RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 IGF2BP3O00425 579 aaKnown RBP eCLIP15.7■□□□□ 0.1
CKAP2-202ENST00000378034 PTH1RQ03431 593 aa15.7■□□□□ 0.1
CKAP2-202ENST00000378034 MOGSQ13724 837 aa15.7■□□□□ 0.1
CKAP2-202ENST00000378034 MFSD6Q6ZSS7 791 aa15.7■□□□□ 0.1
CKAP2-202ENST00000378034 ANKRD23Q86SG2 305 aa15.7■□□□□ 0.1
CKAP2-202ENST00000378034 PLIN4Q96Q06 1357 aa15.7■□□□□ 0.1
CKAP2-202ENST00000378034 PRDM1O75626 825 aa15.69■□□□□ 0.1
CKAP2-202ENST00000378034 HSPA1AP0DMV8 641 aaKnown RBP15.69■□□□□ 0.1
CKAP2-202ENST00000378034 HSPA1BP0DMV9 641 aaKnown RBP15.69■□□□□ 0.1
CKAP2-202ENST00000378034 USP14P54578 494 aa15.69■□□□□ 0.1
CKAP2-202ENST00000378034 HAND2P61296 217 aa15.69■□□□□ 0.1
CKAP2-202ENST00000378034 PPP4R3BQ5MIZ7 849 aa15.69■□□□□ 0.1
CKAP2-202ENST00000378034 NEDD1Q8NHV4 660 aa15.69■□□□□ 0.1
CKAP2-202ENST00000378034 LSG1Q9H089 658 aaKnown RBP15.69■□□□□ 0.1
CKAP2-202ENST00000378034 KIAA1683Q9H0B3 1180 aa15.69■□□□□ 0.1
CKAP2-202ENST00000378034 SH2D4AQ9H788 454 aa15.69■□□□□ 0.1
CKAP2-202ENST00000378034 ARHGEF10LQ9HCE6 1279 aa15.69■□□□□ 0.1
CKAP2-202ENST00000378034 SLC45A1Q9Y2W3 748 aa15.69■□□□□ 0.1
CKAP2-202ENST00000378034 LOC285556D6RIA3 1793 aa15.69■□□□□ 0.1
CKAP2-202ENST00000378034 TSPY3P0CV98 308 aa15.69■□□□□ 0.1
CKAP2-202ENST00000378034 TSPY8P0CW00 308 aa15.69■□□□□ 0.1
CKAP2-202ENST00000378034 ICA1Q05084 483 aa15.69■□□□□ 0.1
CKAP2-202ENST00000378034 USP17L2Q6R6M4 530 aa15.69■□□□□ 0.1
CKAP2-202ENST00000378034 NBPF3Q9H094 633 aa15.69■□□□□ 0.1
CKAP2-202ENST00000378034 TMOD4Q9NZQ9 345 aa15.69■□□□□ 0.1
CKAP2-202ENST00000378034 BTBD19C9JJ37 291 aa15.68■□□□□ 0.1
CKAP2-202ENST00000378034 TFAP4Q01664 338 aa15.68■□□□□ 0.1
CKAP2-202ENST00000378034 MTMR2Q13614 643 aa15.68■□□□□ 0.1
CKAP2-202ENST00000378034 GADL1Q6ZQY3 521 aa15.68■□□□□ 0.1
CKAP2-202ENST00000378034 FEZ1Q99689 392 aa15.68■□□□□ 0.1
CKAP2-202ENST00000378034 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.68■□□□□ 0.1
CKAP2-202ENST00000378034 ANO2Q9NQ90 1003 aa15.68■□□□□ 0.1
CKAP2-202ENST00000378034 IGKV6D-41A0A0C4DH26 115 aa15.67■□□□□ 0.1
CKAP2-202ENST00000378034 TSPY2A6NKD2 308 aa15.67■□□□□ 0.1
CKAP2-202ENST00000378034 TRPA1O75762 1119 aa15.67■□□□□ 0.1
CKAP2-202ENST00000378034 HMGCS2P54868 508 aa15.67■□□□□ 0.1
CKAP2-202ENST00000378034 PABPC4Q13310 644 aaKnown RBP eCLIP15.67■□□□□ 0.1
CKAP2-202ENST00000378034 GPAT2Q6NUI2 795 aa15.67■□□□□ 0.1
CKAP2-202ENST00000378034 TBC1D10CQ8IV04 446 aa15.67■□□□□ 0.1
CKAP2-202ENST00000378034 FAM43AQ8N2R8 423 aa15.67■□□□□ 0.1
CKAP2-202ENST00000378034 C12orf42Q96LP6 360 aa15.67■□□□□ 0.1
CKAP2-202ENST00000378034 CNNM2Q9H8M5 875 aa15.67■□□□□ 0.1
CKAP2-202ENST00000378034 NYAP2Q9P242 653 aa15.67■□□□□ 0.1
CKAP2-202ENST00000378034 AGTPBP1Q9UPW5 1226 aa15.67■□□□□ 0.1
CKAP2-202ENST00000378034 RANBP6O60518 1105 aaKnown RBP15.67■□□□□ 0.1
CKAP2-202ENST00000378034 CTCFP49711 727 aaPredicted RBP15.67■□□□□ 0.1
CKAP2-202ENST00000378034 ACER1Q8TDN7 264 aa15.67■□□□□ 0.1
CKAP2-202ENST00000378034 INCENPQ9NQS7 918 aa15.67■□□□□ 0.1
CKAP2-202ENST00000378034 TOMM22Q9NS69 142 aa15.67■□□□□ 0.1
CKAP2-202ENST00000378034 SYNPO2Q9UMS6 1093 aa15.67■□□□□ 0.1
CKAP2-202ENST00000378034 TMX2Q9Y320 296 aa15.67■□□□□ 0.1
CKAP2-202ENST00000378034 RBM8AQ9Y5S9 174 aaKnown RBP15.67■□□□□ 0.1
CKAP2-202ENST00000378034 TACC3Q9Y6A5 838 aa15.67■□□□□ 0.1
CKAP2-202ENST00000378034 PDHXO00330 501 aa15.66■□□□□ 0.1
CKAP2-202ENST00000378034 NOM1Q5C9Z4 860 aaKnown RBP15.66■□□□□ 0.1
CKAP2-202ENST00000378034 SIAH1Q8IUQ4 282 aa15.66■□□□□ 0.1
CKAP2-202ENST00000378034 ESR2Q92731 530 aa15.66■□□□□ 0.1
CKAP2-202ENST00000378034 KRT23Q9C075 422 aa15.66■□□□□ 0.1
CKAP2-202ENST00000378034 FOXN1O15353 648 aa15.66■□□□□ 0.1
CKAP2-202ENST00000378034 CYP21A2P08686 494 aa15.66■□□□□ 0.1
CKAP2-202ENST00000378034 EEF2P13639 858 aaKnown RBP15.66■□□□□ 0.1
CKAP2-202ENST00000378034 TAF1CQ15572 869 aaPredicted RBP15.66■□□□□ 0.1
CKAP2-202ENST00000378034 FAM47AQ5JRC9 791 aa15.66■□□□□ 0.1
CKAP2-202ENST00000378034 POTEDQ86YR6 584 aa15.66■□□□□ 0.1
CKAP2-202ENST00000378034 MKL1Q969V6 931 aa15.66■□□□□ 0.1
CKAP2-202ENST00000378034 ZFYVE28Q9HCC9 887 aa15.66■□□□□ 0.1
CKAP2-202ENST00000378034 EMILIN3Q9NT22 766 aa15.66■□□□□ 0.1
CKAP2-202ENST00000378034 TCP11L1Q9NUJ3 509 aa15.66■□□□□ 0.1
CKAP2-202ENST00000378034 MTMR4Q9NYA4 1195 aa15.66■□□□□ 0.1
CKAP2-202ENST00000378034 A0A1W2PRG0 241 aa15.65■□□□□ 0.1
CKAP2-202ENST00000378034 EPB41L2O43491 1005 aaKnown RBP15.65■□□□□ 0.1
CKAP2-202ENST00000378034 REC8O95072 547 aa15.65■□□□□ 0.1
CKAP2-202ENST00000378034 TTLL1O95922 423 aa15.65■□□□□ 0.1
CKAP2-202ENST00000378034 RRP12Q5JTH9 1297 aaKnown RBP15.65■□□□□ 0.1
CKAP2-202ENST00000378034 LPAR1Q92633 364 aa15.65■□□□□ 0.1
CKAP2-202ENST00000378034 CEP95Q96GE4 821 aa15.65■□□□□ 0.1
CKAP2-202ENST00000378034 PNMA3Q9UL41 463 aa15.65■□□□□ 0.1
CKAP2-202ENST00000378034 GTF3C3Q9Y5Q9 886 aa15.65■□□□□ 0.1
CKAP2-202ENST00000378034 EIF5BO60841 1220 aaKnown RBP15.64■□□□□ 0.09
CKAP2-202ENST00000378034 HOXA7P31268 230 aaPredicted RBP15.64■□□□□ 0.09
CKAP2-202ENST00000378034 NECTIN1Q15223 517 aa15.64■□□□□ 0.09
CKAP2-202ENST00000378034 PARK7Q99497 189 aaKnown RBP15.64■□□□□ 0.09
CKAP2-202ENST00000378034 NEDD4P46934 1319 aa15.64■□□□□ 0.09
CKAP2-202ENST00000378034 HSPA8P11142 646 aaKnown RBP15.64■□□□□ 0.09
CKAP2-202ENST00000378034 OSBPP22059 807 aa15.64■□□□□ 0.09
CKAP2-202ENST00000378034 NOVP48745 357 aa15.64■□□□□ 0.09
CKAP2-202ENST00000378034 ATP2B2Q01814 1243 aa15.64■□□□□ 0.09
CKAP2-202ENST00000378034 TRDNQ13061 729 aa15.64■□□□□ 0.09
CKAP2-202ENST00000378034 CRHR2Q13324 411 aa15.64■□□□□ 0.09
CKAP2-202ENST00000378034 CCDC178Q5BJE1 867 aa15.64■□□□□ 0.09
CKAP2-202ENST00000378034 TREML2Q5T2D2 321 aa15.64■□□□□ 0.09
CKAP2-202ENST00000378034 RNF20Q5VTR2 975 aa15.64■□□□□ 0.09
CKAP2-202ENST00000378034 CLEC10AQ8IUN9 316 aa15.64■□□□□ 0.09
CKAP2-202ENST00000378034 VCPKMTQ9H867 229 aa15.64■□□□□ 0.09
CKAP2-202ENST00000378034 GOPCQ9HD26 462 aa15.64■□□□□ 0.09
CKAP2-202ENST00000378034 MYH4Q9Y623 1939 aa15.63■□□□□ 0.09
CKAP2-202ENST00000378034 TBC1D8O95759 1140 aa15.63■□□□□ 0.09
CKAP2-202ENST00000378034 ZYXQ15942 572 aaKnown RBP15.63■□□□□ 0.09
CKAP2-202ENST00000378034 IL17RBQ9NRM6 502 aa15.63■□□□□ 0.09
CKAP2-202ENST00000378034 CLIP2Q9UDT6 1046 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms