RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 ARGLU1Q9NWB6 273 aaPredicted RBP8.74□□□□□ -1.01
HDAC9-201ENST00000401921 SAP30BPQ9UHR5 308 aaKnown RBP8.74□□□□□ -1.01
HDAC9-201ENST00000401921 MINPP1Q9UNW1 487 aa8.74□□□□□ -1.01
HDAC9-201ENST00000401921 MARCH6O60337 910 aa8.74□□□□□ -1.01
HDAC9-201ENST00000401921 NTSR2O95665 410 aa8.74□□□□□ -1.01
HDAC9-201ENST00000401921 TFAP4Q01664 338 aa8.74□□□□□ -1.01
HDAC9-201ENST00000401921 TSR1Q2NL82 804 aaKnown RBP8.74□□□□□ -1.01
HDAC9-201ENST00000401921 AK7Q96M32 723 aa8.74□□□□□ -1.01
HDAC9-201ENST00000401921 CARD6Q9BX69 1037 aa8.74□□□□□ -1.01
HDAC9-201ENST00000401921 RNF26Q9BY78 433 aaPredicted RBP8.74□□□□□ -1.01
HDAC9-201ENST00000401921 VPS16Q9H269 839 aa8.74□□□□□ -1.01
HDAC9-201ENST00000401921 TACC3Q9Y6A5 838 aa8.74□□□□□ -1.01
HDAC9-201ENST00000401921 TSPY3P0CV98 308 aa8.74□□□□□ -1.01
HDAC9-201ENST00000401921 TSPY8P0CW00 308 aa8.74□□□□□ -1.01
HDAC9-201ENST00000401921 CHRM1P11229 460 aaPredicted RBP8.74□□□□□ -1.01
HDAC9-201ENST00000401921 TNNT3P45378 269 aaPredicted RBP8.74□□□□□ -1.01
HDAC9-201ENST00000401921 ETF1P62495 437 aaKnown RBP8.74□□□□□ -1.01
HDAC9-201ENST00000401921 C3orf67Q6ZVT6 689 aa8.74□□□□□ -1.01
HDAC9-201ENST00000401921 HEATR3Q7Z4Q2 680 aa8.74□□□□□ -1.01
HDAC9-201ENST00000401921 RASGRP4Q8TDF6 673 aa8.74□□□□□ -1.01
HDAC9-201ENST00000401921 CCDC12Q8WUD4 166 aaPredicted RBP8.74□□□□□ -1.01
HDAC9-201ENST00000401921 GPKOWQ92917 476 aaPredicted RBP eCLIP8.74□□□□□ -1.01
HDAC9-201ENST00000401921 LMTK3Q96Q04 1460 aa8.74□□□□□ -1.01
HDAC9-201ENST00000401921 BPIFA3Q9BQP9 254 aa8.74□□□□□ -1.01
HDAC9-201ENST00000401921 CDCA7Q9BWT1 371 aaPredicted RBP8.74□□□□□ -1.01
HDAC9-201ENST00000401921 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.74□□□□□ -1.01
HDAC9-201ENST00000401921 TUBE1Q9UJT0 475 aa8.74□□□□□ -1.01
HDAC9-201ENST00000401921 CALM1P0DP23 149 aa8.73□□□□□ -1.01
HDAC9-201ENST00000401921 CALM2P0DP24 149 aa8.73□□□□□ -1.01
HDAC9-201ENST00000401921 CALM3P0DP25 149 aa8.73□□□□□ -1.01
HDAC9-201ENST00000401921 KLRK1P26718 216 aa8.73□□□□□ -1.01
HDAC9-201ENST00000401921 KIF5BP33176 963 aa8.73□□□□□ -1.01
HDAC9-201ENST00000401921 MECOMQ03112 1051 aa8.73□□□□□ -1.01
HDAC9-201ENST00000401921 SPECC1LQ69YQ0 1117 aa8.73□□□□□ -1.01
HDAC9-201ENST00000401921 ZNF397Q8NF99 534 aaPredicted RBP8.73□□□□□ -1.01
HDAC9-201ENST00000401921 CNKSR2Q8WXI2 1034 aa8.73□□□□□ -1.01
HDAC9-201ENST00000401921 EEF2KMTQ96G04 330 aa8.73□□□□□ -1.01
HDAC9-201ENST00000401921 FAM84BQ96KN1 310 aaPredicted RBP8.73□□□□□ -1.01
HDAC9-201ENST00000401921 NUP88Q99567 741 aaPredicted RBP8.73□□□□□ -1.01
HDAC9-201ENST00000401921 FBXO2Q9UK22 296 aaPredicted RBP8.73□□□□□ -1.01
HDAC9-201ENST00000401921 CTNND2Q9UQB3 1225 aa8.73□□□□□ -1.01
HDAC9-201ENST00000401921 HPSEQ9Y251 543 aa8.73□□□□□ -1.01
HDAC9-201ENST00000401921 SRPRBQ9Y5M8 271 aaKnown RBP8.73□□□□□ -1.01
HDAC9-201ENST00000401921 USP17L8P0C7I0 530 aa8.73□□□□□ -1.01
HDAC9-201ENST00000401921 RFC4P35249 363 aa8.73□□□□□ -1.01
HDAC9-201ENST00000401921 UBA7P41226 1012 aa8.73□□□□□ -1.01
HDAC9-201ENST00000401921 ATP2B2Q01814 1243 aa8.73□□□□□ -1.01
HDAC9-201ENST00000401921 FMR1Q06787 632 aaKnown RBP eCLIP8.73□□□□□ -1.01
HDAC9-201ENST00000401921 TBC1D9BQ66K14 1250 aa8.73□□□□□ -1.01
HDAC9-201ENST00000401921 IGSF22Q8N9C0 903 aa8.73□□□□□ -1.01
HDAC9-201ENST00000401921 RBM28Q9NW13 759 aaKnown RBP8.73□□□□□ -1.01
HDAC9-201ENST00000401921 TNS2Q63HR2 1409 aa8.73□□□□□ -1.01
HDAC9-201ENST00000401921 COL18A1P39060 1754 aa8.73□□□□□ -1.01
HDAC9-201ENST00000401921 PNPLA7Q6ZV29 1317 aa8.72□□□□□ -1.01
HDAC9-201ENST00000401921 STK36Q9NRP7 1315 aa8.72□□□□□ -1.01
HDAC9-201ENST00000401921 G3V3G9 751 aa8.72□□□□□ -1.01
HDAC9-201ENST00000401921 NOM1Q5C9Z4 860 aaKnown RBP8.72□□□□□ -1.01
HDAC9-201ENST00000401921 DCAF8Q5TAQ9 597 aa8.72□□□□□ -1.01
HDAC9-201ENST00000401921 VSTM4Q8IW00 320 aa8.72□□□□□ -1.01
HDAC9-201ENST00000401921 IQUBQ8NA54 791 aa8.72□□□□□ -1.01
HDAC9-201ENST00000401921 DYNLL2Q96FJ2 89 aa8.72□□□□□ -1.01
HDAC9-201ENST00000401921 GPR101Q96P66 508 aaPredicted RBP8.72□□□□□ -1.01
HDAC9-201ENST00000401921 SYNRGQ9UMZ2 1314 aa8.72□□□□□ -1.01
HDAC9-201ENST00000401921 PSDA5PKW4 1024 aaPredicted RBP8.72□□□□□ -1.01
HDAC9-201ENST00000401921 ARHGAP6O43182 974 aa8.72□□□□□ -1.01
HDAC9-201ENST00000401921 CTIFO43310 598 aaKnown RBP8.72□□□□□ -1.01
HDAC9-201ENST00000401921 LDHBP07195 334 aaKnown RBP8.72□□□□□ -1.01
HDAC9-201ENST00000401921 GOLGA8HP0CJ92 632 aa8.72□□□□□ -1.01
HDAC9-201ENST00000401921 STAT6P42226 847 aa8.72□□□□□ -1.01
HDAC9-201ENST00000401921 EVX2Q03828 476 aa8.72□□□□□ -1.01
HDAC9-201ENST00000401921 CTR9Q6PD62 1173 aa8.72□□□□□ -1.01
HDAC9-201ENST00000401921 TMCO3Q6UWJ1 677 aa8.72□□□□□ -1.01
HDAC9-201ENST00000401921 TGFBRAP1Q8WUH2 860 aa8.72□□□□□ -1.01
HDAC9-201ENST00000401921 BSDC1Q9NW68 430 aaPredicted RBP8.72□□□□□ -1.01
HDAC9-201ENST00000401921 PPP2R2CQ9Y2T4 447 aa8.72□□□□□ -1.01
HDAC9-201ENST00000401921 RTCBQ9Y3I0 505 aaKnown RBP8.72□□□□□ -1.01
HDAC9-201ENST00000401921 LAMA4Q16363 1823 aa8.72□□□□□ -1.01
HDAC9-201ENST00000401921 AKR1B15C9JRZ8 316 aaPredicted RBP8.72□□□□□ -1.01
HDAC9-201ENST00000401921 BMP15O95972 392 aa8.72□□□□□ -1.01
HDAC9-201ENST00000401921 KIF4BQ2VIQ3 1234 aa8.72□□□□□ -1.01
HDAC9-201ENST00000401921 NYAP1Q6ZVC0 841 aa8.72□□□□□ -1.01
HDAC9-201ENST00000401921 MAPKAPK5Q8IW41 473 aa8.72□□□□□ -1.01
HDAC9-201ENST00000401921 OGFRQ9NZT2 677 aa8.72□□□□□ -1.01
HDAC9-201ENST00000401921 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.72□□□□□ -1.01
HDAC9-201ENST00000401921 SCG2P13521 617 aa8.71□□□□□ -1.01
HDAC9-201ENST00000401921 PPP2R5BQ15173 497 aa8.71□□□□□ -1.01
HDAC9-201ENST00000401921 DIXDC1Q155Q3 683 aa8.71□□□□□ -1.01
HDAC9-201ENST00000401921 EARS2Q5JPH6 523 aaKnown RBP8.71□□□□□ -1.01
HDAC9-201ENST00000401921 ANKRD7Q92527 254 aa8.71□□□□□ -1.01
HDAC9-201ENST00000401921 FEZ1Q99689 392 aa8.71□□□□□ -1.01
HDAC9-201ENST00000401921 NYXQ9GZU5 481 aa8.71□□□□□ -1.01
HDAC9-201ENST00000401921 PLEKHG2Q9H7P9 1386 aa8.71□□□□□ -1.01
HDAC9-201ENST00000401921 F8W031 263 aaPredicted RBP8.71□□□□□ -1.02
HDAC9-201ENST00000401921 POLR3GO15318 223 aaPredicted RBP8.71□□□□□ -1.02
HDAC9-201ENST00000401921 TEX33O43247 280 aa8.71□□□□□ -1.02
HDAC9-201ENST00000401921 PRPF3O43395 683 aaKnown RBP8.71□□□□□ -1.02
HDAC9-201ENST00000401921 BAG3O95817 575 aa8.71□□□□□ -1.02
HDAC9-201ENST00000401921 SOGA3Q5TF21 947 aa8.71□□□□□ -1.02
HDAC9-201ENST00000401921 SPTY2D1Q68D10 685 aaPredicted RBP8.71□□□□□ -1.02
HDAC9-201ENST00000401921 FBXO38Q6PIJ6 1188 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms