RNA–Protein interactions for RNA: ENST00000390425.2

TRAV3-201, Transcript of T cell receptor alpha variable 3 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene TRAV3, Length 519 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3-201ENST00000390425 GREB1LQ9C091 1923 aaPredicted RBP13.42□□□□□ -0.26
TRAV3-201ENST00000390425 RPTORQ8N122 1335 aa13.41□□□□□ -0.26
TRAV3-201ENST00000390425 ZNFX1Q9P2E3 1918 aaKnown RBP13.41□□□□□ -0.26
TRAV3-201ENST00000390425 APBB1O00213 710 aa13.41□□□□□ -0.26
TRAV3-201ENST00000390425 GOLIM4O00461 696 aa13.41□□□□□ -0.26
TRAV3-201ENST00000390425 TFRCP02786 760 aaKnown RBP13.41□□□□□ -0.26
TRAV3-201ENST00000390425 TTC6Q86TZ1 520 aa13.41□□□□□ -0.26
TRAV3-201ENST00000390425 RPAP2Q8IXW5 612 aaPredicted RBP13.41□□□□□ -0.26
TRAV3-201ENST00000390425 LCORLQ8N3X6 602 aa13.41□□□□□ -0.26
TRAV3-201ENST00000390425 SOCS4Q8WXH5 440 aa13.41□□□□□ -0.26
TRAV3-201ENST00000390425 DNAJC2Q99543 621 aaKnown RBP13.41□□□□□ -0.26
TRAV3-201ENST00000390425 KIAA1683Q9H0B3 1180 aa13.41□□□□□ -0.26
TRAV3-201ENST00000390425 DDX19BQ9UMR2 479 aa13.41□□□□□ -0.26
TRAV3-201ENST00000390425 ZNF532Q9HCE3 1301 aa13.4□□□□□ -0.26
TRAV3-201ENST00000390425 MAGEB6P1A0A0J9YX57 407 aa13.4□□□□□ -0.26
TRAV3-201ENST00000390425 XRCC5P13010 732 aaKnown RBP13.4□□□□□ -0.26
TRAV3-201ENST00000390425 PRKAR2AP13861 404 aaKnown RBP13.4□□□□□ -0.26
TRAV3-201ENST00000390425 CAPN2P17655 700 aa13.4□□□□□ -0.26
TRAV3-201ENST00000390425 VCAM1P19320 739 aa13.4□□□□□ -0.26
TRAV3-201ENST00000390425 RAB3GAP1Q15042 981 aa13.4□□□□□ -0.26
TRAV3-201ENST00000390425 TTF1Q15361 905 aaPredicted RBP13.4□□□□□ -0.26
TRAV3-201ENST00000390425 CCL14Q16627 93 aa13.4□□□□□ -0.26
TRAV3-201ENST00000390425 ABCB5Q2M3G0 1257 aa13.4□□□□□ -0.26
TRAV3-201ENST00000390425 SLFNL1Q499Z3 407 aa13.4□□□□□ -0.26
TRAV3-201ENST00000390425 CERKLQ49MI3 558 aaPredicted RBP13.4□□□□□ -0.26
TRAV3-201ENST00000390425 MORN1Q5T089 497 aa13.4□□□□□ -0.26
TRAV3-201ENST00000390425 SLC9C2Q5TAH2 1124 aa13.4□□□□□ -0.26
TRAV3-201ENST00000390425 GPR142Q7Z601 462 aa13.4□□□□□ -0.26
TRAV3-201ENST00000390425 CLASRPQ8N2M8 674 aaKnown RBP13.4□□□□□ -0.26
TRAV3-201ENST00000390425 SDR42E1Q8WUS8 393 aa13.4□□□□□ -0.26
TRAV3-201ENST00000390425 FEZ1Q99689 392 aa13.4□□□□□ -0.26
TRAV3-201ENST00000390425 NUDT12Q9BQG2 462 aa13.4□□□□□ -0.26
TRAV3-201ENST00000390425 HMX1Q9NP08 348 aaPredicted RBP13.4□□□□□ -0.26
TRAV3-201ENST00000390425 USP17L15C9J2P7 530 aa13.39□□□□□ -0.27
TRAV3-201ENST00000390425 USP17L13C9JLJ4 530 aa13.39□□□□□ -0.27
TRAV3-201ENST00000390425 USP17L11C9JVI0 530 aa13.39□□□□□ -0.27
TRAV3-201ENST00000390425 USP17L18D6R9N7 530 aa13.39□□□□□ -0.27
TRAV3-201ENST00000390425 USP17L22D6RA61 530 aa13.39□□□□□ -0.27
TRAV3-201ENST00000390425 USP17L17D6RBQ6 530 aa13.39□□□□□ -0.27
TRAV3-201ENST00000390425 USP17L19D6RCP7 530 aa13.39□□□□□ -0.27
TRAV3-201ENST00000390425 USP17L20D6RJB6 530 aa13.39□□□□□ -0.27
TRAV3-201ENST00000390425 CHGBP05060 677 aa13.39□□□□□ -0.27
TRAV3-201ENST00000390425 CYP2D6P10635 497 aa13.39□□□□□ -0.27
TRAV3-201ENST00000390425 MS4A1P11836 297 aa13.39□□□□□ -0.27
TRAV3-201ENST00000390425 MAPK4P31152 587 aa13.39□□□□□ -0.27
TRAV3-201ENST00000390425 USP17L24Q0WX57 530 aa13.39□□□□□ -0.27
TRAV3-201ENST00000390425 CATSPERGQ6ZRH7 1159 aa13.39□□□□□ -0.27
TRAV3-201ENST00000390425 ANKLE1Q8NAG6 615 aa13.39□□□□□ -0.27
TRAV3-201ENST00000390425 SLC44A5Q8NCS7 719 aa13.39□□□□□ -0.27
TRAV3-201ENST00000390425 GTF3C2Q8WUA4 911 aaPredicted RBP13.39□□□□□ -0.27
TRAV3-201ENST00000390425 CRNKL1Q9BZJ0 848 aaKnown RBP13.39□□□□□ -0.27
TRAV3-201ENST00000390425 DCP1AQ9NPI6 582 aaPredicted RBP13.39□□□□□ -0.27
TRAV3-201ENST00000390425 OGDHLQ9ULD0 1010 aa13.39□□□□□ -0.27
TRAV3-201ENST00000390425 NR2E3Q9Y5X4 410 aa13.39□□□□□ -0.27
TRAV3-201ENST00000390425 A0A1W2PRG0 241 aa13.38□□□□□ -0.27
TRAV3-201ENST00000390425 SPDYE16A6NNV3 312 aaPredicted RBP13.38□□□□□ -0.27
TRAV3-201ENST00000390425 SMIM22K7EJ46 135 aa13.38□□□□□ -0.27
TRAV3-201ENST00000390425 EVI5O60447 810 aa13.38□□□□□ -0.27
TRAV3-201ENST00000390425 HMMRO75330 724 aa13.38□□□□□ -0.27
TRAV3-201ENST00000390425 POLR3DP05423 398 aaPredicted RBP13.38□□□□□ -0.27
TRAV3-201ENST00000390425 IFIT2P09913 472 aaKnown RBP13.38□□□□□ -0.27
TRAV3-201ENST00000390425 USP14P54578 494 aa13.38□□□□□ -0.27
TRAV3-201ENST00000390425 SEPT2Q15019 361 aa13.38□□□□□ -0.27
TRAV3-201ENST00000390425 LBX2Q6XYB7 198 aa13.38□□□□□ -0.27
TRAV3-201ENST00000390425 NECAB2Q7Z6G3 386 aa13.38□□□□□ -0.27
TRAV3-201ENST00000390425 PLEKHH3Q7Z736 793 aa13.38□□□□□ -0.27
TRAV3-201ENST00000390425 ARMT1Q9H993 441 aa13.38□□□□□ -0.27
TRAV3-201ENST00000390425 MCM9Q9NXL9 1143 aa13.38□□□□□ -0.27
TRAV3-201ENST00000390425 BTBD7Q9P203 1132 aa13.38□□□□□ -0.27
TRAV3-201ENST00000390425 RABGAP1Q9Y3P9 1069 aa13.38□□□□□ -0.27
TRAV3-201ENST00000390425 PLXNA1Q9UIW2 1896 aa13.38□□□□□ -0.27
TRAV3-201ENST00000390425 PFASO15067 1338 aa13.38□□□□□ -0.27
TRAV3-201ENST00000390425 PRKAB2O43741 272 aa13.37□□□□□ -0.27
TRAV3-201ENST00000390425 ZKSCAN1P17029 563 aaPredicted RBP13.37□□□□□ -0.27
TRAV3-201ENST00000390425 CCND3P30281 292 aaPredicted RBP13.37□□□□□ -0.27
TRAV3-201ENST00000390425 ADD2P35612 726 aa13.37□□□□□ -0.27
TRAV3-201ENST00000390425 RGS2P41220 211 aa13.37□□□□□ -0.27
TRAV3-201ENST00000390425 CACNB2Q08289 660 aaPredicted RBP13.37□□□□□ -0.27
TRAV3-201ENST00000390425 PDE3AQ14432 1141 aa13.37□□□□□ -0.27
TRAV3-201ENST00000390425 KIAA1755Q5JYT7 1200 aa13.37□□□□□ -0.27
TRAV3-201ENST00000390425 C20orf194Q5TEA3 1177 aa13.37□□□□□ -0.27
TRAV3-201ENST00000390425 CLEC10AQ8IUN9 316 aa13.37□□□□□ -0.27
TRAV3-201ENST00000390425 APBA2Q99767 749 aa13.37□□□□□ -0.27
TRAV3-201ENST00000390425 BCL11AQ9H165 835 aa13.37□□□□□ -0.27
TRAV3-201ENST00000390425 CABP5Q9NP86 173 aa13.37□□□□□ -0.27
TRAV3-201ENST00000390425 PAG1Q9NWQ8 432 aa13.37□□□□□ -0.27
TRAV3-201ENST00000390425 DNAH12Q6ZR08 3092 aa13.37□□□□□ -0.27
TRAV3-201ENST00000390425 RAB11FIP3O75154 756 aa13.36□□□□□ -0.27
TRAV3-201ENST00000390425 MBD4O95243 580 aa13.36□□□□□ -0.27
TRAV3-201ENST00000390425 ATP5JP18859 108 aa13.36□□□□□ -0.27
TRAV3-201ENST00000390425 MAP2K5Q13163 448 aa13.36□□□□□ -0.27
TRAV3-201ENST00000390425 DYNLL2Q96FJ2 89 aa13.36□□□□□ -0.27
TRAV3-201ENST00000390425 BOLA2Q9H3K6 86 aa13.36□□□□□ -0.27
TRAV3-201ENST00000390425 RPAP3Q9H6T3 665 aaPredicted RBP13.36□□□□□ -0.27
TRAV3-201ENST00000390425 FLRT1Q9NZU1 646 aa13.36□□□□□ -0.27
TRAV3-201ENST00000390425 RCAN3Q9UKA8 241 aa13.36□□□□□ -0.27
TRAV3-201ENST00000390425 MYH4Q9Y623 1939 aa13.36□□□□□ -0.27
TRAV3-201ENST00000390425 SMCHD1A6NHR9 2005 aa13.35□□□□□ -0.27
TRAV3-201ENST00000390425 CYP2D7A0A087X1C5 515 aa13.35□□□□□ -0.27
TRAV3-201ENST00000390425 COL6A1P12109 1028 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms