RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 ATF5Q9Y2D1 282 aaPredicted RBP18.15■□□□□ 0.5
SMARCD1-202ENST00000394963 PCDHA5Q9Y5H7 936 aa18.15■□□□□ 0.5
SMARCD1-202ENST00000394963 GDF11O95390 407 aa18.15■□□□□ 0.5
SMARCD1-202ENST00000394963 UBASH3AP57075 661 aa18.15■□□□□ 0.5
SMARCD1-202ENST00000394963 SLC39A14Q15043 492 aa18.15■□□□□ 0.5
SMARCD1-202ENST00000394963 COL23A1Q86Y22 540 aaPredicted RBP18.15■□□□□ 0.5
SMARCD1-202ENST00000394963 TBC1D16Q8TBP0 767 aa18.15■□□□□ 0.5
SMARCD1-202ENST00000394963 TCP10L2B9ZVM9 353 aa18.14■□□□□ 0.5
SMARCD1-202ENST00000394963 MMP1P03956 469 aa18.14■□□□□ 0.5
SMARCD1-202ENST00000394963 DDR1Q08345 913 aa18.14■□□□□ 0.5
SMARCD1-202ENST00000394963 KCTD1Q719H9 257 aa18.14■□□□□ 0.5
SMARCD1-202ENST00000394963 RAD51AP2Q09MP3 1159 aa18.14■□□□□ 0.49
SMARCD1-202ENST00000394963 USH1GQ495M9 461 aa18.14■□□□□ 0.49
SMARCD1-202ENST00000394963 RC3H1Q5TC82 1133 aaKnown RBP18.14■□□□□ 0.49
SMARCD1-202ENST00000394963 ZFP91Q96JP5 570 aaPredicted RBP18.14■□□□□ 0.49
SMARCD1-202ENST00000394963 RFX7Q2KHR2 1363 aa18.14■□□□□ 0.49
SMARCD1-202ENST00000394963 YEATS4O95619 227 aa18.14■□□□□ 0.49
SMARCD1-202ENST00000394963 ILDR1Q86SU0 546 aaPredicted RBP18.14■□□□□ 0.49
SMARCD1-202ENST00000394963 COA7Q96BR5 231 aa18.14■□□□□ 0.49
SMARCD1-202ENST00000394963 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.14■□□□□ 0.49
SMARCD1-202ENST00000394963 PYCARDQ9ULZ3 195 aa18.14■□□□□ 0.49
SMARCD1-202ENST00000394963 V9GYY5 206 aaPredicted RBP18.14■□□□□ 0.49
SMARCD1-202ENST00000394963 ELP1O95163 1332 aa18.14■□□□□ 0.49
SMARCD1-202ENST00000394963 SPATA31A6Q5VVP1 1343 aa18.14■□□□□ 0.49
SMARCD1-202ENST00000394963 BBOX1O75936 387 aa18.13■□□□□ 0.49
SMARCD1-202ENST00000394963 SKILP12757 684 aa18.13■□□□□ 0.49
SMARCD1-202ENST00000394963 SRBD1Q8N5C6 995 aaKnown RBP18.13■□□□□ 0.49
SMARCD1-202ENST00000394963 FAM170AA1A519 330 aa18.13■□□□□ 0.49
SMARCD1-202ENST00000394963 ATP1A3P13637 1013 aa18.13■□□□□ 0.49
SMARCD1-202ENST00000394963 SFPQP23246 707 aaKnown RBP eCLIP18.13■□□□□ 0.49
SMARCD1-202ENST00000394963 TXKP42681 527 aa18.13■□□□□ 0.49
SMARCD1-202ENST00000394963 TMOD2Q9NZR1 351 aa18.13■□□□□ 0.49
SMARCD1-202ENST00000394963 CCNT1O60563 726 aaKnown RBP18.12■□□□□ 0.49
SMARCD1-202ENST00000394963 CALM1P0DP23 149 aa18.12■□□□□ 0.49
SMARCD1-202ENST00000394963 CALM2P0DP24 149 aa18.12■□□□□ 0.49
SMARCD1-202ENST00000394963 CALM3P0DP25 149 aa18.12■□□□□ 0.49
SMARCD1-202ENST00000394963 SCG2P13521 617 aa18.12■□□□□ 0.49
SMARCD1-202ENST00000394963 CDK8P49336 464 aa18.12■□□□□ 0.49
SMARCD1-202ENST00000394963 NBPF11Q86T75 865 aa18.12■□□□□ 0.49
SMARCD1-202ENST00000394963 LARGE2Q8N3Y3 721 aa18.12■□□□□ 0.49
SMARCD1-202ENST00000394963 AP5Z1O43299 807 aa18.12■□□□□ 0.49
SMARCD1-202ENST00000394963 TPM3P06753 285 aa18.12■□□□□ 0.49
SMARCD1-202ENST00000394963 AOC3Q16853 763 aa18.12■□□□□ 0.49
SMARCD1-202ENST00000394963 RRAGBQ5VZM2 374 aa18.12■□□□□ 0.49
SMARCD1-202ENST00000394963 ZNF512BQ96KM6 892 aaPredicted RBP18.12■□□□□ 0.49
SMARCD1-202ENST00000394963 ALDH8A1Q9H2A2 487 aaPredicted RBP18.12■□□□□ 0.49
SMARCD1-202ENST00000394963 STK32BQ9NY57 414 aa18.12■□□□□ 0.49
SMARCD1-202ENST00000394963 ECM2O94769 699 aaPredicted RBP18.11■□□□□ 0.49
SMARCD1-202ENST00000394963 STAT6P42226 847 aa18.11■□□□□ 0.49
SMARCD1-202ENST00000394963 ZNF75DP51815 510 aa18.11■□□□□ 0.49
SMARCD1-202ENST00000394963 PRKG1Q13976 671 aa18.11■□□□□ 0.49
SMARCD1-202ENST00000394963 CCDC178Q5BJE1 867 aa18.11■□□□□ 0.49
SMARCD1-202ENST00000394963 PCDHAC2Q9Y5I4 1007 aa18.11■□□□□ 0.49
SMARCD1-202ENST00000394963 ZBTB7AO95365 584 aa18.11■□□□□ 0.49
SMARCD1-202ENST00000394963 KRT18P05783 430 aaKnown RBP18.11■□□□□ 0.49
SMARCD1-202ENST00000394963 CCT6AP40227 531 aaKnown RBP18.11■□□□□ 0.49
SMARCD1-202ENST00000394963 XPO4Q9C0E2 1151 aaKnown RBP18.11■□□□□ 0.49
SMARCD1-202ENST00000394963 POLR3EQ9NVU0 708 aa18.11■□□□□ 0.49
SMARCD1-202ENST00000394963 SMTNL1A8MU46 457 aa18.11■□□□□ 0.49
SMARCD1-202ENST00000394963 TOP1P11387 765 aaKnown RBP18.11■□□□□ 0.49
SMARCD1-202ENST00000394963 HSP90AA2PQ14568 343 aaPredicted RBP18.11■□□□□ 0.49
SMARCD1-202ENST00000394963 TEKT1Q969V4 418 aa18.11■□□□□ 0.49
SMARCD1-202ENST00000394963 ENOX2Q16206 610 aaKnown RBP18.1■□□□□ 0.49
SMARCD1-202ENST00000394963 SHC4Q6S5L8 630 aa18.1■□□□□ 0.49
SMARCD1-202ENST00000394963 FCHSD1Q86WN1 690 aa18.1■□□□□ 0.49
SMARCD1-202ENST00000394963 RRP36Q96EU6 259 aaKnown RBP18.1■□□□□ 0.49
SMARCD1-202ENST00000394963 CEP95Q96GE4 821 aa18.1■□□□□ 0.49
SMARCD1-202ENST00000394963 FAM217BQ9NTX9 383 aaPredicted RBP18.1■□□□□ 0.49
SMARCD1-202ENST00000394963 RBM28Q9NW13 759 aaKnown RBP18.1■□□□□ 0.49
SMARCD1-202ENST00000394963 PNPLA7Q6ZV29 1317 aa18.1■□□□□ 0.49
SMARCD1-202ENST00000394963 ALX1Q15699 326 aa18.1■□□□□ 0.49
SMARCD1-202ENST00000394963 OGFOD1Q8N543 542 aa18.1■□□□□ 0.49
SMARCD1-202ENST00000394963 ZNF384Q8TF68 577 aa18.1■□□□□ 0.49
SMARCD1-202ENST00000394963 PIGSQ96S52 555 aa18.1■□□□□ 0.49
SMARCD1-202ENST00000394963 CTDP1Q9Y5B0 961 aaPredicted RBP18.1■□□□□ 0.49
SMARCD1-202ENST00000394963 DISP2A7MBM2 1401 aa18.1■□□□□ 0.49
SMARCD1-202ENST00000394963 SMCO2A6NFE2 343 aa18.1■□□□□ 0.49
SMARCD1-202ENST00000394963 CMA1P23946 247 aa18.1■□□□□ 0.49
SMARCD1-202ENST00000394963 ZNF76P36508 570 aa18.1■□□□□ 0.49
SMARCD1-202ENST00000394963 KARSQ15046 597 aaKnown RBP18.1■□□□□ 0.49
SMARCD1-202ENST00000394963 MIGA2Q7L4E1 593 aa18.1■□□□□ 0.49
SMARCD1-202ENST00000394963 SGMS1Q86VZ5 419 aa18.1■□□□□ 0.49
SMARCD1-202ENST00000394963 SYMPKQ92797 1274 aaKnown RBP18.1■□□□□ 0.49
SMARCD1-202ENST00000394963 TMEM47Q9BQJ4 181 aa18.1■□□□□ 0.49
SMARCD1-202ENST00000394963 BRIP1Q9BX63 1249 aa18.1■□□□□ 0.49
SMARCD1-202ENST00000394963 TDRD3Q9H7E2 651 aaKnown RBP18.1■□□□□ 0.49
SMARCD1-202ENST00000394963 GJA3Q9Y6H8 435 aa18.1■□□□□ 0.49
SMARCD1-202ENST00000394963 COL18A1P39060 1754 aa18.1■□□□□ 0.49
SMARCD1-202ENST00000394963 PP2D1A8MPX8 630 aa18.09■□□□□ 0.49
SMARCD1-202ENST00000394963 TNNT1P13805 278 aa18.09■□□□□ 0.49
SMARCD1-202ENST00000394963 PLCG2P16885 1265 aa18.09■□□□□ 0.49
SMARCD1-202ENST00000394963 ALDH1B1P30837 517 aa18.09■□□□□ 0.49
SMARCD1-202ENST00000394963 EZH2Q15910 746 aaKnown RBP18.09■□□□□ 0.49
SMARCD1-202ENST00000394963 FANCLQ9NW38 375 aa18.09■□□□□ 0.49
SMARCD1-202ENST00000394963 PKD2L1Q9P0L9 805 aa18.09■□□□□ 0.49
SMARCD1-202ENST00000394963 PDE6BP35913 854 aa18.09■□□□□ 0.49
SMARCD1-202ENST00000394963 RBM6P78332 1123 aaKnown RBP18.09■□□□□ 0.49
SMARCD1-202ENST00000394963 EARS2Q5JPH6 523 aaKnown RBP18.09■□□□□ 0.49
SMARCD1-202ENST00000394963 FEZ1Q99689 392 aa18.09■□□□□ 0.49
SMARCD1-202ENST00000394963 ZBTB12Q9Y330 459 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms