RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 CALM3P0DP25 149 aa17.09■□□□□ 0.33
PRNP-201ENST00000379440 GSTO1P78417 241 aa17.09■□□□□ 0.33
PRNP-201ENST00000379440 TFAP4Q01664 338 aa17.09■□□□□ 0.33
PRNP-201ENST00000379440 GRIN1Q05586 938 aa17.09■□□□□ 0.33
PRNP-201ENST00000379440 RCSD1Q6JBY9 416 aa17.09■□□□□ 0.33
PRNP-201ENST00000379440 TMTC3Q6ZXV5 915 aa17.09■□□□□ 0.33
PRNP-201ENST00000379440 PLA2G4DQ86XP0 818 aa17.09■□□□□ 0.33
PRNP-201ENST00000379440 MAPKAPK5Q8IW41 473 aa17.09■□□□□ 0.33
PRNP-201ENST00000379440 C6orf229H3BNL8 230 aa17.09■□□□□ 0.33
PRNP-201ENST00000379440 IL1R1P14778 569 aa17.09■□□□□ 0.33
PRNP-201ENST00000379440 HOXA10P31260 410 aaPredicted RBP17.09■□□□□ 0.33
PRNP-201ENST00000379440 DPCR1Q3MIW9 517 aa17.09■□□□□ 0.33
PRNP-201ENST00000379440 RESP18Q5W5W9 173 aa17.09■□□□□ 0.33
PRNP-201ENST00000379440 C17orf53Q8N3J3 647 aaPredicted RBP17.09■□□□□ 0.33
PRNP-201ENST00000379440 PIBF1Q8WXW3 757 aa17.09■□□□□ 0.33
PRNP-201ENST00000379440 RTFDC1Q9BY42 306 aaPredicted RBP17.09■□□□□ 0.33
PRNP-201ENST00000379440 KCNF1Q9H3M0 494 aa17.09■□□□□ 0.33
PRNP-201ENST00000379440 SAP30BPQ9UHR5 308 aaKnown RBP17.09■□□□□ 0.33
PRNP-201ENST00000379440 BECN2A8MW95 431 aa17.08■□□□□ 0.33
PRNP-201ENST00000379440 CUTAO60888 179 aa17.08■□□□□ 0.33
PRNP-201ENST00000379440 PLCD1P51178 756 aa17.08■□□□□ 0.33
PRNP-201ENST00000379440 PPP4CP60510 307 aa17.08■□□□□ 0.33
PRNP-201ENST00000379440 KIAA2012Q0VF49 1180 aa17.08■□□□□ 0.33
PRNP-201ENST00000379440 ZNF827Q17R98 1081 aa17.08■□□□□ 0.33
PRNP-201ENST00000379440 RILPL1Q5EBL4 403 aa17.08■□□□□ 0.33
PRNP-201ENST00000379440 EARS2Q5JPH6 523 aaKnown RBP17.08■□□□□ 0.33
PRNP-201ENST00000379440 ISM2Q6H9L7 571 aa17.08■□□□□ 0.33
PRNP-201ENST00000379440 CTCFLQ8NI51 663 aaPredicted RBP17.08■□□□□ 0.33
PRNP-201ENST00000379440 IL17RBQ9NRM6 502 aa17.08■□□□□ 0.33
PRNP-201ENST00000379440 MYH6P13533 1939 aa17.08■□□□□ 0.33
PRNP-201ENST00000379440 CEP57L1Q8IYX8 460 aa17.08■□□□□ 0.32
PRNP-201ENST00000379440 KRI1Q8N9T8 703 aaKnown RBP17.08■□□□□ 0.32
PRNP-201ENST00000379440 SLC44A5Q8NCS7 719 aa17.08■□□□□ 0.32
PRNP-201ENST00000379440 PHF20Q9BVI0 1012 aa17.08■□□□□ 0.32
PRNP-201ENST00000379440 NRBP1Q9UHY1 535 aa17.08■□□□□ 0.32
PRNP-201ENST00000379440 DLEC1Q9Y238 1755 aa17.08■□□□□ 0.32
PRNP-201ENST00000379440 BTDP43251 543 aa17.07■□□□□ 0.32
PRNP-201ENST00000379440 DRC7Q8IY82 874 aa17.07■□□□□ 0.32
PRNP-201ENST00000379440 AOPEPQ8N6M6 819 aa17.07■□□□□ 0.32
PRNP-201ENST00000379440 NOL10Q9BSC4 688 aaKnown RBP17.07■□□□□ 0.32
PRNP-201ENST00000379440 CNTNAP5Q8WYK1 1306 aa17.07■□□□□ 0.32
PRNP-201ENST00000379440 LDHCP07864 332 aa17.07■□□□□ 0.32
PRNP-201ENST00000379440 XBP1P17861 261 aa17.07■□□□□ 0.32
PRNP-201ENST00000379440 CRAMP1Q96RY5 1269 aa17.07■□□□□ 0.32
PRNP-201ENST00000379440 MKNK2Q9HBH9 465 aa17.07■□□□□ 0.32
PRNP-201ENST00000379440 KLRG2A4D1S0 409 aaPredicted RBP17.06■□□□□ 0.32
PRNP-201ENST00000379440 USP17L3A6NCW0 530 aa17.06■□□□□ 0.32
PRNP-201ENST00000379440 USP17L4A6NCW7 530 aa17.06■□□□□ 0.32
PRNP-201ENST00000379440 RIMBP2O15034 1052 aa17.06■□□□□ 0.32
PRNP-201ENST00000379440 VEGFAP15692 232 aaPredicted RBP17.06■□□□□ 0.32
PRNP-201ENST00000379440 PTGS1P23219 599 aa17.06■□□□□ 0.32
PRNP-201ENST00000379440 MFSD14BQ5SR56 506 aa17.06■□□□□ 0.32
PRNP-201ENST00000379440 OLFM4Q6UX06 510 aa17.06■□□□□ 0.32
PRNP-201ENST00000379440 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.06■□□□□ 0.32
PRNP-201ENST00000379440 USP17L1Q7RTZ2 530 aa17.06■□□□□ 0.32
PRNP-201ENST00000379440 BAZ2BQ9UIF8 2168 aaKnown RBP17.06■□□□□ 0.32
PRNP-201ENST00000379440 FAM237AA0A1B0GTK4 181 aa17.06■□□□□ 0.32
PRNP-201ENST00000379440 ZRSR1Q15695 479 aaKnown RBP17.06■□□□□ 0.32
PRNP-201ENST00000379440 LONRF3Q496Y0 759 aa17.06■□□□□ 0.32
PRNP-201ENST00000379440 NOM1Q5C9Z4 860 aaKnown RBP17.06■□□□□ 0.32
PRNP-201ENST00000379440 TIGD1Q96MW7 591 aa17.06■□□□□ 0.32
PRNP-201ENST00000379440 FBXO2Q9UK22 296 aaPredicted RBP17.06■□□□□ 0.32
PRNP-201ENST00000379440 KCNH3Q9ULD8 1083 aa17.06■□□□□ 0.32
PRNP-201ENST00000379440 GOLGA6L6A8MZA4 724 aa17.05■□□□□ 0.32
PRNP-201ENST00000379440 KRT2P35908 639 aa17.05■□□□□ 0.32
PRNP-201ENST00000379440 CCDC186Q7Z3E2 898 aa17.05■□□□□ 0.32
PRNP-201ENST00000379440 COL23A1Q86Y22 540 aaPredicted RBP17.05■□□□□ 0.32
PRNP-201ENST00000379440 PPEF1O14829 653 aaPredicted RBP17.05■□□□□ 0.32
PRNP-201ENST00000379440 PTPREP23469 700 aa17.05■□□□□ 0.32
PRNP-201ENST00000379440 PNOCQ13519 176 aa17.05■□□□□ 0.32
PRNP-201ENST00000379440 NAT10Q9H0A0 1025 aaKnown RBP17.05■□□□□ 0.32
PRNP-201ENST00000379440 KAT14Q9H8E8 782 aa17.05■□□□□ 0.32
PRNP-201ENST00000379440 GPR75-ASB3A0A0A6YYF3 556 aa17.04■□□□□ 0.32
PRNP-201ENST00000379440 NPY5RQ15761 445 aa17.04■□□□□ 0.32
PRNP-201ENST00000379440 TAF3Q5VWG9 929 aa17.04■□□□□ 0.32
PRNP-201ENST00000379440 PYCARDQ9ULZ3 195 aa17.04■□□□□ 0.32
PRNP-201ENST00000379440 WNT7AO00755 349 aa17.04■□□□□ 0.32
PRNP-201ENST00000379440 IGSF3O75054 1194 aa17.04■□□□□ 0.32
PRNP-201ENST00000379440 ZSCAN20P17040 1043 aaPredicted RBP17.04■□□□□ 0.32
PRNP-201ENST00000379440 NLRP12P59046 1061 aa17.04■□□□□ 0.32
PRNP-201ENST00000379440 RBM6P78332 1123 aaKnown RBP17.04■□□□□ 0.32
PRNP-201ENST00000379440 AMOTL1Q8IY63 956 aa17.04■□□□□ 0.32
PRNP-201ENST00000379440 MTMR7Q9Y216 660 aa17.04■□□□□ 0.32
PRNP-201ENST00000379440 FOXN1O15353 648 aa17.04■□□□□ 0.32
PRNP-201ENST00000379440 TSPY3P0CV98 308 aa17.04■□□□□ 0.32
PRNP-201ENST00000379440 TSPY8P0CW00 308 aa17.04■□□□□ 0.32
PRNP-201ENST00000379440 GTF2IP78347 998 aa17.04■□□□□ 0.32
PRNP-201ENST00000379440 SARM1Q6SZW1 724 aa17.04■□□□□ 0.32
PRNP-201ENST00000379440 METTL16Q86W50 562 aaKnown RBP17.04■□□□□ 0.32
PRNP-201ENST00000379440 TEX11Q8IYF3 940 aa17.04■□□□□ 0.32
PRNP-201ENST00000379440 STAG2Q8N3U4 1231 aa17.04■□□□□ 0.32
PRNP-201ENST00000379440 PNMA1Q8ND90 353 aa17.04■□□□□ 0.32
PRNP-201ENST00000379440 GTPBP4Q9BZE4 634 aaKnown RBP17.04■□□□□ 0.32
PRNP-201ENST00000379440 CLIP2Q9UDT6 1046 aa17.04■□□□□ 0.32
PRNP-201ENST00000379440 ADAMTS3O15072 1205 aa17.03■□□□□ 0.32
PRNP-201ENST00000379440 NOLC1Q14978 699 aaKnown RBP eCLIP17.03■□□□□ 0.325e-10■■■□□ 17
PRNP-201ENST00000379440 KRBA2Q6ZNG9 492 aa17.03■□□□□ 0.32
PRNP-201ENST00000379440 DGKHQ86XP1 1220 aa17.03■□□□□ 0.32
PRNP-201ENST00000379440 FOXP4Q8IVH2 680 aaPredicted RBP17.03■□□□□ 0.32
PRNP-201ENST00000379440 SP8Q8IXZ3 490 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms