■□□□□ 0.36
CDPF1-203ENST00000404583 SIAH1Q8IUQ4 282 aa17.32■□□□□ 0.36
CDPF1-203ENST00000404583 FEZ1Q99689 392 aa17.32■□□□□ 0.36
CDPF1-203ENST00000404583 ZFYVE28Q9HCC9 887 aa17.32■□□□□ 0.36
CDPF1-203ENST00000404583 EMILIN3Q9NT22 766 aa17.32■□□□□ 0.36
CDPF1-203ENST00000404583 TMOD4Q9NZQ9 345 aa17.32■□□□□ 0.36
CDPF1-203ENST00000404583 AGTPBP1Q9UPW5 1226 aa17.32■□□□□ 0.36
CDPF1-203ENST00000404583 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.32■□□□□ 0.36
CDPF1-203ENST00000404583 GPR25O00155 361 aa17.31■□□□□ 0.36
CDPF1-203ENST00000404583 ICA1Q05084 483 aa17.31■□□□□ 0.36
CDPF1-203ENST00000404583 FAM47AQ5JRC9 791 aa17.31■□□□□ 0.36
CDPF1-203ENST00000404583 USP17L2Q6R6M4 530 aa17.31■□□□□ 0.36
CDPF1-203ENST00000404583 ZNF213O14771 459 aa17.3■□□□□ 0.36
CDPF1-203ENST00000404583 CYP2C8P10632 490 aa17.3■□□□□ 0.36
CDPF1-203ENST00000404583 EEF2P13639 858 aaKnown RBP17.3■□□□□ 0.36
CDPF1-203ENST00000404583 ATP2B2Q01814 1243 aa17.3■□□□□ 0.36
CDPF1-203ENST00000404583 ESYT1Q9BSJ8 1104 aa17.3■□□□□ 0.36
CDPF1-203ENST00000404583 NBPF3Q9H094 633 aa17.3■□□□□ 0.36
CDPF1-203ENST00000404583 KIAA1683Q9H0B3 1180 aa17.3■□□□□ 0.36
CDPF1-203ENST00000404583 KANSL2Q9H9L4 492 aa17.3■□□□□ 0.36
CDPF1-203ENST00000404583 LAMA4Q16363 1823 aa17.3■□□□□ 0.36
CDPF1-203ENST00000404583 FGRP09769 529 aa17.3■□□□□ 0.36
CDPF1-203ENST00000404583 TSPY3P0CV98 308 aa17.3■□□□□ 0.36
CDPF1-203ENST00000404583 TSPY8P0CW00 308 aa17.3■□□□□ 0.36
CDPF1-203ENST00000404583 USP14P54578 494 aa17.3■□□□□ 0.36
CDPF1-203ENST00000404583 TFAP4Q01664 338 aa17.3■□□□□ 0.36
CDPF1-203ENST00000404583 RRP12Q5JTH9 1297 aaKnown RBP17.3■□□□□ 0.36
CDPF1-203ENST00000404583 ZNF296Q8WUU4 475 aaPredicted RBP17.3■□□□□ 0.36
CDPF1-203ENST00000404583 ARHGEF10LQ9HCE6 1279 aa17.3■□□□□ 0.36
CDPF1-203ENST00000404583 TOMM22Q9NS69 142 aa17.3■□□□□ 0.36
CDPF1-203ENST00000404583 CTNNA3Q9UI47 895 aa17.3■□□□□ 0.36
CDPF1-203ENST00000404583 SLC45A1Q9Y2W3 748 aa17.3■□□□□ 0.36
CDPF1-203ENST00000404583 MYH4Q9Y623 1939 aa17.29■□□□□ 0.36
CDPF1-203ENST00000404583 IGKV6D-41A0A0C4DH26 115 aa17.29■□□□□ 0.36
CDPF1-203ENST00000404583 ORC4O43929 436 aa17.29■□□□□ 0.36
CDPF1-203ENST00000404583 RANBP6O60518 1105 aaKnown RBP17.29■□□□□ 0.36
CDPF1-203ENST00000404583 TLR2O60603 784 aa17.29■□□□□ 0.36
CDPF1-203ENST00000404583 CDC45O75419 566 aa17.29■□□□□ 0.36
CDPF1-203ENST00000404583 IMMTQ16891 758 aaKnown RBP17.29■□□□□ 0.36
CDPF1-203ENST00000404583 AKNAD1Q5T1N1 836 aa17.29■□□□□ 0.36
CDPF1-203ENST00000404583 MFSD6Q6ZSS7 791 aa17.29■□□□□ 0.36
CDPF1-203ENST00000404583 TBC1D10CQ8IV04 446 aa17.29■□□□□ 0.36
CDPF1-203ENST00000404583 NEDD1Q8NHV4 660 aa17.29■□□□□ 0.36
CDPF1-203ENST00000404583 TSPY2A6NKD2 308 aa17.28■□□□□ 0.36
CDPF1-203ENST00000404583 NOM1Q5C9Z4 860 aaKnown RBP17.28■□□□□ 0.36
CDPF1-203ENST00000404583 KIAA1755Q5JYT7 1200 aa17.28■□□□□ 0.36
CDPF1-203ENST00000404583 STAG1Q8WVM7 1258 aa17.28■□□□□ 0.36
CDPF1-203ENST00000404583 CEP95Q96GE4 821 aa17.28■□□□□ 0.36
CDPF1-203ENST00000404583 C12orf42Q96LP6 360 aa17.28■□□□□ 0.36
CDPF1-203ENST00000404583 PARK7Q99497 189 aaKnown RBP17.28■□□□□ 0.36
CDPF1-203ENST00000404583 CPA4Q9UI42 421 aa17.28■□□□□ 0.36
CDPF1-203ENST00000404583 TMX2Q9Y320 296 aa17.28■□□□□ 0.36
CDPF1-203ENST00000404583 FKTNO75072 461 aa17.27■□□□□ 0.35
CDPF1-203ENST00000404583 PABPC4Q13310 644 aaKnown RBP eCLIP17.27■□□□□ 0.35
CDPF1-203ENST00000404583 KIAA1211Q6ZU35 1233 aa17.27■□□□□ 0.35
CDPF1-203ENST00000404583 NKX2-3Q8TAU0 364 aa17.27■□□□□ 0.35
CDPF1-203ENST00000404583 MAP4K1Q92918 833 aa17.27■□□□□ 0.35
CDPF1-203ENST00000404583 ASCC2Q9H1I8 757 aaPredicted RBP17.27■□□□□ 0.35
CDPF1-203ENST00000404583 MTMR4Q9NYA4 1195 aa17.27■□□□□ 0.35
CDPF1-203ENST00000404583 NYAP2Q9P242 653 aa17.27■□□□□ 0.35
CDPF1-203ENST00000404583 CLIP2Q9UDT6 1046 aa17.27■□□□□ 0.35
CDPF1-203ENST00000404583 PNMA3Q9UL41 463 aa17.27■□□□□ 0.35
CDPF1-203ENST00000404583 PLIN4Q96Q06 1357 aa17.27■□□□□ 0.35
CDPF1-203ENST00000404583 ADGRA2Q96PE1 1338 aa17.26■□□□□ 0.35
CDPF1-203ENST00000404583 VCAM1P19320 739 aa17.26■□□□□ 0.35
CDPF1-203ENST00000404583 OSBPP22059 807 aa17.26■□□□□ 0.35
CDPF1-203ENST00000404583 HOXA7P31268 230 aaPredicted RBP17.26■□□□□ 0.35
CDPF1-203ENST00000404583 CASC1Q6TDU7 716 aa17.26■□□□□ 0.35
CDPF1-203ENST00000404583 C17orf99Q6UX52 265 aa17.26■□□□□ 0.35
CDPF1-203ENST00000404583 LSG1Q9H089 658 aaKnown RBP17.26■□□□□ 0.35
CDPF1-203ENST00000404583 RNF41Q9H4P4 317 aaPredicted RBP17.26■□□□□ 0.35
CDPF1-203ENST00000404583 SH2D4AQ9H788 454 aa17.26■□□□□ 0.35
CDPF1-203ENST00000404583 VCPKMTQ9H867 229 aa17.26■□□□□ 0.35
CDPF1-203ENST00000404583 IL17RBQ9NRM6 502 aa17.26■□□□□ 0.35
CDPF1-203ENST00000404583 U3KPZ7 1027 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms