RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 RTEL1Q9NZ71 1219 aa16.39■□□□□ 0.21
TCOF1-202ENST00000377797 SERPINB13Q9UIV8 391 aa16.39■□□□□ 0.21
TCOF1-202ENST00000377797 SNW1Q13573 536 aaKnown RBP16.39■□□□□ 0.21
TCOF1-202ENST00000377797 SHPRHQ149N8 1683 aa16.39■□□□□ 0.21
TCOF1-202ENST00000377797 FMNL1O95466 1100 aaPredicted RBP16.39■□□□□ 0.21
TCOF1-202ENST00000377797 CMA1P23946 247 aa16.39■□□□□ 0.21
TCOF1-202ENST00000377797 SV2BQ7L1I2 683 aa16.39■□□□□ 0.21
TCOF1-202ENST00000377797 MAPK8IP1Q9UQF2 711 aa16.39■□□□□ 0.21
TCOF1-202ENST00000377797 CLEC11AQ9Y240 323 aa16.39■□□□□ 0.21
TCOF1-202ENST00000377797 RPAP1Q9BWH6 1393 aaPredicted RBP16.39■□□□□ 0.21
TCOF1-202ENST00000377797 NF2P35240 595 aa16.39■□□□□ 0.21
TCOF1-202ENST00000377797 POSTNQ15063 836 aa16.39■□□□□ 0.21
TCOF1-202ENST00000377797 CLIC6Q96NY7 704 aa16.39■□□□□ 0.21
TCOF1-202ENST00000377797 TMX1Q9H3N1 280 aa16.39■□□□□ 0.21
TCOF1-202ENST00000377797 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.39■□□□□ 0.21
TCOF1-202ENST00000377797 BIN2Q9UBW5 565 aaPredicted RBP16.39■□□□□ 0.21
TCOF1-202ENST00000377797 LRWD1Q9UFC0 647 aa16.39■□□□□ 0.21
TCOF1-202ENST00000377797 UBN2Q6ZU65 1347 aa16.38■□□□□ 0.21
TCOF1-202ENST00000377797 KIAA1468Q9P260 1216 aa16.38■□□□□ 0.21
TCOF1-202ENST00000377797 ZNF609O15014 1411 aa16.38■□□□□ 0.21
TCOF1-202ENST00000377797 KIF23Q02241 960 aaPredicted RBP16.38■□□□□ 0.21
TCOF1-202ENST00000377797 TSGA10IPQ3SY00 556 aa16.38■□□□□ 0.21
TCOF1-202ENST00000377797 CPXCR1Q8N123 301 aa16.38■□□□□ 0.21
TCOF1-202ENST00000377797 UIMC1Q96RL1 719 aa16.38■□□□□ 0.21
TCOF1-202ENST00000377797 SERTAD1Q9UHV2 236 aa16.38■□□□□ 0.21
TCOF1-202ENST00000377797 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.38■□□□□ 0.215e-7■■■□□ 16.3
TCOF1-202ENST00000377797 GSG1L2A8MUP6 293 aa16.38■□□□□ 0.21
TCOF1-202ENST00000377797 INF2Q27J81 1249 aa16.38■□□□□ 0.21
TCOF1-202ENST00000377797 STOX1Q6ZVD7 989 aa16.38■□□□□ 0.21
TCOF1-202ENST00000377797 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.38■□□□□ 0.21
TCOF1-202ENST00000377797 CCT6AP40227 531 aaKnown RBP16.37■□□□□ 0.21
TCOF1-202ENST00000377797 NLRP12P59046 1061 aa16.37■□□□□ 0.21
TCOF1-202ENST00000377797 ICA1Q05084 483 aa16.37■□□□□ 0.21
TCOF1-202ENST00000377797 VPS36Q86VN1 386 aa16.37■□□□□ 0.21
TCOF1-202ENST00000377797 MLKLQ8NB16 471 aa16.37■□□□□ 0.21
TCOF1-202ENST00000377797 STAG1Q8WVM7 1258 aa16.37■□□□□ 0.21
TCOF1-202ENST00000377797 PICK1Q9NRD5 415 aa16.37■□□□□ 0.21
TCOF1-202ENST00000377797 KIF13AQ9H1H9 1805 aa16.37■□□□□ 0.21
TCOF1-202ENST00000377797 WDHD1O75717 1129 aaPredicted RBP16.37■□□□□ 0.21
TCOF1-202ENST00000377797 SLC39A14Q15043 492 aa16.37■□□□□ 0.21
TCOF1-202ENST00000377797 CYB5R4Q7L1T6 521 aa16.37■□□□□ 0.21
TCOF1-202ENST00000377797 MB21D2Q8IYB1 491 aaPredicted RBP16.37■□□□□ 0.21
TCOF1-202ENST00000377797 NEDD4P46934 1319 aa16.37■□□□□ 0.21
TCOF1-202ENST00000377797 CYP2D6P10635 497 aa16.37■□□□□ 0.21
TCOF1-202ENST00000377797 NDUFA8P51970 172 aa16.37■□□□□ 0.21
TCOF1-202ENST00000377797 CCDC17Q96LX7 622 aa16.37■□□□□ 0.21
TCOF1-202ENST00000377797 GJB4Q9NTQ9 266 aa16.37■□□□□ 0.21
TCOF1-202ENST00000377797 RCOR1Q9UKL0 485 aa16.37■□□□□ 0.21
TCOF1-202ENST00000377797 CETN1Q12798 172 aa16.37■□□□□ 0.21
TCOF1-202ENST00000377797 RESTQ13127 1097 aa16.37■□□□□ 0.21
TCOF1-202ENST00000377797 ALX1Q15699 326 aa16.37■□□□□ 0.21
TCOF1-202ENST00000377797 CLRN2A0PK11 232 aa16.36■□□□□ 0.21
TCOF1-202ENST00000377797 BICDL2A1A5D9 508 aa16.36■□□□□ 0.21
TCOF1-202ENST00000377797 PNOCQ13519 176 aa16.36■□□□□ 0.21
TCOF1-202ENST00000377797 USO1O60763 962 aaKnown RBP16.36■□□□□ 0.21
TCOF1-202ENST00000377797 CFBP00751 764 aa16.36■□□□□ 0.21
TCOF1-202ENST00000377797 CASQ1P31415 396 aa16.36■□□□□ 0.21
TCOF1-202ENST00000377797 PDE4DQ08499 809 aa16.36■□□□□ 0.21
TCOF1-202ENST00000377797 NR5A1Q13285 461 aa16.36■□□□□ 0.21
TCOF1-202ENST00000377797 ZNF771Q7L3S4 317 aaPredicted RBP16.36■□□□□ 0.21
TCOF1-202ENST00000377797 SH3RF3Q8TEJ3 882 aaPredicted RBP16.36■□□□□ 0.21
TCOF1-202ENST00000377797 SCLT1Q96NL6 688 aa16.36■□□□□ 0.21
TCOF1-202ENST00000377797 PKD2L1Q9P0L9 805 aa16.36■□□□□ 0.21
TCOF1-202ENST00000377797 CALCRLQ16602 461 aa16.36■□□□□ 0.21
TCOF1-202ENST00000377797 SNX29Q8TEQ0 813 aa16.36■□□□□ 0.21
TCOF1-202ENST00000377797 FOXP1Q9H334 677 aaPredicted RBP16.36■□□□□ 0.21
TCOF1-202ENST00000377797 RAD17O75943 681 aa16.36■□□□□ 0.21
TCOF1-202ENST00000377797 GNG11P61952 73 aa16.36■□□□□ 0.21
TCOF1-202ENST00000377797 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.36■□□□□ 0.21
TCOF1-202ENST00000377797 DCP1AQ9NPI6 582 aaPredicted RBP16.36■□□□□ 0.21
TCOF1-202ENST00000377797 POLR3EQ9NVU0 708 aa16.36■□□□□ 0.21
TCOF1-202ENST00000377797 CNTNAP4Q9C0A0 1308 aa16.35■□□□□ 0.21
TCOF1-202ENST00000377797 USP17L3A6NCW0 530 aa16.35■□□□□ 0.21
TCOF1-202ENST00000377797 USP17L4A6NCW7 530 aa16.35■□□□□ 0.21
TCOF1-202ENST00000377797 GOLGA6L9A6NEM1 432 aa16.35■□□□□ 0.21
TCOF1-202ENST00000377797 PRKG1Q13976 671 aa16.35■□□□□ 0.21
TCOF1-202ENST00000377797 TEX35Q5T0J7 233 aa16.35■□□□□ 0.21
TCOF1-202ENST00000377797 PRR5LQ6MZQ0 368 aa16.35■□□□□ 0.21
TCOF1-202ENST00000377797 USP17L1Q7RTZ2 530 aa16.35■□□□□ 0.21
TCOF1-202ENST00000377797 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.35■□□□□ 0.21
TCOF1-202ENST00000377797 GTPBP4Q9BZE4 634 aaKnown RBP16.35■□□□□ 0.21
TCOF1-202ENST00000377797 NFE2L3Q9Y4A8 694 aa16.35■□□□□ 0.21
TCOF1-202ENST00000377797 PLEKHG2Q9H7P9 1386 aa16.35■□□□□ 0.21
TCOF1-202ENST00000377797 AKR1B10O60218 316 aa16.35■□□□□ 0.21
TCOF1-202ENST00000377797 SLFN13Q68D06 897 aa16.35■□□□□ 0.21
TCOF1-202ENST00000377797 PTGDRQ13258 359 aa16.35■□□□□ 0.21
TCOF1-202ENST00000377797 A0A1W2PQ27 194 aa16.35■□□□□ 0.21
TCOF1-202ENST00000377797 A0A1W2PQ64 194 aa16.35■□□□□ 0.21
TCOF1-202ENST00000377797 A0A1W2PQD8 194 aa16.35■□□□□ 0.21
TCOF1-202ENST00000377797 TNFAIP1Q13829 316 aa16.35■□□□□ 0.21
TCOF1-202ENST00000377797 LINC00301Q8NCQ3 95 aa16.35■□□□□ 0.21
TCOF1-202ENST00000377797 MMRN2Q9H8L6 949 aa16.35■□□□□ 0.21
TCOF1-202ENST00000377797 ZBTB21Q9ULJ3 1066 aa16.35■□□□□ 0.21
TCOF1-202ENST00000377797 ZDHHC9Q9Y397 364 aa16.35■□□□□ 0.21
TCOF1-202ENST00000377797 H7C1D1 291 aa16.34■□□□□ 0.21
TCOF1-202ENST00000377797 CC2D2BQ6DHV5 1058 aa16.34■□□□□ 0.21
TCOF1-202ENST00000377797 CSRNP1Q96S65 589 aa16.34■□□□□ 0.21
TCOF1-202ENST00000377797 SALL3Q9BXA9 1300 aa16.34■□□□□ 0.21
TCOF1-202ENST00000377797 GPSM2P81274 684 aa16.34■□□□□ 0.21
TCOF1-202ENST00000377797 FANCCQ00597 558 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms