RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 NEDD1Q8NHV4 660 aa24.73■■□□□ 1.55
SPHK1-202ENST00000392496 DDX4Q9NQI0 724 aaKnown RBP24.73■■□□□ 1.55
SPHK1-202ENST00000392496 POLR3EQ9NVU0 708 aa24.73■■□□□ 1.55
SPHK1-202ENST00000392496 KIF5BP33176 963 aa24.72■■□□□ 1.55
SPHK1-202ENST00000392496 KIAA0825Q8IV33 1275 aa24.72■■□□□ 1.55
SPHK1-202ENST00000392496 FHDC1Q9C0D6 1143 aaPredicted RBP24.72■■□□□ 1.55
SPHK1-202ENST00000392496 PLEKHA8P1O95397 391 aa24.72■■□□□ 1.55
SPHK1-202ENST00000392496 YEATS4O95619 227 aa24.72■■□□□ 1.55
SPHK1-202ENST00000392496 MMP1P03956 469 aa24.72■■□□□ 1.55
SPHK1-202ENST00000392496 GABPAQ06546 454 aa24.72■■□□□ 1.55
SPHK1-202ENST00000392496 SAFBQ15424 915 aaKnown RBP eCLIP24.72■■□□□ 1.55
SPHK1-202ENST00000392496 FTOQ9C0B1 505 aaKnown RBP eCLIP24.72■■□□□ 1.555e-7■□□□□ 8.3
SPHK1-202ENST00000392496 OSBPL5Q9H0X9 879 aaPredicted RBP24.72■■□□□ 1.55
SPHK1-202ENST00000392496 VPS33BQ9H267 617 aa24.72■■□□□ 1.55
SPHK1-202ENST00000392496 SERPINA10Q9UK55 444 aa24.72■■□□□ 1.55
SPHK1-202ENST00000392496 NASPP49321 788 aaPredicted RBP24.71■■□□□ 1.55
SPHK1-202ENST00000392496 GNL2Q13823 731 aaKnown RBP24.71■■□□□ 1.55
SPHK1-202ENST00000392496 SOGA3Q5TF21 947 aa24.71■■□□□ 1.55
SPHK1-202ENST00000392496 PNMA1Q8ND90 353 aa24.71■■□□□ 1.55
SPHK1-202ENST00000392496 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.71■■□□□ 1.55
SPHK1-202ENST00000392496 PIM2Q9P1W9 311 aa24.7■■□□□ 1.55
SPHK1-202ENST00000392496 CNTNAP5Q8WYK1 1306 aa24.7■■□□□ 1.54
SPHK1-202ENST00000392496 YDJCA8MPS7 323 aa24.7■■□□□ 1.54
SPHK1-202ENST00000392496 XBP1P17861 261 aa24.7■■□□□ 1.54
SPHK1-202ENST00000392496 LIG1P18858 919 aa24.7■■□□□ 1.54
SPHK1-202ENST00000392496 PKN1Q16512 942 aa24.7■■□□□ 1.54
SPHK1-202ENST00000392496 BICD2Q8TD16 824 aa24.7■■□□□ 1.54
SPHK1-202ENST00000392496 SWAP70Q9UH65 585 aa24.7■■□□□ 1.54
SPHK1-202ENST00000392496 PLIN4Q96Q06 1357 aa24.69■■□□□ 1.54
SPHK1-202ENST00000392496 MYO3BQ8WXR4 1341 aa24.69■■□□□ 1.54
SPHK1-202ENST00000392496 SRBD1Q8N5C6 995 aaKnown RBP24.69■■□□□ 1.54
SPHK1-202ENST00000392496 LINC00301Q8NCQ3 95 aa24.69■■□□□ 1.54
SPHK1-202ENST00000392496 KCNG4Q8TDN1 519 aa24.69■■□□□ 1.54
SPHK1-202ENST00000392496 FOXP1Q9H334 677 aaPredicted RBP24.69■■□□□ 1.54
SPHK1-202ENST00000392496 DDX19AQ9NUU7 478 aaKnown RBP24.69■■□□□ 1.54
SPHK1-202ENST00000392496 NPM3O75607 178 aaKnown RBP24.68■■□□□ 1.54
SPHK1-202ENST00000392496 GRM4Q14833 912 aa24.68■■□□□ 1.54
SPHK1-202ENST00000392496 ANO1Q5XXA6 986 aa24.68■■□□□ 1.54
SPHK1-202ENST00000392496 CLIC4Q9Y696 253 aa24.68■■□□□ 1.54
SPHK1-202ENST00000392496 V9GY48 417 aaPredicted RBP24.68■■□□□ 1.54
SPHK1-202ENST00000392496 NOVP48745 357 aa24.67■■□□□ 1.54
SPHK1-202ENST00000392496 GNAQP50148 359 aa24.67■■□□□ 1.54
SPHK1-202ENST00000392496 STK38Q15208 465 aa24.67■■□□□ 1.54
SPHK1-202ENST00000392496 DIS3L2Q8IYB7 885 aaKnown RBP24.67■■□□□ 1.54
SPHK1-202ENST00000392496 TMEM47Q9BQJ4 181 aa24.67■■□□□ 1.54
SPHK1-202ENST00000392496 SYT17Q9BSW7 474 aa24.67■■□□□ 1.54
SPHK1-202ENST00000392496 IDI2Q9BXS1 227 aa24.67■■□□□ 1.54
SPHK1-202ENST00000392496 SERPINB13Q9UIV8 391 aa24.67■■□□□ 1.54
SPHK1-202ENST00000392496 MYH8P13535 1937 aa24.67■■□□□ 1.54
SPHK1-202ENST00000392496 HLA-DOAP06340 250 aa24.67■■□□□ 1.54
SPHK1-202ENST00000392496 TSPY26PQ9H489 355 aa24.67■■□□□ 1.54
SPHK1-202ENST00000392496 STX8Q9UNK0 236 aa24.67■■□□□ 1.54
SPHK1-202ENST00000392496 KCNJ14Q9UNX9 436 aa24.67■■□□□ 1.54
SPHK1-202ENST00000392496 RBM5P52756 815 aaKnown RBP eCLIP24.66■■□□□ 1.54
SPHK1-202ENST00000392496 NOSTRINQ8IVI9 506 aa24.66■■□□□ 1.54
SPHK1-202ENST00000392496 EHD4Q9H223 541 aa24.66■■□□□ 1.54
SPHK1-202ENST00000392496 ME1P48163 572 aa24.65■■□□□ 1.54
SPHK1-202ENST00000392496 NFIAQ12857 509 aa24.65■■□□□ 1.54
SPHK1-202ENST00000392496 LARGE2Q8N3Y3 721 aa24.65■■□□□ 1.54
SPHK1-202ENST00000392496 NUP62CLQ9H1M0 184 aa24.65■■□□□ 1.54
SPHK1-202ENST00000392496 DACT1Q9NYF0 836 aa24.65■■□□□ 1.54
SPHK1-202ENST00000392496 TAOK2Q9UL54 1235 aa24.65■■□□□ 1.54
SPHK1-202ENST00000392496 BTBD18B2RXH4 712 aa24.65■■□□□ 1.54
SPHK1-202ENST00000392496 SPTLC2O15270 562 aa24.65■■□□□ 1.54
SPHK1-202ENST00000392496 SF3A1Q15459 793 aaKnown RBP24.65■■□□□ 1.54
SPHK1-202ENST00000392496 DALRD3Q5D0E6 543 aaKnown RBP24.65■■□□□ 1.54
SPHK1-202ENST00000392496 ADALQ6DHV7 355 aa24.65■■□□□ 1.54
SPHK1-202ENST00000392496 RBSNQ9H1K0 784 aa24.65■■□□□ 1.54
SPHK1-202ENST00000392496 DHX36Q9H2U1 1008 aaKnown RBP24.65■■□□□ 1.54
SPHK1-202ENST00000392496 PCDHA7Q9UN72 937 aa24.65■■□□□ 1.54
SPHK1-202ENST00000392496 TOP1P11387 765 aaKnown RBP24.64■■□□□ 1.53
SPHK1-202ENST00000392496 RSBN1LQ6PCB5 846 aaPredicted RBP24.64■■□□□ 1.53
SPHK1-202ENST00000392496 CCAR1Q8IX12 1150 aaKnown RBP24.64■■□□□ 1.53
SPHK1-202ENST00000392496 PHF20Q9BVI0 1012 aa24.64■■□□□ 1.53
SPHK1-202ENST00000392496 ZNF277Q9NRM2 450 aaPredicted RBP24.64■■□□□ 1.53
SPHK1-202ENST00000392496 MAD2L2Q9UI95 211 aa24.64■■□□□ 1.53
SPHK1-202ENST00000392496 PCDHAC2Q9Y5I4 1007 aa24.64■■□□□ 1.53
SPHK1-202ENST00000392496 A0A1W2PQ27 194 aa24.63■■□□□ 1.53
SPHK1-202ENST00000392496 A0A1W2PQ64 194 aa24.63■■□□□ 1.53
SPHK1-202ENST00000392496 A0A1W2PQD8 194 aa24.63■■□□□ 1.53
SPHK1-202ENST00000392496 SLC39A14Q15043 492 aa24.63■■□□□ 1.53
SPHK1-202ENST00000392496 CEP95Q96GE4 821 aa24.63■■□□□ 1.53
SPHK1-202ENST00000392496 LZTS2Q9BRK4 669 aa24.63■■□□□ 1.53
SPHK1-202ENST00000392496 VIL1P09327 827 aaKnown RBP24.62■■□□□ 1.53
SPHK1-202ENST00000392496 PFKFB3Q16875 520 aaPredicted RBP24.62■■□□□ 1.53
SPHK1-202ENST00000392496 CLSTN2Q9H4D0 955 aa24.62■■□□□ 1.53
SPHK1-202ENST00000392496 VPS54Q9P1Q0 977 aa24.62■■□□□ 1.53
SPHK1-202ENST00000392496 FAM198AQ9UFP1 575 aa24.62■■□□□ 1.53
SPHK1-202ENST00000392496 IGKV6D-41A0A0C4DH26 115 aa24.62■■□□□ 1.53
SPHK1-202ENST00000392496 PALM3A6NDB9 673 aaPredicted RBP24.62■■□□□ 1.53
SPHK1-202ENST00000392496 NR1I2O75469 434 aa24.62■■□□□ 1.53
SPHK1-202ENST00000392496 SCG2P13521 617 aa24.62■■□□□ 1.53
SPHK1-202ENST00000392496 SHMT1P34896 483 aa24.62■■□□□ 1.53
SPHK1-202ENST00000392496 CFAP100Q494V2 611 aa24.62■■□□□ 1.53
SPHK1-202ENST00000392496 SHISA4Q96DD7 197 aa24.62■■□□□ 1.53
SPHK1-202ENST00000392496 PANK2Q9BZ23 570 aa24.62■■□□□ 1.53
SPHK1-202ENST00000392496 BRCA1P38398 1863 aaKnown RBP24.61■■□□□ 1.53
SPHK1-202ENST00000392496 COL4A5P29400 1685 aa24.61■■□□□ 1.53
SPHK1-202ENST00000392496 hCG_1642624A0A1W2PR95 340 aa24.61■■□□□ 1.53
SPHK1-202ENST00000392496 PPP6R2O75170 966 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms