RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 RTN2O75298 545 aa21.31■■□□□ 1
SMARCD1-201ENST00000381513 NDUFA10O95299 355 aa21.31■■□□□ 1
SMARCD1-201ENST00000381513 ZBTB10Q96DT7 871 aa21.31■■□□□ 1
SMARCD1-201ENST00000381513 THOC1Q96FV9 657 aaKnown RBP21.31■■□□□ 1
SMARCD1-201ENST00000381513 SH3GL3Q99963 347 aa21.31■■□□□ 1
SMARCD1-201ENST00000381513 AGXT2Q9BYV1 514 aa21.31■■□□□ 1
SMARCD1-201ENST00000381513 AP1G2O75843 785 aa21.3■■□□□ 1
SMARCD1-201ENST00000381513 KRT40Q6A162 431 aa21.3■■□□□ 1
SMARCD1-201ENST00000381513 LRRC1Q9BTT6 524 aa21.3■■□□□ 1
SMARCD1-201ENST00000381513 ZBTB12Q9Y330 459 aaPredicted RBP21.3■■□□□ 1
SMARCD1-201ENST00000381513 PPP1R37O75864 691 aa21.3■■□□□ 1
SMARCD1-201ENST00000381513 SLC8A1P32418 973 aa21.3■■□□□ 1
SMARCD1-201ENST00000381513 PPARAQ07869 468 aa21.3■■□□□ 1
SMARCD1-201ENST00000381513 TRIM29Q14134 588 aa21.3■■□□□ 1
SMARCD1-201ENST00000381513 MORC3Q14149 939 aa21.3■■□□□ 1
SMARCD1-201ENST00000381513 PTPAQ15257 358 aa21.3■■□□□ 1
SMARCD1-201ENST00000381513 SPATA1Q5VX52 437 aa21.3■■□□□ 1
SMARCD1-201ENST00000381513 YTHDF3Q7Z739 585 aaKnown RBP21.3■■□□□ 1
SMARCD1-201ENST00000381513 MYCBPAPQ8TBZ2 947 aa21.3■■□□□ 1
SMARCD1-201ENST00000381513 PSMB7Q99436 277 aa21.3■■□□□ 1
SMARCD1-201ENST00000381513 HAUS4Q9H6D7 363 aa21.3■■□□□ 1
SMARCD1-201ENST00000381513 MACROD2A1Z1Q3 448 aa21.29■■□□□ 1
SMARCD1-201ENST00000381513 RNF225M0QZC1 329 aaPredicted RBP21.29■■□□□ 1
SMARCD1-201ENST00000381513 GRM8O00222 908 aa21.29■■□□□ 1
SMARCD1-201ENST00000381513 ATP5JP18859 108 aa21.29■■□□□ 1
SMARCD1-201ENST00000381513 INHBEP58166 350 aa21.29■■□□□ 1
SMARCD1-201ENST00000381513 DBNDD2Q9BQY9 259 aa21.29■■□□□ 1
SMARCD1-201ENST00000381513 ANKRD18BA2A2Z9 1011 aa21.29■■□□□ 1
SMARCD1-201ENST00000381513 OPLAHO14841 1288 aa21.29■■□□□ 1
SMARCD1-201ENST00000381513 PRC1O43663 620 aa21.29■■□□□ 1
SMARCD1-201ENST00000381513 BUB1BO60566 1050 aaPredicted RBP21.29■■□□□ 1
SMARCD1-201ENST00000381513 CFAP58Q5T655 872 aa21.29■■□□□ 1
SMARCD1-201ENST00000381513 PSMD14O00487 310 aa21.29■■□□□ 1
SMARCD1-201ENST00000381513 FAM228AQ86W67 206 aa21.29■■□□□ 1
SMARCD1-201ENST00000381513 PARD3BQ8TEW8 1205 aa21.29■■□□□ 1
SMARCD1-201ENST00000381513 ZIM3Q96PE6 472 aa21.29■■□□□ 1
SMARCD1-201ENST00000381513 CRYBG1Q9Y4K1 1723 aa21.28■■□□□ 1
SMARCD1-201ENST00000381513 KCNQ3O43525 872 aa21.28■■□□□ 1
SMARCD1-201ENST00000381513 IPO7O95373 1038 aaKnown RBP21.28■■□□□ 1
SMARCD1-201ENST00000381513 GRIN1Q05586 938 aa21.28■■□□□ 1
SMARCD1-201ENST00000381513 PTGISQ16647 500 aa21.28■■□□□ 1
SMARCD1-201ENST00000381513 MICAL1Q8TDZ2 1067 aa21.28■■□□□ 1
SMARCD1-201ENST00000381513 ATP6V0A4Q9HBG4 840 aa21.28■■□□□ 1
SMARCD1-201ENST00000381513 HSPD1P10809 573 aaKnown RBP21.28■■□□□ 1
SMARCD1-201ENST00000381513 NR1D1P20393 614 aa21.28■■□□□ 1
SMARCD1-201ENST00000381513 CASP1P29466 404 aa21.28■■□□□ 1
SMARCD1-201ENST00000381513 PLCB4Q15147 1175 aa21.28■■□□□ 1
SMARCD1-201ENST00000381513 NEUROD6Q96NK8 337 aa21.28■■□□□ 1
SMARCD1-201ENST00000381513 IRAK4Q9NWZ3 460 aa21.28■■□□□ 1
SMARCD1-201ENST00000381513 TAB2Q9NYJ8 693 aa21.28■■□□□ 1
SMARCD1-201ENST00000381513 TFCP2Q12800 502 aa21.27■■□□□ 1
SMARCD1-201ENST00000381513 MYO1EQ12965 1108 aa21.27■■□□□ 1
SMARCD1-201ENST00000381513 GRIK3Q13003 919 aa21.27■■□□□ 1
SMARCD1-201ENST00000381513 ACCSLQ4AC99 568 aa21.27■■□□□ 1
SMARCD1-201ENST00000381513 PHKBQ93100 1093 aa21.27■■□□□ 1
SMARCD1-201ENST00000381513 SBNO1A3KN83 1393 aa21.27■■□□□ 1
SMARCD1-201ENST00000381513 ERCC5P28715 1186 aaPredicted RBP21.27■■□□□ 1
SMARCD1-201ENST00000381513 MDM2Q00987 491 aaPredicted RBP21.27■■□□□ 1
SMARCD1-201ENST00000381513 RALYLQ86SE5 291 aaKnown RBP21.27■■□□□ 1
SMARCD1-201ENST00000381513 SAAL1Q96ER3 474 aa21.27■■□□□ 1
SMARCD1-201ENST00000381513 CCDC43Q96MW1 224 aaKnown RBP21.27■■□□□ 1
SMARCD1-201ENST00000381513 ALS2CLQ60I27 953 aa21.27■□□□□ 0.99
SMARCD1-201ENST00000381513 KRT86O43790 486 aa21.26■□□□□ 0.99
SMARCD1-201ENST00000381513 CDC25CP30307 473 aa21.26■□□□□ 0.99
SMARCD1-201ENST00000381513 KCNB1Q14721 858 aa21.26■□□□□ 0.99
SMARCD1-201ENST00000381513 MSL1Q68DK7 614 aa21.26■□□□□ 0.99
SMARCD1-201ENST00000381513 ACTR5Q9H9F9 607 aaPredicted RBP21.26■□□□□ 0.99
SMARCD1-201ENST00000381513 ETAA1Q9NY74 926 aa21.26■□□□□ 0.99
SMARCD1-201ENST00000381513 BACH1O14867 736 aa21.26■□□□□ 0.99
SMARCD1-201ENST00000381513 EPHB4P54760 987 aa21.26■□□□□ 0.99
SMARCD1-201ENST00000381513 APTXQ7Z2E3 356 aaKnown RBP21.26■□□□□ 0.99
SMARCD1-201ENST00000381513 RBBP5Q15291 538 aaKnown RBP21.25■□□□□ 0.99
SMARCD1-201ENST00000381513 CCDC181Q5TID7 509 aa21.25■□□□□ 0.99
SMARCD1-201ENST00000381513 SEC31BQ9NQW1 1179 aa21.25■□□□□ 0.99
SMARCD1-201ENST00000381513 REXO2Q9Y3B8 237 aaKnown RBP21.25■□□□□ 0.99
SMARCD1-201ENST00000381513 ADCY2Q08462 1091 aa21.25■□□□□ 0.99
SMARCD1-201ENST00000381513 TNNI3KQ59H18 835 aa21.25■□□□□ 0.99
SMARCD1-201ENST00000381513 PAPD7Q5XG87 772 aaKnown RBP21.25■□□□□ 0.99
SMARCD1-201ENST00000381513 LMBR1Q8WVP7 490 aa21.25■□□□□ 0.99
SMARCD1-201ENST00000381513 FPGT-TNNI3KV9GXZ4 949 aa21.25■□□□□ 0.99
SMARCD1-201ENST00000381513 PBX1P40424 430 aa21.25■□□□□ 0.99
SMARCD1-201ENST00000381513 MAATS1Q7Z4T9 603 aa21.25■□□□□ 0.99
SMARCD1-201ENST00000381513 KBTBD3Q8NAB2 608 aa21.25■□□□□ 0.99
SMARCD1-201ENST00000381513 NSMCE1Q8WV22 266 aa21.25■□□□□ 0.99
SMARCD1-201ENST00000381513 IFT81Q8WYA0 676 aa21.25■□□□□ 0.99
SMARCD1-201ENST00000381513 SF3A3Q12874 501 aaKnown RBP eCLIP21.24■□□□□ 0.996e-7■■■■□ 20.6
SMARCD1-201ENST00000381513 KAZALD1Q96I82 304 aa21.24■□□□□ 0.99
SMARCD1-201ENST00000381513 DSCC1Q9BVC3 393 aa21.24■□□□□ 0.99
SMARCD1-201ENST00000381513 FAM107AO95990 144 aa21.24■□□□□ 0.99
SMARCD1-201ENST00000381513 TRIML1Q8N9V2 468 aa21.24■□□□□ 0.99
SMARCD1-201ENST00000381513 RASSF8Q8NHQ8 419 aa21.24■□□□□ 0.99
SMARCD1-201ENST00000381513 CYFIP2Q96F07 1278 aa21.24■□□□□ 0.99
SMARCD1-201ENST00000381513 DNM1LO00429 736 aa21.23■□□□□ 0.99
SMARCD1-201ENST00000381513 EIF4A1P60842 406 aaKnown RBP21.23■□□□□ 0.99
SMARCD1-201ENST00000381513 PROSER3Q2NL68 480 aa21.23■□□□□ 0.99
SMARCD1-201ENST00000381513 KSR2Q6VAB6 950 aa21.23■□□□□ 0.99
SMARCD1-201ENST00000381513 EHBP1Q8NDI1 1231 aa21.23■□□□□ 0.99
SMARCD1-201ENST00000381513 MAP3K14Q99558 947 aa21.23■□□□□ 0.99
SMARCD1-201ENST00000381513 SMARCAL1Q9NZC9 954 aa21.23■□□□□ 0.99
SMARCD1-201ENST00000381513 CTNND2Q9UQB3 1225 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms