RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 EPB41L5Q9HCM4 733 aa11.38□□□□□ -0.59
CD28-202ENST00000374481 MTMR7Q9Y216 660 aa11.38□□□□□ -0.59
CD28-202ENST00000374481 IFIT3O14879 490 aaKnown RBP11.37□□□□□ -0.59
CD28-202ENST00000374481 IFIT1P09914 478 aaKnown RBP11.37□□□□□ -0.59
CD28-202ENST00000374481 UBA7P41226 1012 aa11.37□□□□□ -0.59
CD28-202ENST00000374481 ARID5AQ03989 594 aa11.37□□□□□ -0.59
CD28-202ENST00000374481 CCDC13Q8IYE1 715 aa11.37□□□□□ -0.59
CD28-202ENST00000374481 FGD4Q96M96 766 aa11.37□□□□□ -0.59
CD28-202ENST00000374481 PANX2Q96RD6 677 aa11.37□□□□□ -0.59
CD28-202ENST00000374481 EPN3Q9H201 632 aa11.37□□□□□ -0.59
CD28-202ENST00000374481 CD2APQ9Y5K6 639 aa11.37□□□□□ -0.59
CD28-202ENST00000374481 hCG_2014768A0A024R1R8 64 aa11.37□□□□□ -0.59
CD28-202ENST00000374481 CIB2O75838 187 aa11.37□□□□□ -0.59
CD28-202ENST00000374481 ARHGEF25Q86VW2 580 aa11.37□□□□□ -0.59
CD28-202ENST00000374481 B4GALNT2Q8NHY0 566 aa11.37□□□□□ -0.59
CD28-202ENST00000374481 NACAP1Q9BZK3 213 aa11.37□□□□□ -0.59
CD28-202ENST00000374481 HOMER3Q9NSC5 361 aa11.37□□□□□ -0.59
CD28-202ENST00000374481 INTS9Q9NV88 658 aaKnown RBP11.37□□□□□ -0.59
CD28-202ENST00000374481 UTP11Q9Y3A2 253 aaKnown RBP11.37□□□□□ -0.59
CD28-202ENST00000374481 TMEM232C9JQI7 657 aa11.37□□□□□ -0.59
CD28-202ENST00000374481 STXBP3O00186 592 aa11.37□□□□□ -0.59
CD28-202ENST00000374481 HEXIM1O94992 359 aaKnown RBP11.37□□□□□ -0.59
CD28-202ENST00000374481 ATP5DP30049 168 aa11.37□□□□□ -0.59
CD28-202ENST00000374481 SLC7A5Q01650 507 aa11.37□□□□□ -0.59
CD28-202ENST00000374481 SPTY2D1Q68D10 685 aaPredicted RBP11.37□□□□□ -0.59
CD28-202ENST00000374481 RCSD1Q6JBY9 416 aa11.37□□□□□ -0.59
CD28-202ENST00000374481 TTC5Q8N0Z6 440 aa11.37□□□□□ -0.59
CD28-202ENST00000374481 ZKSCAN4Q969J2 545 aaPredicted RBP11.37□□□□□ -0.59
CD28-202ENST00000374481 C19orf44Q9H6X5 657 aa11.37□□□□□ -0.59
CD28-202ENST00000374481 HPCAL4Q9UM19 191 aa11.37□□□□□ -0.59
CD28-202ENST00000374481 MBD5Q9P267 1494 aa11.36□□□□□ -0.59
CD28-202ENST00000374481 VWA3AA6NCI4 1184 aa11.36□□□□□ -0.59
CD28-202ENST00000374481 TRIM75PA6NK02 468 aa11.36□□□□□ -0.59
CD28-202ENST00000374481 PRC1O43663 620 aa11.36□□□□□ -0.59
CD28-202ENST00000374481 RFC1P35251 1148 aaPredicted RBP11.36□□□□□ -0.59
CD28-202ENST00000374481 CCDC65Q8IXS2 484 aa11.36□□□□□ -0.59
CD28-202ENST00000374481 PAPOLBQ9NRJ5 636 aaKnown RBP11.36□□□□□ -0.59
CD28-202ENST00000374481 ANAPC4Q9UJX5 808 aa11.36□□□□□ -0.59
CD28-202ENST00000374481 MAGI2Q86UL8 1455 aa11.36□□□□□ -0.59
CD28-202ENST00000374481 PI4KAP2A4QPH2 592 aa11.36□□□□□ -0.59
CD28-202ENST00000374481 ZBTB43O43298 467 aa11.36□□□□□ -0.59
CD28-202ENST00000374481 BMP15O95972 392 aa11.36□□□□□ -0.59
CD28-202ENST00000374481 FBLN1P23142 703 aa11.36□□□□□ -0.59
CD28-202ENST00000374481 ZBTB17Q13105 803 aa11.36□□□□□ -0.59
CD28-202ENST00000374481 PI4KAP1Q8N8J0 262 aa11.36□□□□□ -0.59
CD28-202ENST00000374481 LMBR1Q8WVP7 490 aa11.36□□□□□ -0.59
CD28-202ENST00000374481 FBXO3Q9UK99 471 aa11.36□□□□□ -0.59
CD28-202ENST00000374481 SHANK2Q9UPX8 1470 aa11.36□□□□□ -0.59
CD28-202ENST00000374481 PAPOLAP51003 745 aaKnown RBP11.36□□□□□ -0.59
CD28-202ENST00000374481 ADCY2Q08462 1091 aa11.36□□□□□ -0.59
CD28-202ENST00000374481 RESTQ13127 1097 aa11.36□□□□□ -0.59
CD28-202ENST00000374481 HHATQ5VTY9 493 aa11.36□□□□□ -0.59
CD28-202ENST00000374481 ATP6V0A4Q9HBG4 840 aa11.36□□□□□ -0.59
CD28-202ENST00000374481 RTEL1Q9NZ71 1219 aa11.36□□□□□ -0.59
CD28-202ENST00000374481 PREPLQ4J6C6 727 aaPredicted RBP11.36□□□□□ -0.59
CD28-202ENST00000374481 GRIPAP1Q4V328 841 aa11.36□□□□□ -0.59
CD28-202ENST00000374481 SDCCAG8Q86SQ7 713 aaPredicted RBP11.36□□□□□ -0.59
CD28-202ENST00000374481 ARHGAP24Q8N264 748 aa11.36□□□□□ -0.59
CD28-202ENST00000374481 KLHDC4Q8TBB5 520 aa11.36□□□□□ -0.59
CD28-202ENST00000374481 NUP58Q9BVL2 599 aa11.36□□□□□ -0.59
CD28-202ENST00000374481 MAPK8IP1Q9UQF2 711 aa11.36□□□□□ -0.59
CD28-202ENST00000374481 ADGRG1Q9Y653 693 aa11.36□□□□□ -0.59
CD28-202ENST00000374481 RPAP1Q9BWH6 1393 aaPredicted RBP11.36□□□□□ -0.59
CD28-202ENST00000374481 NUTM2BA6NNL0 878 aaPredicted RBP11.35□□□□□ -0.59
CD28-202ENST00000374481 NUTM2EB1AL46 878 aaPredicted RBP11.35□□□□□ -0.59
CD28-202ENST00000374481 MRPS25P82663 173 aaKnown RBP11.35□□□□□ -0.59
CD28-202ENST00000374481 TMEM67Q5HYA8 995 aa11.35□□□□□ -0.59
CD28-202ENST00000374481 DENND2CQ68D51 928 aa11.35□□□□□ -0.59
CD28-202ENST00000374481 ARMCX6Q7L4S7 300 aa11.35□□□□□ -0.59
CD28-202ENST00000374481 REXO1L1PQ8IX06 675 aa11.35□□□□□ -0.59
CD28-202ENST00000374481 CUL5Q93034 780 aa11.35□□□□□ -0.59
CD28-202ENST00000374481 PNKPQ96T60 521 aa11.35□□□□□ -0.59
CD28-202ENST00000374481 AATFQ9NY61 560 aaKnown RBP eCLIP11.35□□□□□ -0.59
CD28-202ENST00000374481 NOVA2Q9UNW9 492 aaKnown RBP11.35□□□□□ -0.59
CD28-202ENST00000374481 PA2G4Q9UQ80 394 aaKnown RBP11.35□□□□□ -0.59
CD28-202ENST00000374481 CFAP73A6NFT4 308 aa11.35□□□□□ -0.59
CD28-202ENST00000374481 ACTN4O43707 911 aaKnown RBP11.35□□□□□ -0.59
CD28-202ENST00000374481 LSP1P33241 339 aa11.35□□□□□ -0.59
CD28-202ENST00000374481 KCNB1Q14721 858 aa11.35□□□□□ -0.59
CD28-202ENST00000374481 PLCB4Q15147 1175 aa11.35□□□□□ -0.59
CD28-202ENST00000374481 TTF1Q15361 905 aaPredicted RBP11.35□□□□□ -0.59
CD28-202ENST00000374481 ANKRD42Q8N9B4 389 aa11.35□□□□□ -0.59
CD28-202ENST00000374481 POLD4Q9HCU8 107 aa11.35□□□□□ -0.59
CD28-202ENST00000374481 CEP126Q9P2H0 1117 aa11.35□□□□□ -0.59
CD28-202ENST00000374481 PIK3R4Q99570 1358 aa11.35□□□□□ -0.59
CD28-202ENST00000374481 RPS6KA5O75582 802 aa11.35□□□□□ -0.59
CD28-202ENST00000374481 GNAT1P11488 350 aa11.35□□□□□ -0.59
CD28-202ENST00000374481 STAT6P42226 847 aa11.35□□□□□ -0.59
CD28-202ENST00000374481 PAK1Q13153 545 aa11.35□□□□□ -0.59
CD28-202ENST00000374481 G2E3Q7L622 706 aa11.35□□□□□ -0.59
CD28-202ENST00000374481 SH2D3CQ8N5H7 860 aa11.35□□□□□ -0.59
CD28-202ENST00000374481 NOD2Q9HC29 1040 aa11.35□□□□□ -0.59
CD28-202ENST00000374481 FERP16591 822 aa11.34□□□□□ -0.59
CD28-202ENST00000374481 BEND3Q5T5X7 828 aa11.34□□□□□ -0.59
CD28-202ENST00000374481 SPATA1Q5VX52 437 aa11.34□□□□□ -0.59
CD28-202ENST00000374481 CTTNBP2NLQ9P2B4 639 aa11.34□□□□□ -0.59
CD28-202ENST00000374481 STAP2Q9UGK3 403 aa11.34□□□□□ -0.59
CD28-202ENST00000374481 PPP1R9AQ9ULJ8 1098 aa11.34□□□□□ -0.59
CD28-202ENST00000374481 CLIC4Q9Y696 253 aa11.34□□□□□ -0.59
CD28-202ENST00000374481 TTC21AQ8NDW8 1320 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms