RNA–Protein interactions for RNA: ENST00000402045.5

LFNG-204, Transcript of LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase, humanhuman

TSL 1 (best) BASIC

Gene LFNG, Length 2,058 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LFNG-204ENST00000402045 PCDHAC2Q9Y5I4 1007 aa18.42■□□□□ 0.54
LFNG-204ENST00000402045 PLIN4Q96Q06 1357 aa18.42■□□□□ 0.54
LFNG-204ENST00000402045 COL4A5P29400 1685 aa18.42■□□□□ 0.54
LFNG-204ENST00000402045 PRPF3O43395 683 aaKnown RBP18.42■□□□□ 0.54
LFNG-204ENST00000402045 RBM5P52756 815 aaKnown RBP eCLIP18.42■□□□□ 0.54
LFNG-204ENST00000402045 AKAP17AQ02040 695 aaKnown RBP18.42■□□□□ 0.54
LFNG-204ENST00000402045 NFIAQ12857 509 aa18.42■□□□□ 0.54
LFNG-204ENST00000402045 LARGE2Q8N3Y3 721 aa18.42■□□□□ 0.54
LFNG-204ENST00000402045 RTEL1Q9NZ71 1219 aa18.42■□□□□ 0.54
LFNG-204ENST00000402045 GOLGB1Q14789 3259 aaKnown RBP18.41■□□□□ 0.54
LFNG-204ENST00000402045 CNTNAP5Q8WYK1 1306 aa18.41■□□□□ 0.54
LFNG-204ENST00000402045 GOLGA6L4A6NEF3 574 aa18.41■□□□□ 0.54
LFNG-204ENST00000402045 MMP1P03956 469 aa18.41■□□□□ 0.54
LFNG-204ENST00000402045 U2AF2P26368 475 aaKnown RBP eCLIP18.41■□□□□ 0.54
LFNG-204ENST00000402045 KIF5BP33176 963 aa18.41■□□□□ 0.54
LFNG-204ENST00000402045 R3HDM1Q15032 1099 aaKnown RBP18.41■□□□□ 0.54
LFNG-204ENST00000402045 SERPINB13Q9UIV8 391 aa18.41■□□□□ 0.54
LFNG-204ENST00000402045 MYO3BQ8WXR4 1341 aa18.41■□□□□ 0.54
LFNG-204ENST00000402045 PKN1Q16512 942 aa18.4■□□□□ 0.54
LFNG-204ENST00000402045 IDI2Q9BXS1 227 aa18.4■□□□□ 0.54
LFNG-204ENST00000402045 POLR3EQ9NVU0 708 aa18.4■□□□□ 0.54
LFNG-204ENST00000402045 SWAP70Q9UH65 585 aa18.4■□□□□ 0.54
LFNG-204ENST00000402045 TAOK2Q9UL54 1235 aa18.4■□□□□ 0.54
LFNG-204ENST00000402045 STX8Q9UNK0 236 aa18.4■□□□□ 0.54
LFNG-204ENST00000402045 NPM3O75607 178 aaKnown RBP18.4■□□□□ 0.54
LFNG-204ENST00000402045 HLA-DOAP06340 250 aa18.4■□□□□ 0.54
LFNG-204ENST00000402045 DALRD3Q5D0E6 543 aaKnown RBP18.4■□□□□ 0.54
LFNG-204ENST00000402045 SRBD1Q8N5C6 995 aaKnown RBP18.4■□□□□ 0.54
LFNG-204ENST00000402045 TMEM47Q9BQJ4 181 aa18.4■□□□□ 0.54
LFNG-204ENST00000402045 RBSNQ9H1K0 784 aa18.4■□□□□ 0.54
LFNG-204ENST00000402045 BRCA1P38398 1863 aaKnown RBP18.39■□□□□ 0.53
LFNG-204ENST00000402045 LIG1P18858 919 aa18.39■□□□□ 0.53
LFNG-204ENST00000402045 NOVP48745 357 aa18.39■□□□□ 0.53
LFNG-204ENST00000402045 GNL2Q13823 731 aaKnown RBP18.39■□□□□ 0.53
LFNG-204ENST00000402045 GRM4Q14833 912 aa18.39■□□□□ 0.53
LFNG-204ENST00000402045 RSBN1LQ6PCB5 846 aaPredicted RBP18.39■□□□□ 0.53
LFNG-204ENST00000402045 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.39■□□□□ 0.53
LFNG-204ENST00000402045 EHD4Q9H223 541 aa18.39■□□□□ 0.53
LFNG-204ENST00000402045 YEATS4O95619 227 aa18.38■□□□□ 0.53
LFNG-204ENST00000402045 VIL1P09327 827 aaKnown RBP18.38■□□□□ 0.53
LFNG-204ENST00000402045 NASPP49321 788 aaPredicted RBP18.38■□□□□ 0.53
LFNG-204ENST00000402045 SAFBQ15424 915 aaKnown RBP eCLIP18.38■□□□□ 0.53
LFNG-204ENST00000402045 CEP95Q96GE4 821 aa18.38■□□□□ 0.53
LFNG-204ENST00000402045 SGIP1Q9BQI5 828 aa18.38■□□□□ 0.53
LFNG-204ENST00000402045 FAM198AQ9UFP1 575 aa18.38■□□□□ 0.53
LFNG-204ENST00000402045 KCNJ14Q9UNX9 436 aa18.38■□□□□ 0.53
LFNG-204ENST00000402045 V9GY48 417 aaPredicted RBP18.38■□□□□ 0.53
LFNG-204ENST00000402045 PSMD14O00487 310 aa18.38■□□□□ 0.53
LFNG-204ENST00000402045 RAD17O75943 681 aa18.38■□□□□ 0.53
LFNG-204ENST00000402045 CACNB3P54284 484 aa18.38■□□□□ 0.53
LFNG-204ENST00000402045 CFAP100Q494V2 611 aa18.38■□□□□ 0.53
LFNG-204ENST00000402045 ZFPM1Q8IX07 1006 aa18.38■□□□□ 0.53
LFNG-204ENST00000402045 LINC00301Q8NCQ3 95 aa18.38■□□□□ 0.53
LFNG-204ENST00000402045 DHX36Q9H2U1 1008 aaKnown RBP18.38■□□□□ 0.53
LFNG-204ENST00000402045 CLIC4Q9Y696 253 aa18.38■□□□□ 0.53
LFNG-204ENST00000402045 XBP1P17861 261 aa18.37■□□□□ 0.53
LFNG-204ENST00000402045 DIS3L2Q8IYB7 885 aaKnown RBP18.37■□□□□ 0.53
LFNG-204ENST00000402045 BICD2Q8TD16 824 aa18.37■□□□□ 0.53
LFNG-204ENST00000402045 GMLQ99445 158 aa18.37■□□□□ 0.53
LFNG-204ENST00000402045 FOXP1Q9H334 677 aaPredicted RBP18.37■□□□□ 0.53
LFNG-204ENST00000402045 TSPY26PQ9H489 355 aa18.37■□□□□ 0.53
LFNG-204ENST00000402045 SHMT1P34896 483 aa18.37■□□□□ 0.53
LFNG-204ENST00000402045 GNAQP50148 359 aa18.37■□□□□ 0.53
LFNG-204ENST00000402045 ANO1Q5XXA6 986 aa18.37■□□□□ 0.53
LFNG-204ENST00000402045 NOSTRINQ8IVI9 506 aa18.37■□□□□ 0.53
LFNG-204ENST00000402045 NIM1KQ8IY84 436 aa18.37■□□□□ 0.53
LFNG-204ENST00000402045 KCNG4Q8TDN1 519 aa18.37■□□□□ 0.53
LFNG-204ENST00000402045 SHISA4Q96DD7 197 aa18.37■□□□□ 0.53
LFNG-204ENST00000402045 MAD2L2Q9UI95 211 aa18.37■□□□□ 0.53
LFNG-204ENST00000402045 ZNRF3Q9ULT6 936 aa18.37■□□□□ 0.53
LFNG-204ENST00000402045 hCG_1642624A0A1W2PR95 340 aa18.36■□□□□ 0.53
LFNG-204ENST00000402045 BTBD18B2RXH4 712 aa18.36■□□□□ 0.53
LFNG-204ENST00000402045 TOP1P11387 765 aaKnown RBP18.36■□□□□ 0.53
LFNG-204ENST00000402045 AKR1B1P15121 316 aa18.36■□□□□ 0.53
LFNG-204ENST00000402045 CD2APQ9Y5K6 639 aa18.36■□□□□ 0.53
LFNG-204ENST00000402045 IGKV6D-41A0A0C4DH26 115 aa18.35■□□□□ 0.53
LFNG-204ENST00000402045 ME1P48163 572 aa18.35■□□□□ 0.53
LFNG-204ENST00000402045 TCP10Q12799 353 aa18.35■□□□□ 0.53
LFNG-204ENST00000402045 STK38Q15208 465 aa18.35■□□□□ 0.53
LFNG-204ENST00000402045 UPF1Q92900 1129 aaKnown RBP eCLIP18.35■□□□□ 0.53
LFNG-204ENST00000402045 PHF20Q9BVI0 1012 aa18.35■□□□□ 0.53
LFNG-204ENST00000402045 VPS54Q9P1Q0 977 aa18.35■□□□□ 0.53
LFNG-204ENST00000402045 PPP1R1BQ9UD71 204 aaPredicted RBP18.35■□□□□ 0.53
LFNG-204ENST00000402045 SIPA1L1O43166 1804 aa18.35■□□□□ 0.53
LFNG-204ENST00000402045 STAG2Q8N3U4 1231 aa18.35■□□□□ 0.53
LFNG-204ENST00000402045 PRMT6Q96LA8 375 aaPredicted RBP18.35■□□□□ 0.53
LFNG-204ENST00000402045 TAOK3Q9H2K8 898 aa18.35■□□□□ 0.53
LFNG-204ENST00000402045 TDRD3Q9H7E2 651 aaKnown RBP18.35■□□□□ 0.53
LFNG-204ENST00000402045 DDX19AQ9NUU7 478 aaKnown RBP18.35■□□□□ 0.53
LFNG-204ENST00000402045 MTMR4Q9NYA4 1195 aa18.35■□□□□ 0.53
LFNG-204ENST00000402045 DACT1Q9NYF0 836 aa18.35■□□□□ 0.53
LFNG-204ENST00000402045 FER1L6Q2WGJ9 1857 aa18.35■□□□□ 0.53
LFNG-204ENST00000402045 MYH8P13535 1937 aa18.35■□□□□ 0.53
LFNG-204ENST00000402045 PALM3A6NDB9 673 aaPredicted RBP18.34■□□□□ 0.53
LFNG-204ENST00000402045 DDTLA6NHG4 134 aaPredicted RBP18.34■□□□□ 0.53
LFNG-204ENST00000402045 SCG2P13521 617 aa18.34■□□□□ 0.53
LFNG-204ENST00000402045 PFKFB3Q16875 520 aaPredicted RBP18.34■□□□□ 0.53
LFNG-204ENST00000402045 PI4KBQ9UBF8 816 aa18.34■□□□□ 0.53
LFNG-204ENST00000402045 HDAC9Q9UKV0 1011 aa18.34■□□□□ 0.53
LFNG-204ENST00000402045 COL2A1P02458 1487 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms