RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 LONP1P36776 959 aaKnown RBP17.4■□□□□ 0.38
GNE-202ENST00000396594 CABP7Q86V35 215 aa17.4■□□□□ 0.38
GNE-202ENST00000396594 ERO1AQ96HE7 468 aa17.4■□□□□ 0.38
GNE-202ENST00000396594 CCNA1P78396 465 aa17.4■□□□□ 0.38
GNE-202ENST00000396594 FAM98CQ17RN3 349 aaKnown RBP17.4■□□□□ 0.38
GNE-202ENST00000396594 GPCPD1Q9NPB8 672 aa17.4■□□□□ 0.38
GNE-202ENST00000396594 IFNKQ9P0W0 207 aa17.4■□□□□ 0.38
GNE-202ENST00000396594 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.4■□□□□ 0.38
GNE-202ENST00000396594 FAM169AQ9Y6X4 670 aa17.4■□□□□ 0.38
GNE-202ENST00000396594 PPIP5K2O43314 1243 aa17.4■□□□□ 0.38
GNE-202ENST00000396594 ZNF174Q15697 407 aa17.4■□□□□ 0.38
GNE-202ENST00000396594 AOC3Q16853 763 aa17.4■□□□□ 0.38
GNE-202ENST00000396594 LGSNQ5TDP6 509 aa17.4■□□□□ 0.38
GNE-202ENST00000396594 SRGAP1Q7Z6B7 1085 aa17.4■□□□□ 0.38
GNE-202ENST00000396594 ZBTB8OSQ8IWT0 167 aa17.4■□□□□ 0.38
GNE-202ENST00000396594 ZNF830Q96NB3 372 aaPredicted RBP17.4■□□□□ 0.38
GNE-202ENST00000396594 ADGRB3O60242 1522 aa17.4■□□□□ 0.38
GNE-202ENST00000396594 RNF17Q9BXT8 1623 aaKnown RBP17.4■□□□□ 0.38
GNE-202ENST00000396594 MAP7Q14244 749 aa17.4■□□□□ 0.38
GNE-202ENST00000396594 SEPT2Q15019 361 aa17.4■□□□□ 0.38
GNE-202ENST00000396594 ZNF654Q8IZM8 581 aa17.4■□□□□ 0.38
GNE-202ENST00000396594 RAB3IL1Q8TBN0 382 aa17.4■□□□□ 0.38
GNE-202ENST00000396594 CDHR1Q96JP9 859 aa17.4■□□□□ 0.38
GNE-202ENST00000396594 ADRA2BP18089 450 aa17.39■□□□□ 0.37
GNE-202ENST00000396594 BIRC3Q13489 604 aa17.39■□□□□ 0.37
GNE-202ENST00000396594 C10orf67Q8IYJ2 551 aa17.39■□□□□ 0.37
GNE-202ENST00000396594 NOD1Q9Y239 953 aa17.39■□□□□ 0.37
GNE-202ENST00000396594 GOLGA6CA6NDK9 693 aa17.39■□□□□ 0.37
GNE-202ENST00000396594 GOLGA6BA6NDN3 693 aa17.39■□□□□ 0.37
GNE-202ENST00000396594 LPXNO60711 386 aa17.39■□□□□ 0.37
GNE-202ENST00000396594 GOLGA6DP0CG33 693 aa17.39■□□□□ 0.37
GNE-202ENST00000396594 POSTNQ15063 836 aa17.39■□□□□ 0.37
GNE-202ENST00000396594 HDXQ7Z353 690 aa17.39■□□□□ 0.37
GNE-202ENST00000396594 CCDC50Q8IVM0 306 aa17.39■□□□□ 0.37
GNE-202ENST00000396594 LARP6Q9BRS8 491 aaKnown RBP17.39■□□□□ 0.37
GNE-202ENST00000396594 GOLGA6AQ9NYA3 693 aa17.39■□□□□ 0.37
GNE-202ENST00000396594 CCDC125Q86Z20 511 aa17.39■□□□□ 0.37
GNE-202ENST00000396594 TRMT2AQ8IZ69 625 aaKnown RBP17.39■□□□□ 0.37
GNE-202ENST00000396594 LEO1Q8WVC0 666 aaPredicted RBP17.39■□□□□ 0.37
GNE-202ENST00000396594 XPOTO43592 962 aaKnown RBP17.39■□□□□ 0.37
GNE-202ENST00000396594 APBA3O96018 575 aa17.39■□□□□ 0.37
GNE-202ENST00000396594 FAM160B1Q5W0V3 765 aa17.39■□□□□ 0.37
GNE-202ENST00000396594 ZSWIM6Q9HCJ5 1215 aa17.39■□□□□ 0.37
GNE-202ENST00000396594 ZAP70P43403 619 aa17.38■□□□□ 0.37
GNE-202ENST00000396594 PPP2R5AQ15172 486 aa17.38■□□□□ 0.37
GNE-202ENST00000396594 PPP1R7Q15435 360 aa17.38■□□□□ 0.37
GNE-202ENST00000396594 IGSF22Q8N9C0 903 aa17.38■□□□□ 0.37
GNE-202ENST00000396594 IFT122Q9HBG6 1241 aa17.38■□□□□ 0.37
GNE-202ENST00000396594 PLCB1Q9NQ66 1216 aa17.38■□□□□ 0.37
GNE-202ENST00000396594 USP40Q9NVE5 1235 aa17.38■□□□□ 0.37
GNE-202ENST00000396594 AATFQ9NY61 560 aaKnown RBP eCLIP17.38■□□□□ 0.37
GNE-202ENST00000396594 POLR2MP0CAP2 368 aa17.38■□□□□ 0.37
GNE-202ENST00000396594 TRPM1Q7Z4N2 1603 aa17.38■□□□□ 0.37
GNE-202ENST00000396594 INF2Q27J81 1249 aa17.38■□□□□ 0.37
GNE-202ENST00000396594 NSMCE1Q8WV22 266 aa17.38■□□□□ 0.37
GNE-202ENST00000396594 CEP63Q96MT8 703 aa17.38■□□□□ 0.37
GNE-202ENST00000396594 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.38■□□□□ 0.37
GNE-202ENST00000396594 CTNND2Q9UQB3 1225 aa17.38■□□□□ 0.37
GNE-202ENST00000396594 RCAN1P53805 252 aa17.38■□□□□ 0.37
GNE-202ENST00000396594 TFAP4Q01664 338 aa17.38■□□□□ 0.37
GNE-202ENST00000396594 SEMA3FQ13275 785 aa17.38■□□□□ 0.37
GNE-202ENST00000396594 CCDC122Q5T0U0 273 aa17.38■□□□□ 0.37
GNE-202ENST00000396594 CARMIL3Q8ND23 1372 aa17.37■□□□□ 0.37
GNE-202ENST00000396594 MYO3BQ8WXR4 1341 aa17.37■□□□□ 0.37
GNE-202ENST00000396594 BLIDQ8IZY5 108 aa17.37■□□□□ 0.37
GNE-202ENST00000396594 TCEANC2Q96MN5 208 aa17.37■□□□□ 0.37
GNE-202ENST00000396594 PLEKHF1Q96S99 279 aa17.37■□□□□ 0.37
GNE-202ENST00000396594 SAP30BPQ9UHR5 308 aaKnown RBP17.37■□□□□ 0.37
GNE-202ENST00000396594 A0A1W2PQ27 194 aa17.37■□□□□ 0.37
GNE-202ENST00000396594 A0A1W2PQ64 194 aa17.37■□□□□ 0.37
GNE-202ENST00000396594 A0A1W2PQD8 194 aa17.37■□□□□ 0.37
GNE-202ENST00000396594 IFNL3Q8IZI9 196 aa17.37■□□□□ 0.37
GNE-202ENST00000396594 GJA3Q9Y6H8 435 aa17.37■□□□□ 0.37
GNE-202ENST00000396594 LOC102724428A0A0B4J2F2 783 aa17.37■□□□□ 0.37
GNE-202ENST00000396594 GAP43P17677 238 aa17.37■□□□□ 0.37
GNE-202ENST00000396594 SIK1P57059 783 aa17.37■□□□□ 0.37
GNE-202ENST00000396594 ORC2Q13416 577 aaPredicted RBP17.37■□□□□ 0.37
GNE-202ENST00000396594 MFSD14BQ5SR56 506 aa17.37■□□□□ 0.37
GNE-202ENST00000396594 RNF187Q5TA31 235 aaPredicted RBP17.37■□□□□ 0.37
GNE-202ENST00000396594 RUFY4Q6ZNE9 571 aa17.37■□□□□ 0.37
GNE-202ENST00000396594 CDC37L1Q7L3B6 337 aa17.37■□□□□ 0.37
GNE-202ENST00000396594 FAM204AQ9H8W3 233 aa17.37■□□□□ 0.37
GNE-202ENST00000396594 PDE8BO95263 885 aa17.37■□□□□ 0.37
GNE-202ENST00000396594 MYCNP04198 464 aaPredicted RBP17.37■□□□□ 0.37
GNE-202ENST00000396594 VIMP08670 466 aaKnown RBP17.37■□□□□ 0.37
GNE-202ENST00000396594 ALCAMQ13740 583 aa17.37■□□□□ 0.37
GNE-202ENST00000396594 IFT20Q8IY31 132 aa17.37■□□□□ 0.37
GNE-202ENST00000396594 USP44Q9H0E7 712 aa17.37■□□□□ 0.37
GNE-202ENST00000396594 NR1I2O75469 434 aa17.36■□□□□ 0.37
GNE-202ENST00000396594 PDE6AP16499 860 aa17.36■□□□□ 0.37
GNE-202ENST00000396594 MRPS9P82933 396 aaKnown RBP17.36■□□□□ 0.37
GNE-202ENST00000396594 KRT24Q2M2I5 525 aa17.36■□□□□ 0.37
GNE-202ENST00000396594 IL17REQ8NFR9 667 aa17.36■□□□□ 0.37
GNE-202ENST00000396594 TIGD1Q96MW7 591 aa17.36■□□□□ 0.37
GNE-202ENST00000396594 BEGAINQ9BUH8 593 aa17.36■□□□□ 0.37
GNE-202ENST00000396594 RNF26Q9BY78 433 aaPredicted RBP17.36■□□□□ 0.37
GNE-202ENST00000396594 PTCH1Q13635 1447 aa17.36■□□□□ 0.37
GNE-202ENST00000396594 HEG1Q9ULI3 1381 aa17.36■□□□□ 0.37
GNE-202ENST00000396594 PSDA5PKW4 1024 aaPredicted RBP17.36■□□□□ 0.37
GNE-202ENST00000396594 RBM6P78332 1123 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms