RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 H0YHG0 523 aa17.66■□□□□ 0.42
CSNK1A1-202ENST00000377843 IBSPP21815 317 aaPredicted RBP17.66■□□□□ 0.42
CSNK1A1-202ENST00000377843 MCM3P25205 808 aa17.66■□□□□ 0.42
CSNK1A1-202ENST00000377843 ZC3H6P61129 1189 aaKnown RBP17.66■□□□□ 0.42
CSNK1A1-202ENST00000377843 TIMM10P62072 90 aa17.66■□□□□ 0.42
CSNK1A1-202ENST00000377843 DPYDQ12882 1025 aa17.66■□□□□ 0.42
CSNK1A1-202ENST00000377843 ANKRD18AQ8IVF6 992 aa17.66■□□□□ 0.42
CSNK1A1-202ENST00000377843 GIMAP7Q8NHV1 300 aa17.66■□□□□ 0.42
CSNK1A1-202ENST00000377843 HDAC7Q8WUI4 952 aa17.66■□□□□ 0.42
CSNK1A1-202ENST00000377843 LRRC59Q96AG4 307 aaKnown RBP17.66■□□□□ 0.42
CSNK1A1-202ENST00000377843 NEUROD6Q96NK8 337 aa17.66■□□□□ 0.42
CSNK1A1-202ENST00000377843 MYD88Q99836 296 aa17.66■□□□□ 0.42
CSNK1A1-202ENST00000377843 SAR1BQ9Y6B6 198 aa17.66■□□□□ 0.42
CSNK1A1-202ENST00000377843 HEG1Q9ULI3 1381 aa17.66■□□□□ 0.42
CSNK1A1-202ENST00000377843 SYNRGQ9UMZ2 1314 aa17.66■□□□□ 0.42
CSNK1A1-202ENST00000377843 NDUFAB1O14561 156 aa17.66■□□□□ 0.42
CSNK1A1-202ENST00000377843 RNF113AO15541 343 aaKnown RBP17.66■□□□□ 0.42
CSNK1A1-202ENST00000377843 MRPS25P82663 173 aaKnown RBP17.66■□□□□ 0.42
CSNK1A1-202ENST00000377843 C2orf54Q08AI8 447 aa17.66■□□□□ 0.42
CSNK1A1-202ENST00000377843 CYP26C1Q6V0L0 522 aa17.66■□□□□ 0.42
CSNK1A1-202ENST00000377843 SND1Q7KZF4 910 aaKnown RBP eCLIP17.66■□□□□ 0.42
CSNK1A1-202ENST00000377843 OTUD6BQ8N6M0 293 aa17.66■□□□□ 0.42
CSNK1A1-202ENST00000377843 CCDC51Q96ER9 411 aa17.66■□□□□ 0.42
CSNK1A1-202ENST00000377843 STRCP1A6NGW2 1772 aa17.66■□□□□ 0.42
CSNK1A1-202ENST00000377843 MEFVO15553 781 aaPredicted RBP17.65■□□□□ 0.42
CSNK1A1-202ENST00000377843 ECM2O94769 699 aaPredicted RBP17.65■□□□□ 0.42
CSNK1A1-202ENST00000377843 FGAP02671 866 aa17.65■□□□□ 0.42
CSNK1A1-202ENST00000377843 HSP90AB3PQ58FF7 597 aa17.65■□□□□ 0.42
CSNK1A1-202ENST00000377843 TRIML1Q8N9V2 468 aa17.65■□□□□ 0.42
CSNK1A1-202ENST00000377843 FAXDC2Q96IV6 333 aa17.65■□□□□ 0.42
CSNK1A1-202ENST00000377843 NWD2Q9ULI1 1742 aa17.65■□□□□ 0.42
CSNK1A1-202ENST00000377843 C4AP0C0L4 1744 aa17.65■□□□□ 0.42
CSNK1A1-202ENST00000377843 C4BP0C0L5 1744 aa17.65■□□□□ 0.42
CSNK1A1-202ENST00000377843 SETQ01105 290 aaPredicted RBP17.65■□□□□ 0.42
CSNK1A1-202ENST00000377843 NEDD9Q14511 834 aa17.65■□□□□ 0.42
CSNK1A1-202ENST00000377843 PPP2R5AQ15172 486 aa17.65■□□□□ 0.42
CSNK1A1-202ENST00000377843 PREPLQ4J6C6 727 aaPredicted RBP17.65■□□□□ 0.42
CSNK1A1-202ENST00000377843 PAPD7Q5XG87 772 aaKnown RBP17.65■□□□□ 0.42
CSNK1A1-202ENST00000377843 TSEN2Q8NCE0 465 aaKnown RBP17.65■□□□□ 0.42
CSNK1A1-202ENST00000377843 N4BP2L2Q92802 583 aaPredicted RBP17.65■□□□□ 0.42
CSNK1A1-202ENST00000377843 C1orf167Q5SNV9 1468 aa17.64■□□□□ 0.41
CSNK1A1-202ENST00000377843 LMTK3Q96Q04 1460 aa17.64■□□□□ 0.41
CSNK1A1-202ENST00000377843 RANBP6O60518 1105 aaKnown RBP17.64■□□□□ 0.41
CSNK1A1-202ENST00000377843 DDX58O95786 925 aaKnown RBP17.64■□□□□ 0.41
CSNK1A1-202ENST00000377843 HERVK_113P62684 666 aa17.64■□□□□ 0.41
CSNK1A1-202ENST00000377843 SH2D3CQ8N5H7 860 aa17.64■□□□□ 0.41
CSNK1A1-202ENST00000377843 DDX21Q9NR30 783 aaKnown RBP eCLIP17.64■□□□□ 0.41
CSNK1A1-202ENST00000377843 ITIH6Q6UXX5 1313 aa17.64■□□□□ 0.41
CSNK1A1-202ENST00000377843 ATXN2Q99700 1313 aaKnown RBP17.64■□□□□ 0.41
CSNK1A1-202ENST00000377843 A0A087X0B3 334 aa17.64■□□□□ 0.41
CSNK1A1-202ENST00000377843 CHUKO15111 745 aa17.64■□□□□ 0.41
CSNK1A1-202ENST00000377843 PTPREP23469 700 aa17.64■□□□□ 0.41
CSNK1A1-202ENST00000377843 ACTN3Q08043 901 aaPredicted RBP17.64■□□□□ 0.41
CSNK1A1-202ENST00000377843 TRDNQ13061 729 aa17.64■□□□□ 0.41
CSNK1A1-202ENST00000377843 ZNF530Q6P9A1 599 aaPredicted RBP17.64■□□□□ 0.41
CSNK1A1-202ENST00000377843 EPN1Q9Y6I3 576 aaPredicted RBP17.64■□□□□ 0.41
CSNK1A1-202ENST00000377843 OVOS2A0A0G2JMS6 1433 aa17.63■□□□□ 0.41
CSNK1A1-202ENST00000377843 NDUFA10O95299 355 aa17.63■□□□□ 0.41
CSNK1A1-202ENST00000377843 GCP02774 474 aa17.63■□□□□ 0.41
CSNK1A1-202ENST00000377843 MYL6BP14649 208 aa17.63■□□□□ 0.41
CSNK1A1-202ENST00000377843 SKOR1P84550 965 aa17.63■□□□□ 0.41
CSNK1A1-202ENST00000377843 JAKMIP2Q96AA8 810 aa17.63■□□□□ 0.41
CSNK1A1-202ENST00000377843 NUP88Q99567 741 aaPredicted RBP17.63■□□□□ 0.41
CSNK1A1-202ENST00000377843 FAM184BQ9ULE4 1060 aa17.63■□□□□ 0.41
CSNK1A1-202ENST00000377843 KRT9P35527 623 aa17.63■□□□□ 0.41
CSNK1A1-202ENST00000377843 ATP1A2P50993 1020 aa17.63■□□□□ 0.41
CSNK1A1-202ENST00000377843 KRT31Q15323 416 aa17.63■□□□□ 0.41
CSNK1A1-202ENST00000377843 IMMTQ16891 758 aaKnown RBP17.63■□□□□ 0.41
CSNK1A1-202ENST00000377843 MAP3K15Q6ZN16 1313 aa17.62■□□□□ 0.41
CSNK1A1-202ENST00000377843 BTBD18B2RXH4 712 aa17.62■□□□□ 0.41
CSNK1A1-202ENST00000377843 PPP1R3GB7ZBB8 358 aa17.62■□□□□ 0.41
CSNK1A1-202ENST00000377843 GOLGA8KD6RF30 607 aa17.62■□□□□ 0.41
CSNK1A1-202ENST00000377843 KIAA0754O94854 1291 aa17.62■□□□□ 0.41
CSNK1A1-202ENST00000377843 PAX7P23759 505 aa17.62■□□□□ 0.41
CSNK1A1-202ENST00000377843 AFMP43652 599 aa17.62■□□□□ 0.41
CSNK1A1-202ENST00000377843 METAP2P50579 478 aaKnown RBP eCLIP17.62■□□□□ 0.41
CSNK1A1-202ENST00000377843 UBE3BQ7Z3V4 1068 aa17.62■□□□□ 0.41
CSNK1A1-202ENST00000377843 VPS16Q9H269 839 aa17.62■□□□□ 0.41
CSNK1A1-202ENST00000377843 DMGDHQ9UI17 866 aaKnown RBP17.62■□□□□ 0.41
CSNK1A1-202ENST00000377843 CPDO75976 1380 aa17.62■□□□□ 0.41
CSNK1A1-202ENST00000377843 RNMTO43148 476 aaKnown RBP17.62■□□□□ 0.41
CSNK1A1-202ENST00000377843 RABL6Q3YEC7 729 aaPredicted RBP17.62■□□□□ 0.41
CSNK1A1-202ENST00000377843 B4GALNT4Q76KP1 1039 aa17.62■□□□□ 0.41
CSNK1A1-202ENST00000377843 KLC4Q9NSK0 619 aa17.62■□□□□ 0.41
CSNK1A1-202ENST00000377843 UBN2Q6ZU65 1347 aa17.61■□□□□ 0.41
CSNK1A1-202ENST00000377843 RCCD1A6NED2 376 aa17.61■□□□□ 0.41
CSNK1A1-202ENST00000377843 RASSF9O75901 435 aa17.61■□□□□ 0.41
CSNK1A1-202ENST00000377843 NTRK3Q16288 839 aa17.61■□□□□ 0.41
CSNK1A1-202ENST00000377843 FILIP1LQ4L180 1135 aa17.61■□□□□ 0.41
CSNK1A1-202ENST00000377843 CYB5R4Q7L1T6 521 aa17.61■□□□□ 0.41
CSNK1A1-202ENST00000377843 NCOA7Q8NI08 942 aa17.61■□□□□ 0.41
CSNK1A1-202ENST00000377843 XAGE3Q8WTP9 111 aa17.61■□□□□ 0.41
CSNK1A1-202ENST00000377843 AIDAQ96BJ3 306 aa17.61■□□□□ 0.41
CSNK1A1-202ENST00000377843 MYL10Q9BUA6 226 aa17.61■□□□□ 0.41
CSNK1A1-202ENST00000377843 AXIN2Q9Y2T1 843 aa17.61■□□□□ 0.41
CSNK1A1-202ENST00000377843 PCDHB6Q9Y5E3 794 aa17.61■□□□□ 0.41
CSNK1A1-202ENST00000377843 NAP1L1P55209 391 aaKnown RBP17.61■□□□□ 0.41
CSNK1A1-202ENST00000377843 AKAP4Q5JQC9 854 aa17.61■□□□□ 0.41
CSNK1A1-202ENST00000377843 FKBP15Q5T1M5 1219 aa17.61■□□□□ 0.41
CSNK1A1-202ENST00000377843 WLSQ5T9L3 541 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms