RNA–Protein interactions for RNA: ENST00000396205.6

LMO3-205, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 3,534 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-205ENST00000396205 USP17L11C9JVI0 530 aa7.91□□□□□ -1.14
LMO3-205ENST00000396205 USP17L18D6R9N7 530 aa7.91□□□□□ -1.14
LMO3-205ENST00000396205 USP17L22D6RA61 530 aa7.91□□□□□ -1.14
LMO3-205ENST00000396205 USP17L17D6RBQ6 530 aa7.91□□□□□ -1.14
LMO3-205ENST00000396205 USP17L19D6RCP7 530 aa7.91□□□□□ -1.14
LMO3-205ENST00000396205 USP17L20D6RJB6 530 aa7.91□□□□□ -1.14
LMO3-205ENST00000396205 MBD4O95243 580 aa7.91□□□□□ -1.14
LMO3-205ENST00000396205 HOXC6P09630 235 aa7.91□□□□□ -1.14
LMO3-205ENST00000396205 MAPK4P31152 587 aa7.91□□□□□ -1.14
LMO3-205ENST00000396205 PLCD1P51178 756 aa7.91□□□□□ -1.14
LMO3-205ENST00000396205 MFAP1P55081 439 aaKnown RBP7.91□□□□□ -1.14
LMO3-205ENST00000396205 USP17L24Q0WX57 530 aa7.91□□□□□ -1.14
LMO3-205ENST00000396205 CRACR2BQ8N4Y2 399 aaPredicted RBP7.91□□□□□ -1.14
LMO3-205ENST00000396205 PUS7LQ9H0K6 701 aaKnown RBP7.91□□□□□ -1.14
LMO3-205ENST00000396205 EMILIN3Q9NT22 766 aa7.91□□□□□ -1.14
LMO3-205ENST00000396205 NRBP1Q9UHY1 535 aa7.91□□□□□ -1.14
LMO3-205ENST00000396205 RABGAP1Q9Y3P9 1069 aa7.91□□□□□ -1.14
LMO3-205ENST00000396205 WDR46O15213 610 aaKnown RBP7.91□□□□□ -1.14
LMO3-205ENST00000396205 ORC4O43929 436 aa7.91□□□□□ -1.14
LMO3-205ENST00000396205 GRM1Q13255 1194 aa7.91□□□□□ -1.14
LMO3-205ENST00000396205 UBE2Q1Q7Z7E8 422 aa7.91□□□□□ -1.14
LMO3-205ENST00000396205 NBPF11Q86T75 865 aa7.91□□□□□ -1.14
LMO3-205ENST00000396205 ANKLE1Q8NAG6 615 aa7.91□□□□□ -1.14
LMO3-205ENST00000396205 NKX2-3Q8TAU0 364 aa7.91□□□□□ -1.14
LMO3-205ENST00000396205 CD99L2Q8TCZ2 262 aa7.91□□□□□ -1.14
LMO3-205ENST00000396205 DNAJC2Q99543 621 aaKnown RBP7.91□□□□□ -1.14
LMO3-205ENST00000396205 CABP5Q9NP86 173 aa7.91□□□□□ -1.14
LMO3-205ENST00000396205 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.91□□□□□ -1.14
LMO3-205ENST00000396205 JAG1P78504 1218 aa7.91□□□□□ -1.14
LMO3-205ENST00000396205 CHD1LQ86WJ1 897 aa7.91□□□□□ -1.14
LMO3-205ENST00000396205 ASCC2Q9H1I8 757 aaPredicted RBP7.91□□□□□ -1.14
LMO3-205ENST00000396205 KANSL2Q9H9L4 492 aa7.91□□□□□ -1.14
LMO3-205ENST00000396205 TREML2Q5T2D2 321 aa7.9□□□□□ -1.14
LMO3-205ENST00000396205 MIGA1Q8NAN2 632 aa7.9□□□□□ -1.14
LMO3-205ENST00000396205 OSBP2Q969R2 916 aa7.9□□□□□ -1.14
LMO3-205ENST00000396205 TRIM47Q96LD4 638 aa7.9□□□□□ -1.14
LMO3-205ENST00000396205 FOXP2O15409 715 aa7.9□□□□□ -1.14
LMO3-205ENST00000396205 GPAA1O43292 621 aa7.9□□□□□ -1.14
LMO3-205ENST00000396205 OAZ1P54368 228 aa7.9□□□□□ -1.14
LMO3-205ENST00000396205 MORN1Q5T089 497 aa7.9□□□□□ -1.14
LMO3-205ENST00000396205 MAP3K21Q5TCX8 1036 aa7.9□□□□□ -1.14
LMO3-205ENST00000396205 ARHGEF10LQ9HCE6 1279 aa7.9□□□□□ -1.14
LMO3-205ENST00000396205 EPB41L4AQ9HCS5 686 aaPredicted RBP7.9□□□□□ -1.14
LMO3-205ENST00000396205 MCM9Q9NXL9 1143 aa7.9□□□□□ -1.14
LMO3-205ENST00000396205 TSKSQ9UJT2 592 aa7.9□□□□□ -1.14
LMO3-205ENST00000396205 LOC102724159A0A0B4J2E5 919 aa7.9□□□□□ -1.15
LMO3-205ENST00000396205 CNMDO75829 334 aa7.9□□□□□ -1.15
LMO3-205ENST00000396205 CTGFP29279 349 aa7.9□□□□□ -1.15
LMO3-205ENST00000396205 CDK8P49336 464 aa7.9□□□□□ -1.15
LMO3-205ENST00000396205 CAP1Q01518 475 aa7.9□□□□□ -1.15
LMO3-205ENST00000396205 MTMR2Q13614 643 aa7.9□□□□□ -1.15
LMO3-205ENST00000396205 PWP2Q15269 919 aaKnown RBP7.9□□□□□ -1.15
LMO3-205ENST00000396205 MSL3Q8N5Y2 521 aaKnown RBP7.9□□□□□ -1.15
LMO3-205ENST00000396205 NACAP1Q9BZK3 213 aa7.9□□□□□ -1.15
LMO3-205ENST00000396205 CRISPLD2Q9H0B8 497 aa7.9□□□□□ -1.15
LMO3-205ENST00000396205 VCPKMTQ9H867 229 aa7.9□□□□□ -1.15
LMO3-205ENST00000396205 ARMT1Q9H993 441 aa7.9□□□□□ -1.15
LMO3-205ENST00000396205 GJD2Q9UKL4 321 aa7.9□□□□□ -1.15
LMO3-205ENST00000396205 LCTP09848 1927 aa7.89□□□□□ -1.15
LMO3-205ENST00000396205 SMARCA5O60264 1052 aaPredicted RBP7.89□□□□□ -1.15
LMO3-205ENST00000396205 POLR3DP05423 398 aaPredicted RBP7.89□□□□□ -1.15
LMO3-205ENST00000396205 SPP2Q13103 211 aa7.89□□□□□ -1.15
LMO3-205ENST00000396205 SIAH1Q8IUQ4 282 aa7.89□□□□□ -1.15
LMO3-205ENST00000396205 PLEKHM2Q8IWE5 1019 aa7.89□□□□□ -1.15
LMO3-205ENST00000396205 PAK6Q9NQU5 681 aaPredicted RBP7.89□□□□□ -1.15
LMO3-205ENST00000396205 PNMA2Q9UL42 364 aa7.89□□□□□ -1.15
LMO3-205ENST00000396205 TRIM17Q9Y577 477 aa7.89□□□□□ -1.15
LMO3-205ENST00000396205 SLC4A4Q9Y6R1 1079 aa7.89□□□□□ -1.15
LMO3-205ENST00000396205 ALPK3Q96L96 1907 aa7.89□□□□□ -1.15
LMO3-205ENST00000396205 M0R2C6 588 aa7.89□□□□□ -1.15
LMO3-205ENST00000396205 GH2P01242 217 aa7.89□□□□□ -1.15
LMO3-205ENST00000396205 VCAM1P19320 739 aa7.89□□□□□ -1.15
LMO3-205ENST00000396205 HERVK_113P62684 666 aa7.89□□□□□ -1.15
LMO3-205ENST00000396205 OLFML2BQ68BL8 750 aa7.89□□□□□ -1.15
LMO3-205ENST00000396205 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.89□□□□□ -1.15
LMO3-205ENST00000396205 DIS3Q9Y2L1 958 aaKnown RBP7.89□□□□□ -1.15
LMO3-205ENST00000396205 SLC3A2P08195 630 aaKnown RBP7.89□□□□□ -1.15
LMO3-205ENST00000396205 RASA1P20936 1047 aa7.89□□□□□ -1.15
LMO3-205ENST00000396205 MKRN3Q13064 507 aaKnown RBP7.89□□□□□ -1.15
LMO3-205ENST00000396205 IFNL3Q8IZI9 196 aa7.89□□□□□ -1.15
LMO3-205ENST00000396205 NEDD1Q8NHV4 660 aa7.89□□□□□ -1.15
LMO3-205ENST00000396205 GMCL1Q96IK5 515 aa7.89□□□□□ -1.15
LMO3-205ENST00000396205 MTA3Q9BTC8 594 aa7.89□□□□□ -1.15
LMO3-205ENST00000396205 GOPCQ9HD26 462 aa7.89□□□□□ -1.15
LMO3-205ENST00000396205 HOXC10Q9NYD6 342 aa7.89□□□□□ -1.15
LMO3-205ENST00000396205 ZNFX1Q9P2E3 1918 aaKnown RBP7.88□□□□□ -1.15
LMO3-205ENST00000396205 SLC15A5A6NIM6 579 aa7.88□□□□□ -1.15
LMO3-205ENST00000396205 STRNO43815 780 aa7.88□□□□□ -1.15
LMO3-205ENST00000396205 HMGCS2P54868 508 aa7.88□□□□□ -1.15
LMO3-205ENST00000396205 CCNA1P78396 465 aa7.88□□□□□ -1.15
LMO3-205ENST00000396205 GRB14Q14449 540 aa7.88□□□□□ -1.15
LMO3-205ENST00000396205 GADL1Q6ZQY3 521 aa7.88□□□□□ -1.15
LMO3-205ENST00000396205 GPRC5AQ8NFJ5 357 aa7.88□□□□□ -1.15
LMO3-205ENST00000396205 ANKS1AQ92625 1134 aa7.88□□□□□ -1.15
LMO3-205ENST00000396205 DSCC1Q9BVC3 393 aa7.88□□□□□ -1.15
LMO3-205ENST00000396205 TRIM75PA6NK02 468 aa7.88□□□□□ -1.15
LMO3-205ENST00000396205 ERVK-9P63128 1117 aa7.88□□□□□ -1.15
LMO3-205ENST00000396205 ERVK-24P63145 666 aa7.88□□□□□ -1.15
LMO3-205ENST00000396205 MCMDC2Q4G0Z9 681 aa7.88□□□□□ -1.15
LMO3-205ENST00000396205 CCDC178Q5BJE1 867 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms