RNA–Protein interactions for RNA: ENST00000393384.3

CRAT-202, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 2 BASIC

Gene CRAT, Length 973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-202ENST00000393384 TAOK2Q9UL54 1235 aa22.99■■□□□ 1.27
CRAT-202ENST00000393384 PCDHB15Q9Y5E8 787 aa22.99■■□□□ 1.27
CRAT-202ENST00000393384 SHMT1P34896 483 aa22.98■■□□□ 1.27
CRAT-202ENST00000393384 GABPAQ06546 454 aa22.98■■□□□ 1.27
CRAT-202ENST00000393384 ABCB5Q2M3G0 1257 aa22.98■■□□□ 1.27
CRAT-202ENST00000393384 SLFNL1Q499Z3 407 aa22.98■■□□□ 1.27
CRAT-202ENST00000393384 ZSCAN25Q6NSZ9 544 aa22.98■■□□□ 1.27
CRAT-202ENST00000393384 USP17L2Q6R6M4 530 aa22.97■■□□□ 1.27
CRAT-202ENST00000393384 CABP5Q9NP86 173 aa22.97■■□□□ 1.27
CRAT-202ENST00000393384 ATP8A2Q9NTI2 1148 aa22.97■■□□□ 1.27
CRAT-202ENST00000393384 MBD4O95243 580 aa22.96■■□□□ 1.27
CRAT-202ENST00000393384 IRX3P78415 501 aaPredicted RBP22.96■■□□□ 1.27
CRAT-202ENST00000393384 GPATCH3Q96I76 525 aa22.96■■□□□ 1.27
CRAT-202ENST00000393384 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.96■■□□□ 1.27
CRAT-202ENST00000393384 EMILIN3Q9NT22 766 aa22.96■■□□□ 1.27
CRAT-202ENST00000393384 PLXNB2O15031 1838 aa22.95■■□□□ 1.26
CRAT-202ENST00000393384 RAB3GAP1Q15042 981 aa22.95■■□□□ 1.26
CRAT-202ENST00000393384 NECAB2Q7Z6G3 386 aa22.95■■□□□ 1.26
CRAT-202ENST00000393384 PAWRQ96IZ0 340 aaKnown RBP22.95■■□□□ 1.26
CRAT-202ENST00000393384 PRKAB2O43741 272 aa22.94■■□□□ 1.26
CRAT-202ENST00000393384 HMGCRP04035 888 aa22.94■■□□□ 1.26
CRAT-202ENST00000393384 CHGBP05060 677 aa22.94■■□□□ 1.26
CRAT-202ENST00000393384 USP14P54578 494 aa22.94■■□□□ 1.26
CRAT-202ENST00000393384 ANKLE1Q8NAG6 615 aa22.94■■□□□ 1.26
CRAT-202ENST00000393384 C12orf42Q96LP6 360 aa22.94■■□□□ 1.26
CRAT-202ENST00000393384 P2RX7Q99572 595 aaKnown RBP22.94■■□□□ 1.26
CRAT-202ENST00000393384 MORF4L1Q9UBU8 362 aa22.94■■□□□ 1.26
CRAT-202ENST00000393384 EVX2Q03828 476 aa22.93■■□□□ 1.26
CRAT-202ENST00000393384 FEZ1Q99689 392 aa22.93■■□□□ 1.26
CRAT-202ENST00000393384 SWAP70Q9UH65 585 aa22.93■■□□□ 1.26
CRAT-202ENST00000393384 LAMA3Q16787 3333 aa22.93■■□□□ 1.26
CRAT-202ENST00000393384 CYP2D6P10635 497 aa22.92■■□□□ 1.26
CRAT-202ENST00000393384 GUCY1A2P33402 732 aa22.92■■□□□ 1.26
CRAT-202ENST00000393384 HERVK_113P62684 666 aa22.92■■□□□ 1.26
CRAT-202ENST00000393384 KBTBD3Q8NAB2 608 aa22.92■■□□□ 1.26
CRAT-202ENST00000393384 YTHDC1Q96MU7 727 aaKnown RBP22.92■■□□□ 1.26
CRAT-202ENST00000393384 KIAA1683Q9H0B3 1180 aa22.92■■□□□ 1.26
CRAT-202ENST00000393384 PUS7LQ9H0K6 701 aaKnown RBP22.92■■□□□ 1.26
CRAT-202ENST00000393384 TTC41PQ6P2S7 1318 aa22.91■■□□□ 1.26
CRAT-202ENST00000393384 ALPK3Q96L96 1907 aa22.91■■□□□ 1.26
CRAT-202ENST00000393384 AMOTL1Q8IY63 956 aa22.91■■□□□ 1.26
CRAT-202ENST00000393384 DIS3LQ8TF46 1054 aaKnown RBP22.91■■□□□ 1.26
CRAT-202ENST00000393384 GTF3C2Q8WUA4 911 aaPredicted RBP22.91■■□□□ 1.26
CRAT-202ENST00000393384 DDRGK1Q96HY6 314 aa22.91■■□□□ 1.26
CRAT-202ENST00000393384 CRBNQ96SW2 442 aa22.91■■□□□ 1.26
CRAT-202ENST00000393384 STAP2Q9UGK3 403 aa22.91■■□□□ 1.26
CRAT-202ENST00000393384 SLC4A4Q9Y6R1 1079 aa22.91■■□□□ 1.26
CRAT-202ENST00000393384 RPTORQ8N122 1335 aa22.9■■□□□ 1.26
CRAT-202ENST00000393384 SEPT2Q15019 361 aa22.9■■□□□ 1.26
CRAT-202ENST00000393384 ZYXQ15942 572 aaKnown RBP22.9■■□□□ 1.26
CRAT-202ENST00000393384 C12orf60Q5U649 245 aa22.9■■□□□ 1.26
CRAT-202ENST00000393384 TSHZ3Q63HK5 1081 aa22.9■■□□□ 1.26
CRAT-202ENST00000393384 GPRC5AQ8NFJ5 357 aa22.9■■□□□ 1.26
CRAT-202ENST00000393384 ACER1Q8TDN7 264 aa22.9■■□□□ 1.26
CRAT-202ENST00000393384 HMX1Q9NP08 348 aaPredicted RBP22.9■■□□□ 1.26
CRAT-202ENST00000393384 GJD2Q9UKL4 321 aa22.9■■□□□ 1.26
CRAT-202ENST00000393384 USP17L15C9J2P7 530 aa22.89■■□□□ 1.25
CRAT-202ENST00000393384 USP17L13C9JLJ4 530 aa22.89■■□□□ 1.25
CRAT-202ENST00000393384 USP17L11C9JVI0 530 aa22.89■■□□□ 1.25
CRAT-202ENST00000393384 USP17L18D6R9N7 530 aa22.89■■□□□ 1.25
CRAT-202ENST00000393384 USP17L22D6RA61 530 aa22.89■■□□□ 1.25
CRAT-202ENST00000393384 USP17L17D6RBQ6 530 aa22.89■■□□□ 1.25
CRAT-202ENST00000393384 USP17L19D6RCP7 530 aa22.89■■□□□ 1.25
CRAT-202ENST00000393384 USP17L20D6RJB6 530 aa22.89■■□□□ 1.25
CRAT-202ENST00000393384 MPHOSPH10O00566 681 aaKnown RBP22.89■■□□□ 1.25
CRAT-202ENST00000393384 USP17L24Q0WX57 530 aa22.89■■□□□ 1.25
CRAT-202ENST00000393384 DYNLL2Q96FJ2 89 aa22.89■■□□□ 1.25
CRAT-202ENST00000393384 TXNRD2Q9NNW7 524 aa22.89■■□□□ 1.25
CRAT-202ENST00000393384 RBPJLQ9UBG7 517 aa22.89■■□□□ 1.25
CRAT-202ENST00000393384 USP17L12C9JPN9 530 aa22.88■■□□□ 1.25
CRAT-202ENST00000393384 USP17L21D6R901 530 aa22.88■■□□□ 1.25
CRAT-202ENST00000393384 SOX1O00570 391 aaPredicted RBP22.88■■□□□ 1.25
CRAT-202ENST00000393384 ERC2O15083 957 aa22.88■■□□□ 1.25
CRAT-202ENST00000393384 ZFYP08048 801 aaPredicted RBP22.88■■□□□ 1.25
CRAT-202ENST00000393384 CATSPERGQ6ZRH7 1159 aa22.88■■□□□ 1.25
CRAT-202ENST00000393384 TMEM179Q6ZVK1 233 aa22.88■■□□□ 1.25
CRAT-202ENST00000393384 SLC44A5Q8NCS7 719 aa22.88■■□□□ 1.25
CRAT-202ENST00000393384 STRBPQ96SI9 672 aaKnown RBP22.88■■□□□ 1.25
CRAT-202ENST00000393384 NBPF3Q9H094 633 aa22.88■■□□□ 1.25
CRAT-202ENST00000393384 RNF113AO15541 343 aaKnown RBP22.87■■□□□ 1.25
CRAT-202ENST00000393384 VCAM1P19320 739 aa22.87■■□□□ 1.25
CRAT-202ENST00000393384 BMP8BP34820 402 aa22.87■■□□□ 1.25
CRAT-202ENST00000393384 SLC17A8Q8NDX2 589 aa22.87■■□□□ 1.25
CRAT-202ENST00000393384 APPBP2Q92624 585 aa22.87■■□□□ 1.25
CRAT-202ENST00000393384 GDF15Q99988 308 aa22.87■■□□□ 1.25
CRAT-202ENST00000393384 CYP2D7A0A087X1C5 515 aa22.86■■□□□ 1.25
CRAT-202ENST00000393384 CDK8P49336 464 aa22.86■■□□□ 1.25
CRAT-202ENST00000393384 ERVK-9P63128 1117 aa22.86■■□□□ 1.25
CRAT-202ENST00000393384 ERVK-24P63145 666 aa22.86■■□□□ 1.25
CRAT-202ENST00000393384 LRRFIP1Q32MZ4 808 aaKnown RBP22.86■■□□□ 1.25
CRAT-202ENST00000393384 Q3C1V9 767 aa22.86■■□□□ 1.25
CRAT-202ENST00000393384 CTR9Q6PD62 1173 aa22.86■■□□□ 1.25
CRAT-202ENST00000393384 C16orf86Q6ZW13 317 aa22.86■■□□□ 1.25
CRAT-202ENST00000393384 C7orf61Q8IZ16 206 aa22.86■■□□□ 1.25
CRAT-202ENST00000393384 PI4K2BQ8TCG2 481 aa22.86■■□□□ 1.25
CRAT-202ENST00000393384 LRCH3Q96II8 777 aa22.86■■□□□ 1.25
CRAT-202ENST00000393384 CCDC17Q96LX7 622 aa22.86■■□□□ 1.25
CRAT-202ENST00000393384 ARPP21Q9UBL0 812 aaPredicted RBP22.86■■□□□ 1.25
CRAT-202ENST00000393384 RLFQ13129 1914 aa22.86■■□□□ 1.25
CRAT-202ENST00000393384 PARP14Q460N5 1801 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms