RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 LRRC8AQ8IWT6 810 aa15.35■□□□□ 0.05
CLIC4-201ENST00000374379 SYMPKQ92797 1274 aaKnown RBP15.35■□□□□ 0.05
CLIC4-201ENST00000374379 BIN2Q9UBW5 565 aaPredicted RBP15.35■□□□□ 0.05
CLIC4-201ENST00000374379 UBXN1Q04323 297 aa15.35■□□□□ 0.05
CLIC4-201ENST00000374379 BAG1Q99933 345 aaPredicted RBP15.35■□□□□ 0.05
CLIC4-201ENST00000374379 KLRF2D3W0D1 207 aa15.35■□□□□ 0.05
CLIC4-201ENST00000374379 PSMA7O14818 248 aa15.35■□□□□ 0.05
CLIC4-201ENST00000374379 SERPINB2P05120 415 aa15.35■□□□□ 0.05
CLIC4-201ENST00000374379 TNNT3P45378 269 aaPredicted RBP15.35■□□□□ 0.05
CLIC4-201ENST00000374379 TCERG1LQ5VWI1 586 aa15.35■□□□□ 0.05
CLIC4-201ENST00000374379 KLRK1P26718 216 aa15.34■□□□□ 0.05
CLIC4-201ENST00000374379 ZYXQ15942 572 aaKnown RBP15.34■□□□□ 0.05
CLIC4-201ENST00000374379 RBM26Q5T8P6 1007 aaKnown RBP15.34■□□□□ 0.05
CLIC4-201ENST00000374379 IGSF22Q8N9C0 903 aa15.34■□□□□ 0.05
CLIC4-201ENST00000374379 LINC00116Q8NCU8 138 aa15.34■□□□□ 0.05
CLIC4-201ENST00000374379 DRC1Q96MC2 740 aa15.34■□□□□ 0.05
CLIC4-201ENST00000374379 FEZ1Q99689 392 aa15.34■□□□□ 0.05
CLIC4-201ENST00000374379 TAB2Q9NYJ8 693 aa15.34■□□□□ 0.05
CLIC4-201ENST00000374379 GNA11P29992 359 aa15.34■□□□□ 0.05
CLIC4-201ENST00000374379 ENAHQ8N8S7 591 aaPredicted RBP15.34■□□□□ 0.05
CLIC4-201ENST00000374379 KCNB2Q92953 911 aa15.34■□□□□ 0.05
CLIC4-201ENST00000374379 FOXN1O15353 648 aa15.34■□□□□ 0.05
CLIC4-201ENST00000374379 WDHD1O75717 1129 aaPredicted RBP15.34■□□□□ 0.05
CLIC4-201ENST00000374379 CCDC40Q4G0X9 1142 aa15.34■□□□□ 0.05
CLIC4-201ENST00000374379 INTS5Q6P9B9 1019 aaKnown RBP15.34■□□□□ 0.05
CLIC4-201ENST00000374379 KIAA1524Q8TCG1 905 aa15.34■□□□□ 0.05
CLIC4-201ENST00000374379 DESI2Q9BSY9 194 aa15.34■□□□□ 0.05
CLIC4-201ENST00000374379 APBA3O96018 575 aa15.34■□□□□ 0.05
CLIC4-201ENST00000374379 CLEC4GQ6UXB4 293 aa15.34■□□□□ 0.05
CLIC4-201ENST00000374379 DYMQ7RTS9 669 aa15.34■□□□□ 0.05
CLIC4-201ENST00000374379 MYRIPQ8NFW9 859 aa15.34■□□□□ 0.05
CLIC4-201ENST00000374379 RFX7Q2KHR2 1363 aa15.33■□□□□ 0.05
CLIC4-201ENST00000374379 SPATA31A1Q5TZJ5 1347 aa15.33■□□□□ 0.05
CLIC4-201ENST00000374379 SYNRGQ9UMZ2 1314 aa15.33■□□□□ 0.05
CLIC4-201ENST00000374379 FAM205CA6NFA0 338 aa15.33■□□□□ 0.05
CLIC4-201ENST00000374379 RPS6KA4O75676 772 aa15.33■□□□□ 0.05
CLIC4-201ENST00000374379 TMCO3Q6UWJ1 677 aa15.33■□□□□ 0.05
CLIC4-201ENST00000374379 ALDH8A1Q9H2A2 487 aaPredicted RBP15.33■□□□□ 0.05
CLIC4-201ENST00000374379 QTRT2Q9H974 415 aaKnown RBP15.33■□□□□ 0.05
CLIC4-201ENST00000374379 SEPT11Q9NVA2 429 aaKnown RBP15.33■□□□□ 0.05
CLIC4-201ENST00000374379 RMND1Q9NWS8 449 aa15.33■□□□□ 0.05
CLIC4-201ENST00000374379 KNDC1Q76NI1 1749 aa15.33■□□□□ 0.04
CLIC4-201ENST00000374379 POLR3GO15318 223 aaPredicted RBP15.33■□□□□ 0.04
CLIC4-201ENST00000374379 FAM193AP78312 1265 aa15.33■□□□□ 0.04
CLIC4-201ENST00000374379 AMPD3Q01432 767 aa15.33■□□□□ 0.04
CLIC4-201ENST00000374379 HSP90B2PQ58FF3 399 aa15.33■□□□□ 0.04
CLIC4-201ENST00000374379 FMR1NBQ8N0W7 255 aaPredicted RBP15.33■□□□□ 0.04
CLIC4-201ENST00000374379 MLKLQ8NB16 471 aa15.33■□□□□ 0.04
CLIC4-201ENST00000374379 CEP89Q96ST8 783 aa15.33■□□□□ 0.04
CLIC4-201ENST00000374379 THRAP3Q9Y2W1 955 aaKnown RBP15.33■□□□□ 0.04
CLIC4-201ENST00000374379 BLIDQ8IZY5 108 aa15.33■□□□□ 0.04
CLIC4-201ENST00000374379 ATP8A2Q9NTI2 1148 aa15.33■□□□□ 0.04
CLIC4-201ENST00000374379 USP40Q9NVE5 1235 aa15.33■□□□□ 0.04
CLIC4-201ENST00000374379 SMCO2A6NFE2 343 aa15.32■□□□□ 0.04
CLIC4-201ENST00000374379 ERICH4A6NGS2 130 aa15.32■□□□□ 0.04
CLIC4-201ENST00000374379 CCDC144BQ3MJ40 725 aa15.32■□□□□ 0.04
CLIC4-201ENST00000374379 USP17L2Q6R6M4 530 aa15.32■□□□□ 0.04
CLIC4-201ENST00000374379 SEPT12Q8IYM1 358 aa15.32■□□□□ 0.04
CLIC4-201ENST00000374379 MMRN2Q9H8L6 949 aa15.32■□□□□ 0.04
CLIC4-201ENST00000374379 NARFQ9UHQ1 456 aa15.32■□□□□ 0.04
CLIC4-201ENST00000374379 COL5A2P05997 1499 aaPredicted RBP15.32■□□□□ 0.04
CLIC4-201ENST00000374379 NTSR2O95665 410 aa15.32■□□□□ 0.04
CLIC4-201ENST00000374379 ARID5AQ03989 594 aa15.32■□□□□ 0.04
CLIC4-201ENST00000374379 LRP10Q7Z4F1 713 aa15.32■□□□□ 0.04
CLIC4-201ENST00000374379 SH3RF3Q8TEJ3 882 aaPredicted RBP15.32■□□□□ 0.04
CLIC4-201ENST00000374379 RNF26Q9BY78 433 aaPredicted RBP15.32■□□□□ 0.04
CLIC4-201ENST00000374379 HPS5Q9UPZ3 1129 aa15.32■□□□□ 0.04
CLIC4-201ENST00000374379 SLU7O95391 586 aaKnown RBP15.32■□□□□ 0.04
CLIC4-201ENST00000374379 ZNF397Q8NF99 534 aaPredicted RBP15.32■□□□□ 0.04
CLIC4-201ENST00000374379 IGDCC4Q8TDY8 1250 aa15.32■□□□□ 0.04
CLIC4-201ENST00000374379 PDE4DQ08499 809 aa15.31■□□□□ 0.04
CLIC4-201ENST00000374379 SPA17Q15506 151 aa15.31■□□□□ 0.04
CLIC4-201ENST00000374379 FCHSD1Q86WN1 690 aa15.31■□□□□ 0.04
CLIC4-201ENST00000374379 STAG1Q8WVM7 1258 aa15.31■□□□□ 0.04
CLIC4-201ENST00000374379 MRFAP1L1Q96HT8 127 aa15.31■□□□□ 0.04
CLIC4-201ENST00000374379 PUF60Q9UHX1 559 aaKnown RBP15.31■□□□□ 0.04
CLIC4-201ENST00000374379 NFAT5O94916 1531 aa15.31■□□□□ 0.04
CLIC4-201ENST00000374379 WWC2Q6AWC2 1192 aa15.31■□□□□ 0.04
CLIC4-201ENST00000374379 BCL2L12Q9HB09 334 aa15.31■□□□□ 0.04
CLIC4-201ENST00000374379 KDM4FA0A1W2PPD8 638 aa15.31■□□□□ 0.04
CLIC4-201ENST00000374379 FAM170AA1A519 330 aa15.31■□□□□ 0.04
CLIC4-201ENST00000374379 RBM6P78332 1123 aaKnown RBP15.31■□□□□ 0.04
CLIC4-201ENST00000374379 PPP2R5BQ15173 497 aa15.31■□□□□ 0.04
CLIC4-201ENST00000374379 CCDC181Q5TID7 509 aa15.31■□□□□ 0.04
CLIC4-201ENST00000374379 KRT79Q5XKE5 535 aa15.31■□□□□ 0.04
CLIC4-201ENST00000374379 DCP1AQ9NPI6 582 aaPredicted RBP15.31■□□□□ 0.04
CLIC4-201ENST00000374379 XDHP47989 1333 aa15.31■□□□□ 0.04
CLIC4-201ENST00000374379 C3orf67Q6ZVT6 689 aa15.31■□□□□ 0.04
CLIC4-201ENST00000374379 FOXP1Q9H334 677 aaPredicted RBP15.31■□□□□ 0.04
CLIC4-201ENST00000374379 TBC1D7Q9P0N9 293 aa15.31■□□□□ 0.04
CLIC4-201ENST00000374379 GUCA1BQ9UMX6 200 aa15.31■□□□□ 0.04
CLIC4-201ENST00000374379 SMIM22K7EJ46 135 aa15.3■□□□□ 0.04
CLIC4-201ENST00000374379 U2AF2P26368 475 aaKnown RBP eCLIP15.3■□□□□ 0.046e-7■□□□□ 11
CLIC4-201ENST00000374379 TECP42680 631 aa15.3■□□□□ 0.04
CLIC4-201ENST00000374379 MATR3P43243 847 aaKnown RBP eCLIP15.3■□□□□ 0.04
CLIC4-201ENST00000374379 USH1GQ495M9 461 aa15.3■□□□□ 0.04
CLIC4-201ENST00000374379 TSG101Q99816 390 aa15.3■□□□□ 0.04
CLIC4-201ENST00000374379 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.3■□□□□ 0.04
CLIC4-201ENST00000374379 DBNDD1Q9H9R9 158 aa15.3■□□□□ 0.04
CLIC4-201ENST00000374379 PPP6R2O75170 966 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms