RNA–Protein interactions for RNA: ENST00000374232.7

SNX30-201, Transcript of sorting nexin family member 30, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX30, Length 7,622 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-201ENST00000374232 CACNA2D3Q8IZS8 1091 aa16.1■□□□□ 0.17
SNX30-201ENST00000374232 SCYL1Q96KG9 808 aa16.1■□□□□ 0.17
SNX30-201ENST00000374232 NOX5Q96PH1 765 aa16.1■□□□□ 0.17
SNX30-201ENST00000374232 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.1■□□□□ 0.17
SNX30-201ENST00000374232 A1BGP04217 495 aa16.09■□□□□ 0.17
SNX30-201ENST00000374232 GOLGA8HP0CJ92 632 aa16.09■□□□□ 0.17
SNX30-201ENST00000374232 TNNI1P19237 187 aa16.09■□□□□ 0.17
SNX30-201ENST00000374232 TTC38Q5R3I4 469 aa16.09■□□□□ 0.17
SNX30-201ENST00000374232 NSMFQ6X4W1 530 aa16.09■□□□□ 0.17
SNX30-201ENST00000374232 VCX3BQ9H321 246 aa16.09■□□□□ 0.17
SNX30-201ENST00000374232 SUDS3Q9H7L9 328 aaPredicted RBP16.09■□□□□ 0.17
SNX30-201ENST00000374232 FNDC3AQ9Y2H6 1198 aaKnown RBP16.09■□□□□ 0.17
SNX30-201ENST00000374232 GPAA1O43292 621 aa16.09■□□□□ 0.17
SNX30-201ENST00000374232 FAM102BQ5T8I3 360 aa16.09■□□□□ 0.17
SNX30-201ENST00000374232 KCTD16Q68DU8 428 aa16.09■□□□□ 0.17
SNX30-201ENST00000374232 NSMCE1Q8WV22 266 aa16.09■□□□□ 0.17
SNX30-201ENST00000374232 PCF11O94913 1555 aaKnown RBP16.09■□□□□ 0.17
SNX30-201ENST00000374232 SERTAD1Q9UHV2 236 aa16.09■□□□□ 0.17
SNX30-201ENST00000374232 GRIN2BQ13224 1484 aa16.09■□□□□ 0.17
SNX30-201ENST00000374232 TROQ12816 1431 aaPredicted RBP16.09■□□□□ 0.17
SNX30-201ENST00000374232 CAVIN2O95810 425 aa16.09■□□□□ 0.17
SNX30-201ENST00000374232 CNGA1P29973 690 aa16.09■□□□□ 0.17
SNX30-201ENST00000374232 TECP42680 631 aa16.09■□□□□ 0.17
SNX30-201ENST00000374232 CALCRLQ16602 461 aa16.09■□□□□ 0.17
SNX30-201ENST00000374232 UBL4BQ8N7F7 174 aa16.09■□□□□ 0.17
SNX30-201ENST00000374232 PRPF6O94906 941 aaKnown RBP16.09■□□□□ 0.17
SNX30-201ENST00000374232 RABGAP1Q9Y3P9 1069 aa16.09■□□□□ 0.17
SNX30-201ENST00000374232 EXOC3O60645 756 aa16.08■□□□□ 0.17
SNX30-201ENST00000374232 CAPN7Q9Y6W3 813 aa16.08■□□□□ 0.17
SNX30-201ENST00000374232 SMIM24O75264 130 aa16.08■□□□□ 0.17
SNX30-201ENST00000374232 ATF7P17544 494 aaPredicted RBP16.08■□□□□ 0.17
SNX30-201ENST00000374232 PRR16Q569H4 304 aa16.08■□□□□ 0.17
SNX30-201ENST00000374232 IFT20Q8IY31 132 aa16.08■□□□□ 0.17
SNX30-201ENST00000374232 PPP1R16BQ96T49 567 aa16.08■□□□□ 0.17
SNX30-201ENST00000374232 KLHL30Q0D2K2 578 aa16.08■□□□□ 0.16
SNX30-201ENST00000374232 CABS1Q96KC9 395 aa16.08■□□□□ 0.16
SNX30-201ENST00000374232 DDX41Q9UJV9 622 aaKnown RBP16.08■□□□□ 0.16
SNX30-201ENST00000374232 DIS3L2Q8IYB7 885 aaKnown RBP16.08■□□□□ 0.16
SNX30-201ENST00000374232 CSRNP2Q9H175 543 aa16.08■□□□□ 0.16
SNX30-201ENST00000374232 KCNK3O14649 394 aa16.08■□□□□ 0.16
SNX30-201ENST00000374232 AKAP4Q5JQC9 854 aa16.08■□□□□ 0.16
SNX30-201ENST00000374232 CNNM4Q6P4Q7 775 aa16.08■□□□□ 0.16
SNX30-201ENST00000374232 PEX26Q7Z412 305 aa16.08■□□□□ 0.16
SNX30-201ENST00000374232 POSTNQ15063 836 aa16.07■□□□□ 0.16
SNX30-201ENST00000374232 KRT71Q3SY84 523 aa16.07■□□□□ 0.16
SNX30-201ENST00000374232 CCDC13Q8IYE1 715 aa16.07■□□□□ 0.16
SNX30-201ENST00000374232 CLIC6Q96NY7 704 aa16.07■□□□□ 0.16
SNX30-201ENST00000374232 NFE2L3Q9Y4A8 694 aa16.07■□□□□ 0.16
SNX30-201ENST00000374232 BRAPQ7Z569 592 aa16.07■□□□□ 0.16
SNX30-201ENST00000374232 LMNTD2Q8IXW0 634 aa16.07■□□□□ 0.16
SNX30-201ENST00000374232 SNX21Q969T3 373 aa16.07■□□□□ 0.16
SNX30-201ENST00000374232 ERO1AQ96HE7 468 aa16.07■□□□□ 0.16
SNX30-201ENST00000374232 INPP5FQ9Y2H2 1132 aa16.07■□□□□ 0.16
SNX30-201ENST00000374232 CC2D2AQ9P2K1 1620 aa16.07■□□□□ 0.16
SNX30-201ENST00000374232 VAMP4O75379 141 aa16.07■□□□□ 0.16
SNX30-201ENST00000374232 ZNF853P0CG23 659 aa16.07■□□□□ 0.16
SNX30-201ENST00000374232 IGBP1P78318 339 aa16.07■□□□□ 0.16
SNX30-201ENST00000374232 THRAP3Q9Y2W1 955 aaKnown RBP16.07■□□□□ 0.16
SNX30-201ENST00000374232 RIPOR2Q9Y4F9 1068 aa16.07■□□□□ 0.16
SNX30-201ENST00000374232 PNMA6EA0A0J9YXQ4 647 aa16.07■□□□□ 0.16
SNX30-201ENST00000374232 CETN3O15182 167 aa16.07■□□□□ 0.16
SNX30-201ENST00000374232 NR1I2O75469 434 aa16.07■□□□□ 0.16
SNX30-201ENST00000374232 LIN9Q5TKA1 542 aa16.07■□□□□ 0.16
SNX30-201ENST00000374232 DENND2CQ68D51 928 aa16.07■□□□□ 0.16
SNX30-201ENST00000374232 MMS19Q96T76 1030 aa16.07■□□□□ 0.16
SNX30-201ENST00000374232 APOL6Q9BWW8 343 aa16.07■□□□□ 0.16
SNX30-201ENST00000374232 MAGEA1P43355 309 aa16.07■□□□□ 0.16
SNX30-201ENST00000374232 LIG3P49916 1009 aa16.07■□□□□ 0.16
SNX30-201ENST00000374232 UBXN2AP68543 259 aa16.07■□□□□ 0.16
SNX30-201ENST00000374232 CABP7Q86V35 215 aa16.07■□□□□ 0.16
SNX30-201ENST00000374232 POMGNT1Q8WZA1 660 aa16.07■□□□□ 0.16
SNX30-201ENST00000374232 SEC31AO94979 1220 aaKnown RBP16.07■□□□□ 0.16
SNX30-201ENST00000374232 ZAP70P43403 619 aa16.07■□□□□ 0.16
SNX30-201ENST00000374232 LGR6Q9HBX8 967 aa16.07■□□□□ 0.16
SNX30-201ENST00000374232 RBM28Q9NW13 759 aaKnown RBP16.07■□□□□ 0.16
SNX30-201ENST00000374232 PRXQ9BXM0 1461 aa16.07■□□□□ 0.16
SNX30-201ENST00000374232 ATP5DP30049 168 aa16.06■□□□□ 0.16
SNX30-201ENST00000374232 XPO4Q9C0E2 1151 aaKnown RBP16.06■□□□□ 0.16
SNX30-201ENST00000374232 SLC12A2P55011 1212 aa16.06■□□□□ 0.16
SNX30-201ENST00000374232 MUM1Q2TAK8 710 aa16.06■□□□□ 0.16
SNX30-201ENST00000374232 ANKRD13CQ8N6S4 541 aa16.06■□□□□ 0.16
SNX30-201ENST00000374232 MICAL1Q8TDZ2 1067 aa16.06■□□□□ 0.16
SNX30-201ENST00000374232 PLCG2P16885 1265 aa16.06■□□□□ 0.16
SNX30-201ENST00000374232 GNGT1P63211 74 aa16.06■□□□□ 0.16
SNX30-201ENST00000374232 TNNI3KQ59H18 835 aa16.06■□□□□ 0.16
SNX30-201ENST00000374232 TTBK2Q6IQ55 1244 aa16.06■□□□□ 0.16
SNX30-201ENST00000374232 FPGT-TNNI3KV9GXZ4 949 aa16.06■□□□□ 0.16
SNX30-201ENST00000374232 ACTN4O43707 911 aaKnown RBP16.06■□□□□ 0.16
SNX30-201ENST00000374232 PALM2Q8IXS6 379 aa16.06■□□□□ 0.16
SNX30-201ENST00000374232 GPKOWQ92917 476 aaPredicted RBP eCLIP16.06■□□□□ 0.16
SNX30-201ENST00000374232 ARHGEF10LQ9HCE6 1279 aa16.06■□□□□ 0.16
SNX30-201ENST00000374232 I3L4J1 428 aa16.06■□□□□ 0.16
SNX30-201ENST00000374232 LPXNO60711 386 aa16.06■□□□□ 0.16
SNX30-201ENST00000374232 PKP1Q13835 747 aa16.06■□□□□ 0.16
SNX30-201ENST00000374232 CARD10Q9BWT7 1032 aa16.06■□□□□ 0.16
SNX30-201ENST00000374232 GNAT2P19087 354 aa16.05■□□□□ 0.16
SNX30-201ENST00000374232 NLRP12P59046 1061 aa16.05■□□□□ 0.16
SNX30-201ENST00000374232 SNX1Q13596 522 aa16.05■□□□□ 0.16
SNX30-201ENST00000374232 HP1BP3Q5SSJ5 553 aaPredicted RBP16.05■□□□□ 0.16
SNX30-201ENST00000374232 B4GALNT4Q76KP1 1039 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms