RNA–Protein interactions for RNA: ENST00000398636.7

SFTPA1-201, Transcript of surfactant protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFTPA1, Length 2,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1-201ENST00000398636 CDC37L1Q7L3B6 337 aa12.13□□□□□ -0.47
SFTPA1-201ENST00000398636 DHX36Q9H2U1 1008 aaKnown RBP12.13□□□□□ -0.47
SFTPA1-201ENST00000398636 PDRG1Q9NUG6 133 aa12.13□□□□□ -0.47
SFTPA1-201ENST00000398636 ANAPC4Q9UJX5 808 aa12.13□□□□□ -0.47
SFTPA1-201ENST00000398636 PPP2R3BQ9Y5P8 575 aa12.13□□□□□ -0.47
SFTPA1-201ENST00000398636 RBM8AQ9Y5S9 174 aaKnown RBP12.13□□□□□ -0.47
SFTPA1-201ENST00000398636 TAF6LQ9Y6J9 622 aa12.13□□□□□ -0.47
SFTPA1-201ENST00000398636 NBPF12Q5TAG4 269 aaPredicted RBP12.12□□□□□ -0.47
SFTPA1-201ENST00000398636 KRT26Q7Z3Y9 468 aa12.12□□□□□ -0.47
SFTPA1-201ENST00000398636 ZSCAN31Q96LW9 406 aaPredicted RBP12.12□□□□□ -0.47
SFTPA1-201ENST00000398636 NACAP1Q9BZK3 213 aa12.12□□□□□ -0.47
SFTPA1-201ENST00000398636 NAPBQ9H115 298 aa12.12□□□□□ -0.47
SFTPA1-201ENST00000398636 DNAJC18Q9H819 358 aa12.12□□□□□ -0.47
SFTPA1-201ENST00000398636 ARPP21Q9UBL0 812 aaPredicted RBP12.12□□□□□ -0.47
SFTPA1-201ENST00000398636 NRBP1Q9UHY1 535 aa12.12□□□□□ -0.47
SFTPA1-201ENST00000398636 CLEC11AQ9Y240 323 aa12.12□□□□□ -0.47
SFTPA1-201ENST00000398636 CYP46A1Q9Y6A2 500 aa12.12□□□□□ -0.47
SFTPA1-201ENST00000398636 ROBO3Q96MS0 1386 aa12.12□□□□□ -0.47
SFTPA1-201ENST00000398636 TDO2P48775 406 aa12.11□□□□□ -0.47
SFTPA1-201ENST00000398636 FMR1Q06787 632 aaKnown RBP eCLIP12.11□□□□□ -0.47
SFTPA1-201ENST00000398636 CAMK4Q16566 473 aa12.11□□□□□ -0.47
SFTPA1-201ENST00000398636 CHADLQ6NUI6 762 aa12.11□□□□□ -0.47
SFTPA1-201ENST00000398636 LUZP1Q86V48 1076 aa12.11□□□□□ -0.47
SFTPA1-201ENST00000398636 SULF1Q8IWU6 871 aa12.11□□□□□ -0.47
SFTPA1-201ENST00000398636 EHD4Q9H223 541 aa12.11□□□□□ -0.47
SFTPA1-201ENST00000398636 SH2B1Q9NRF2 756 aaPredicted RBP12.11□□□□□ -0.47
SFTPA1-201ENST00000398636 U3KPZ7 1027 aaPredicted RBP12.11□□□□□ -0.47
SFTPA1-201ENST00000398636 LAMA4Q16363 1823 aa12.11□□□□□ -0.47
SFTPA1-201ENST00000398636 LAMB1P07942 1786 aa12.11□□□□□ -0.47
SFTPA1-201ENST00000398636 CYP21A2P08686 494 aa12.11□□□□□ -0.47
SFTPA1-201ENST00000398636 FGRP09769 529 aa12.11□□□□□ -0.47
SFTPA1-201ENST00000398636 COL9A3Q14050 684 aaPredicted RBP12.11□□□□□ -0.47
SFTPA1-201ENST00000398636 FAM173BQ6P4H8 233 aa12.11□□□□□ -0.47
SFTPA1-201ENST00000398636 PI4KBQ9UBF8 816 aa12.11□□□□□ -0.47
SFTPA1-201ENST00000398636 MRVI1Q9Y6F6 885 aa12.11□□□□□ -0.47
SFTPA1-201ENST00000398636 TBC1D12O60347 775 aa12.1□□□□□ -0.47
SFTPA1-201ENST00000398636 KIF20AO95235 890 aa12.1□□□□□ -0.47
SFTPA1-201ENST00000398636 ZKSCAN1P17029 563 aaPredicted RBP12.1□□□□□ -0.47
SFTPA1-201ENST00000398636 LIG1P18858 919 aa12.1□□□□□ -0.47
SFTPA1-201ENST00000398636 PPARAQ07869 468 aa12.1□□□□□ -0.47
SFTPA1-201ENST00000398636 SLC4A8Q2Y0W8 1093 aa12.1□□□□□ -0.47
SFTPA1-201ENST00000398636 CCDC186Q7Z3E2 898 aa12.1□□□□□ -0.47
SFTPA1-201ENST00000398636 NKX2-3Q8TAU0 364 aa12.1□□□□□ -0.47
SFTPA1-201ENST00000398636 CDCA5Q96FF9 252 aa12.1□□□□□ -0.47
SFTPA1-201ENST00000398636 CSRNP1Q96S65 589 aa12.1□□□□□ -0.47
SFTPA1-201ENST00000398636 CTNNA3Q9UI47 895 aa12.1□□□□□ -0.47
SFTPA1-201ENST00000398636 TRAF5O00463 557 aa12.1□□□□□ -0.47
SFTPA1-201ENST00000398636 SLC27A2O14975 620 aa12.1□□□□□ -0.47
SFTPA1-201ENST00000398636 POLR3DP05423 398 aaPredicted RBP12.1□□□□□ -0.47
SFTPA1-201ENST00000398636 ME3Q16798 604 aa12.1□□□□□ -0.47
SFTPA1-201ENST00000398636 CREB3L3Q68CJ9 461 aa12.1□□□□□ -0.47
SFTPA1-201ENST00000398636 TTC6Q86TZ1 520 aa12.1□□□□□ -0.47
SFTPA1-201ENST00000398636 FOXP4Q8IVH2 680 aaPredicted RBP12.1□□□□□ -0.47
SFTPA1-201ENST00000398636 NECAB1Q8N987 351 aa12.1□□□□□ -0.47
SFTPA1-201ENST00000398636 DYNLL2Q96FJ2 89 aa12.1□□□□□ -0.47
SFTPA1-201ENST00000398636 C16orf45Q96MC5 204 aaPredicted RBP12.1□□□□□ -0.47
SFTPA1-201ENST00000398636 INCENPQ9NQS7 918 aa12.1□□□□□ -0.47
SFTPA1-201ENST00000398636 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.1□□□□□ -0.47
SFTPA1-201ENST00000398636 VPS37CA5D8V6 355 aaPredicted RBP12.09□□□□□ -0.47
SFTPA1-201ENST00000398636 MINDY4BA8MYZ0 360 aa12.09□□□□□ -0.47
SFTPA1-201ENST00000398636 TOMM70O94826 608 aa12.09□□□□□ -0.47
SFTPA1-201ENST00000398636 HAND2P61296 217 aa12.09□□□□□ -0.47
SFTPA1-201ENST00000398636 CTDSPL2Q05D32 466 aa12.09□□□□□ -0.47
SFTPA1-201ENST00000398636 RRP1BQ14684 758 aaKnown RBP12.09□□□□□ -0.47
SFTPA1-201ENST00000398636 TSGA10IPQ3SY00 556 aa12.09□□□□□ -0.47
SFTPA1-201ENST00000398636 C16orf86Q6ZW13 317 aa12.09□□□□□ -0.47
SFTPA1-201ENST00000398636 TBC1D10CQ8IV04 446 aa12.09□□□□□ -0.47
SFTPA1-201ENST00000398636 PASKQ96RG2 1323 aa12.09□□□□□ -0.47
SFTPA1-201ENST00000398636 PHF20L1A8MW92 1017 aa12.09□□□□□ -0.47
SFTPA1-201ENST00000398636 ZNF213O14771 459 aa12.09□□□□□ -0.47
SFTPA1-201ENST00000398636 CCDC192P0DO97 292 aa12.09□□□□□ -0.47
SFTPA1-201ENST00000398636 SHMT1P34896 483 aa12.09□□□□□ -0.47
SFTPA1-201ENST00000398636 TYRO3Q06418 890 aa12.09□□□□□ -0.47
SFTPA1-201ENST00000398636 TATDN1Q6P1N9 297 aa12.09□□□□□ -0.47
SFTPA1-201ENST00000398636 STOX1Q6ZVD7 989 aa12.09□□□□□ -0.47
SFTPA1-201ENST00000398636 FERMT3Q86UX7 667 aa12.09□□□□□ -0.47
SFTPA1-201ENST00000398636 ZSCAN29Q8IWY8 852 aaPredicted RBP12.09□□□□□ -0.47
SFTPA1-201ENST00000398636 CKAP2LQ8IYA6 745 aa12.09□□□□□ -0.47
SFTPA1-201ENST00000398636 SLC44A5Q8NCS7 719 aa12.09□□□□□ -0.47
SFTPA1-201ENST00000398636 RBM46Q8TBY0 533 aaKnown RBP12.09□□□□□ -0.47
SFTPA1-201ENST00000398636 SERPINB13Q9UIV8 391 aa12.09□□□□□ -0.47
SFTPA1-201ENST00000398636 TAOK2Q9UL54 1235 aa12.09□□□□□ -0.47
SFTPA1-201ENST00000398636 PAPPA2Q9BXP8 1791 aa12.08□□□□□ -0.48
SFTPA1-201ENST00000398636 FAM196BA6NMK8 535 aa12.08□□□□□ -0.48
SFTPA1-201ENST00000398636 TPM3P06753 285 aa12.08□□□□□ -0.48
SFTPA1-201ENST00000398636 IMMTQ16891 758 aaKnown RBP12.08□□□□□ -0.48
SFTPA1-201ENST00000398636 MIGA2Q7L4E1 593 aa12.08□□□□□ -0.48
SFTPA1-201ENST00000398636 FAM200AQ8TCP9 573 aa12.08□□□□□ -0.48
SFTPA1-201ENST00000398636 HERC5Q9UII4 1024 aaKnown RBP12.08□□□□□ -0.48
SFTPA1-201ENST00000398636 ZNF112Q9UJU3 913 aa12.08□□□□□ -0.48
SFTPA1-201ENST00000398636 USP2O75604 605 aaPredicted RBP12.07□□□□□ -0.48
SFTPA1-201ENST00000398636 HLA-DOAP06340 250 aa12.07□□□□□ -0.48
SFTPA1-201ENST00000398636 CDK8P49336 464 aa12.07□□□□□ -0.48
SFTPA1-201ENST00000398636 SUPT20HL1Q3ZLR7 823 aa12.07□□□□□ -0.48
SFTPA1-201ENST00000398636 STAG1Q8WVM7 1258 aa12.07□□□□□ -0.48
SFTPA1-201ENST00000398636 CBX8Q9HC52 389 aa12.07□□□□□ -0.48
SFTPA1-201ENST00000398636 TPCN1Q9ULQ1 816 aa12.07□□□□□ -0.48
SFTPA1-201ENST00000398636 FZD1Q9UP38 647 aa12.07□□□□□ -0.48
SFTPA1-201ENST00000398636 GOLGA6L6A8MZA4 724 aa12.07□□□□□ -0.48
SFTPA1-201ENST00000398636 PSMA5P28066 241 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms