RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 TMEM47Q9BQJ4 181 aa14.84□□□□□ -0.03
TRIM39-204ENST00000396548 MAP3K10Q02779 954 aa14.83□□□□□ -0.03
TRIM39-204ENST00000396548 MICALL2Q8IY33 904 aa14.83□□□□□ -0.03
TRIM39-204ENST00000396548 GBP4Q96PP9 640 aa14.83□□□□□ -0.03
TRIM39-204ENST00000396548 PPFIA3O75145 1194 aa14.83□□□□□ -0.04
TRIM39-204ENST00000396548 CDKL5O76039 1030 aa14.83□□□□□ -0.04
TRIM39-204ENST00000396548 FOXD4L5Q5VV16 416 aaPredicted RBP14.83□□□□□ -0.04
TRIM39-204ENST00000396548 GPC2Q8N158 579 aa14.83□□□□□ -0.04
TRIM39-204ENST00000396548 FOXD4L4Q8WXT5 416 aaPredicted RBP14.83□□□□□ -0.04
TRIM39-204ENST00000396548 PHKBQ93100 1093 aa14.83□□□□□ -0.04
TRIM39-204ENST00000396548 MTMR4Q9NYA4 1195 aa14.83□□□□□ -0.04
TRIM39-204ENST00000396548 CNOT7Q9UIV1 285 aaKnown RBP14.83□□□□□ -0.04
TRIM39-204ENST00000396548 TCP10L2B9ZVM9 353 aa14.83□□□□□ -0.04
TRIM39-204ENST00000396548 UBE2Q2LH0YL09 131 aa14.83□□□□□ -0.04
TRIM39-204ENST00000396548 RESTQ13127 1097 aa14.83□□□□□ -0.04
TRIM39-204ENST00000396548 RRP1BQ14684 758 aaKnown RBP14.83□□□□□ -0.04
TRIM39-204ENST00000396548 RBM28Q9NW13 759 aaKnown RBP14.83□□□□□ -0.04
TRIM39-204ENST00000396548 ORC3Q9UBD5 711 aaPredicted RBP14.83□□□□□ -0.04
TRIM39-204ENST00000396548 TMTC3Q6ZXV5 915 aa14.82□□□□□ -0.04
TRIM39-204ENST00000396548 PNMA1Q8ND90 353 aa14.82□□□□□ -0.04
TRIM39-204ENST00000396548 CCDC196A0A1B0GTZ2 297 aa14.82□□□□□ -0.04
TRIM39-204ENST00000396548 CPLX1O14810 134 aa14.82□□□□□ -0.04
TRIM39-204ENST00000396548 GUCY1A2P33402 732 aa14.82□□□□□ -0.04
TRIM39-204ENST00000396548 NBR1Q14596 966 aa14.82□□□□□ -0.04
TRIM39-204ENST00000396548 GRM4Q14833 912 aa14.82□□□□□ -0.04
TRIM39-204ENST00000396548 ANP32EQ9BTT0 268 aa14.82□□□□□ -0.04
TRIM39-204ENST00000396548 MAD2L2Q9UI95 211 aa14.82□□□□□ -0.04
TRIM39-204ENST00000396548 TBC1D12O60347 775 aa14.81□□□□□ -0.04
TRIM39-204ENST00000396548 PLEKHA8P1O95397 391 aa14.81□□□□□ -0.04
TRIM39-204ENST00000396548 FAM184AQ8NB25 1140 aa14.81□□□□□ -0.04
TRIM39-204ENST00000396548 CCDC17Q96LX7 622 aa14.81□□□□□ -0.04
TRIM39-204ENST00000396548 KAT14Q9H8E8 782 aa14.81□□□□□ -0.04
TRIM39-204ENST00000396548 ATAD5Q96QE3 1844 aa14.81□□□□□ -0.04
TRIM39-204ENST00000396548 FAM196BA6NMK8 535 aa14.81□□□□□ -0.04
TRIM39-204ENST00000396548 JAG1P78504 1218 aa14.81□□□□□ -0.04
TRIM39-204ENST00000396548 SHROOM1Q2M3G4 852 aaPredicted RBP14.81□□□□□ -0.04
TRIM39-204ENST00000396548 CDAN1Q8IWY9 1227 aa14.81□□□□□ -0.04
TRIM39-204ENST00000396548 SRBD1Q8N5C6 995 aaKnown RBP14.81□□□□□ -0.04
TRIM39-204ENST00000396548 NUP133Q8WUM0 1156 aa14.81□□□□□ -0.04
TRIM39-204ENST00000396548 TEPSINQ96N21 525 aa14.81□□□□□ -0.04
TRIM39-204ENST00000396548 GJA3Q9Y6H8 435 aa14.81□□□□□ -0.04
TRIM39-204ENST00000396548 VPS37CA5D8V6 355 aaPredicted RBP14.81□□□□□ -0.04
TRIM39-204ENST00000396548 PKN1Q16512 942 aa14.81□□□□□ -0.04
TRIM39-204ENST00000396548 SLC35G1Q2M3R5 365 aa14.81□□□□□ -0.04
TRIM39-204ENST00000396548 SAMD7Q7Z3H4 446 aa14.81□□□□□ -0.04
TRIM39-204ENST00000396548 SIAH1Q8IUQ4 282 aa14.81□□□□□ -0.04
TRIM39-204ENST00000396548 CMTR1Q8N1G2 835 aaKnown RBP14.81□□□□□ -0.04
TRIM39-204ENST00000396548 FBXO18Q8NFZ0 1043 aa14.81□□□□□ -0.04
TRIM39-204ENST00000396548 SHISA4Q96DD7 197 aa14.81□□□□□ -0.04
TRIM39-204ENST00000396548 AIFM3Q96NN9 605 aa14.81□□□□□ -0.04
TRIM39-204ENST00000396548 CSRNP1Q96S65 589 aa14.81□□□□□ -0.04
TRIM39-204ENST00000396548 GPRC5DQ9NZD1 345 aa14.81□□□□□ -0.04
TRIM39-204ENST00000396548 TMOD2Q9NZR1 351 aa14.81□□□□□ -0.04
TRIM39-204ENST00000396548 HERC5Q9UII4 1024 aaKnown RBP14.81□□□□□ -0.04
TRIM39-204ENST00000396548 CNTNAP5Q8WYK1 1306 aa14.8□□□□□ -0.04
TRIM39-204ENST00000396548 PALM3A6NDB9 673 aaPredicted RBP14.8□□□□□ -0.04
TRIM39-204ENST00000396548 TOP1P11387 765 aaKnown RBP14.8□□□□□ -0.04
TRIM39-204ENST00000396548 TMEM39BQ9GZU3 492 aa14.8□□□□□ -0.04
TRIM39-204ENST00000396548 KIF3AQ9Y496 699 aa14.8□□□□□ -0.04
TRIM39-204ENST00000396548 ASTN2O75129 1339 aaPredicted RBP14.8□□□□□ -0.04
TRIM39-204ENST00000396548 SNHG28P0DPA3 235 aa14.8□□□□□ -0.04
TRIM39-204ENST00000396548 SSRP1Q08945 709 aaKnown RBP14.8□□□□□ -0.04
TRIM39-204ENST00000396548 RNF26Q9BY78 433 aaPredicted RBP14.8□□□□□ -0.04
TRIM39-204ENST00000396548 LMBRD1Q9NUN5 540 aa14.8□□□□□ -0.04
TRIM39-204ENST00000396548 DDX11L8A8MPP1 907 aa14.79□□□□□ -0.04
TRIM39-204ENST00000396548 PRPF3O43395 683 aaKnown RBP14.79□□□□□ -0.04
TRIM39-204ENST00000396548 CPLX2Q6PUV4 134 aaKnown RBP14.79□□□□□ -0.04
TRIM39-204ENST00000396548 TMEM87AQ8NBN3 555 aa14.79□□□□□ -0.04
TRIM39-204ENST00000396548 GJB4Q9NTQ9 266 aa14.79□□□□□ -0.04
TRIM39-204ENST00000396548 MYO1BO43795 1136 aa14.79□□□□□ -0.04
TRIM39-204ENST00000396548 CERKLQ49MI3 558 aaPredicted RBP14.79□□□□□ -0.04
TRIM39-204ENST00000396548 ZSCAN29Q8IWY8 852 aaPredicted RBP14.79□□□□□ -0.04
TRIM39-204ENST00000396548 MKL1Q969V6 931 aa14.79□□□□□ -0.04
TRIM39-204ENST00000396548 SLC26A6Q9BXS9 759 aa14.79□□□□□ -0.04
TRIM39-204ENST00000396548 KIF4BQ2VIQ3 1234 aa14.79□□□□□ -0.04
TRIM39-204ENST00000396548 STAG2Q8N3U4 1231 aa14.79□□□□□ -0.04
TRIM39-204ENST00000396548 STX8Q9UNK0 236 aa14.79□□□□□ -0.04
TRIM39-204ENST00000396548 TTLL1O95922 423 aa14.78□□□□□ -0.04
TRIM39-204ENST00000396548 MCTP1Q6DN14 999 aa14.78□□□□□ -0.04
TRIM39-204ENST00000396548 RASGRP2Q7LDG7 609 aa14.78□□□□□ -0.04
TRIM39-204ENST00000396548 CLEC10AQ8IUN9 316 aa14.78□□□□□ -0.04
TRIM39-204ENST00000396548 ALG1Q9BT22 464 aa14.78□□□□□ -0.04
TRIM39-204ENST00000396548 ZSCAN16Q9H4T2 348 aaPredicted RBP14.78□□□□□ -0.04
TRIM39-204ENST00000396548 VEZTQ9HBM0 779 aa14.78□□□□□ -0.04
TRIM39-204ENST00000396548 DEXIO95424 95 aa14.78□□□□□ -0.04
TRIM39-204ENST00000396548 TBC1D10BQ4KMP7 808 aaPredicted RBP14.78□□□□□ -0.04
TRIM39-204ENST00000396548 C8orf76Q96K31 380 aa14.78□□□□□ -0.04
TRIM39-204ENST00000396548 HACL1Q9UJ83 578 aa14.78□□□□□ -0.04
TRIM39-204ENST00000396548 PAPPA2Q9BXP8 1791 aa14.77□□□□□ -0.04
TRIM39-204ENST00000396548 HIRAP54198 1017 aaPredicted RBP14.77□□□□□ -0.04
TRIM39-204ENST00000396548 OTUD7BQ6GQQ9 843 aa14.77□□□□□ -0.04
TRIM39-204ENST00000396548 TRPM4Q8TD43 1214 aa14.77□□□□□ -0.04
TRIM39-204ENST00000396548 NYAP2Q9P242 653 aa14.77□□□□□ -0.04
TRIM39-204ENST00000396548 FERMT3Q86UX7 667 aa14.77□□□□□ -0.05
TRIM39-204ENST00000396548 CTCFLQ8NI51 663 aaPredicted RBP14.77□□□□□ -0.05
TRIM39-204ENST00000396548 RNF181Q9P0P0 153 aa14.77□□□□□ -0.05
TRIM39-204ENST00000396548 H3BQV1 296 aa14.77□□□□□ -0.05
TRIM39-204ENST00000396548 CYTH3O43739 400 aa14.77□□□□□ -0.05
TRIM39-204ENST00000396548 IFFO2Q5TF58 517 aa14.77□□□□□ -0.05
TRIM39-204ENST00000396548 TMEM179Q6ZVK1 233 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms