RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 MTMR4Q9NYA4 1195 aa17.17■□□□□ 0.34
SMPDL3B-201ENST00000373888 TPCN1Q9ULQ1 816 aa17.17■□□□□ 0.34
SMPDL3B-201ENST00000373888 K7ELQ4 463 aaPredicted RBP17.16■□□□□ 0.34
SMPDL3B-201ENST00000373888 GH2P01242 217 aa17.16■□□□□ 0.34
SMPDL3B-201ENST00000373888 APOBRQ0VD83 1088 aa17.16■□□□□ 0.34
SMPDL3B-201ENST00000373888 IFIT1BQ5T764 474 aaKnown RBP17.16■□□□□ 0.34
SMPDL3B-201ENST00000373888 NOL8Q76FK4 1167 aaKnown RBP17.16■□□□□ 0.34
SMPDL3B-201ENST00000373888 LARP6Q9BRS8 491 aaKnown RBP17.16■□□□□ 0.34
SMPDL3B-201ENST00000373888 KANSL2Q9H9L4 492 aa17.16■□□□□ 0.34
SMPDL3B-201ENST00000373888 ZBTB21Q9ULJ3 1066 aa17.16■□□□□ 0.34
SMPDL3B-201ENST00000373888 PPP1R12BO60237 982 aaPredicted RBP17.16■□□□□ 0.34
SMPDL3B-201ENST00000373888 USP2O75604 605 aaPredicted RBP17.16■□□□□ 0.34
SMPDL3B-201ENST00000373888 CHADLQ6NUI6 762 aa17.16■□□□□ 0.34
SMPDL3B-201ENST00000373888 ZNF274Q96GC6 653 aaPredicted RBP17.16■□□□□ 0.34
SMPDL3B-201ENST00000373888 ZSCAN31Q96LW9 406 aaPredicted RBP17.16■□□□□ 0.34
SMPDL3B-201ENST00000373888 WRNIP1Q96S55 665 aa17.16■□□□□ 0.34
SMPDL3B-201ENST00000373888 BRPF3Q9ULD4 1205 aa17.16■□□□□ 0.34
SMPDL3B-201ENST00000373888 STX8Q9UNK0 236 aa17.16■□□□□ 0.34
SMPDL3B-201ENST00000373888 PAPPA2Q9BXP8 1791 aa17.15■□□□□ 0.34
SMPDL3B-201ENST00000373888 KLF18A0A0U1RQI7 1052 aa17.15■□□□□ 0.34
SMPDL3B-201ENST00000373888 CCDC69A6NI79 296 aa17.15■□□□□ 0.34
SMPDL3B-201ENST00000373888 TTLL1O95922 423 aa17.15■□□□□ 0.34
SMPDL3B-201ENST00000373888 ASNSP08243 561 aa17.15■□□□□ 0.34
SMPDL3B-201ENST00000373888 INPP5BP32019 993 aa17.15■□□□□ 0.34
SMPDL3B-201ENST00000373888 ICA1Q05084 483 aa17.15■□□□□ 0.34
SMPDL3B-201ENST00000373888 SEPT2Q15019 361 aa17.15■□□□□ 0.34
SMPDL3B-201ENST00000373888 MAP3K11Q16584 847 aa17.15■□□□□ 0.34
SMPDL3B-201ENST00000373888 NFXL1Q6ZNB6 911 aa17.15■□□□□ 0.34
SMPDL3B-201ENST00000373888 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.15■□□□□ 0.34
SMPDL3B-201ENST00000373888 TMX3Q96JJ7 454 aa17.15■□□□□ 0.34
SMPDL3B-201ENST00000373888 SH2B1Q9NRF2 756 aaPredicted RBP17.15■□□□□ 0.34
SMPDL3B-201ENST00000373888 NYAP2Q9P242 653 aa17.15■□□□□ 0.34
SMPDL3B-201ENST00000373888 FZD1Q9UP38 647 aa17.15■□□□□ 0.34
SMPDL3B-201ENST00000373888 TRAF5O00463 557 aa17.14■□□□□ 0.33
SMPDL3B-201ENST00000373888 KIF3CO14782 793 aa17.14■□□□□ 0.33
SMPDL3B-201ENST00000373888 IREB2P48200 963 aaKnown RBP17.14■□□□□ 0.33
SMPDL3B-201ENST00000373888 RCAN1P53805 252 aa17.14■□□□□ 0.33
SMPDL3B-201ENST00000373888 RAB3GAP1Q15042 981 aa17.14■□□□□ 0.33
SMPDL3B-201ENST00000373888 ME3Q16798 604 aa17.14■□□□□ 0.33
SMPDL3B-201ENST00000373888 NOL9Q5SY16 702 aaKnown RBP17.14■□□□□ 0.33
SMPDL3B-201ENST00000373888 APOA5Q6Q788 366 aa17.14■□□□□ 0.33
SMPDL3B-201ENST00000373888 CLEC10AQ8IUN9 316 aa17.14■□□□□ 0.33
SMPDL3B-201ENST00000373888 TMEM47Q9BQJ4 181 aa17.14■□□□□ 0.33
SMPDL3B-201ENST00000373888 SLC12A7Q9Y666 1083 aa17.14■□□□□ 0.33
SMPDL3B-201ENST00000373888 ATAD5Q96QE3 1844 aa17.14■□□□□ 0.33
SMPDL3B-201ENST00000373888 DOCK1Q14185 1865 aa17.14■□□□□ 0.33
SMPDL3B-201ENST00000373888 LARGE1O95461 756 aa17.13■□□□□ 0.33
SMPDL3B-201ENST00000373888 ITGBL1O95965 494 aaPredicted RBP17.13■□□□□ 0.33
SMPDL3B-201ENST00000373888 TOP1P11387 765 aaKnown RBP17.13■□□□□ 0.33
SMPDL3B-201ENST00000373888 PDIA3P30101 505 aaKnown RBP17.13■□□□□ 0.33
SMPDL3B-201ENST00000373888 SCYL3Q8IZE3 742 aa17.13■□□□□ 0.33
SMPDL3B-201ENST00000373888 ZNF654Q8IZM8 581 aa17.13■□□□□ 0.33
SMPDL3B-201ENST00000373888 MKL1Q969V6 931 aa17.13■□□□□ 0.33
SMPDL3B-201ENST00000373888 KAT14Q9H8E8 782 aa17.13■□□□□ 0.33
SMPDL3B-201ENST00000373888 NID2Q14112 1375 aa17.13■□□□□ 0.33
SMPDL3B-201ENST00000373888 GOLGA8BA8MQT2 603 aa17.12■□□□□ 0.33
SMPDL3B-201ENST00000373888 PFKFB2O60825 505 aa17.12■□□□□ 0.33
SMPDL3B-201ENST00000373888 EEF2P13639 858 aaKnown RBP17.12■□□□□ 0.33
SMPDL3B-201ENST00000373888 PRKG1Q13976 671 aa17.12■□□□□ 0.33
SMPDL3B-201ENST00000373888 CATIPQ7Z7H3 387 aa17.12■□□□□ 0.33
SMPDL3B-201ENST00000373888 SIAH1Q8IUQ4 282 aa17.12■□□□□ 0.33
SMPDL3B-201ENST00000373888 PNMA1Q8ND90 353 aa17.12■□□□□ 0.33
SMPDL3B-201ENST00000373888 ZKSCAN4Q969J2 545 aaPredicted RBP17.12■□□□□ 0.33
SMPDL3B-201ENST00000373888 CLIP2Q9UDT6 1046 aa17.12■□□□□ 0.33
SMPDL3B-201ENST00000373888 SYNPO2Q9UMS6 1093 aa17.12■□□□□ 0.33
SMPDL3B-201ENST00000373888 HPS5Q9UPZ3 1129 aa17.12■□□□□ 0.33
SMPDL3B-201ENST00000373888 OTOFQ9HC10 1997 aa17.12■□□□□ 0.33
SMPDL3B-201ENST00000373888 ZBTB43O43298 467 aa17.11■□□□□ 0.33
SMPDL3B-201ENST00000373888 DDAH1O94760 285 aa17.11■□□□□ 0.33
SMPDL3B-201ENST00000373888 MAP3K9P80192 1104 aa17.11■□□□□ 0.33
SMPDL3B-201ENST00000373888 TROAPQ12815 778 aa17.11■□□□□ 0.33
SMPDL3B-201ENST00000373888 CUL4AQ13619 759 aa17.11■□□□□ 0.33
SMPDL3B-201ENST00000373888 SYNE3Q6ZMZ3 975 aa17.11■□□□□ 0.33
SMPDL3B-201ENST00000373888 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.11■□□□□ 0.33
SMPDL3B-201ENST00000373888 CALM1P0DP23 149 aa17.11■□□□□ 0.33
SMPDL3B-201ENST00000373888 CALM2P0DP24 149 aa17.11■□□□□ 0.33
SMPDL3B-201ENST00000373888 CALM3P0DP25 149 aa17.11■□□□□ 0.33
SMPDL3B-201ENST00000373888 YY1P25490 414 aa17.11■□□□□ 0.33
SMPDL3B-201ENST00000373888 FKBP1BP68106 108 aa17.11■□□□□ 0.33
SMPDL3B-201ENST00000373888 FMR1Q06787 632 aaKnown RBP eCLIP17.11■□□□□ 0.33
SMPDL3B-201ENST00000373888 ARMC9Q7Z3E5 817 aa17.11■□□□□ 0.33
SMPDL3B-201ENST00000373888 MICU3Q86XE3 530 aa17.11■□□□□ 0.33
SMPDL3B-201ENST00000373888 GTF3C6Q969F1 213 aa17.11■□□□□ 0.33
SMPDL3B-201ENST00000373888 MYL10Q9BUA6 226 aa17.11■□□□□ 0.33
SMPDL3B-201ENST00000373888 SLKQ9H2G2 1235 aaPredicted RBP17.11■□□□□ 0.33
SMPDL3B-201ENST00000373888 PICK1Q9NRD5 415 aa17.11■□□□□ 0.33
SMPDL3B-201ENST00000373888 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.11■□□□□ 0.33
SMPDL3B-201ENST00000373888 NAP1L2Q9ULW6 460 aaPredicted RBP17.11■□□□□ 0.33
SMPDL3B-201ENST00000373888 USP17L5A8MUK1 530 aa17.1■□□□□ 0.33
SMPDL3B-201ENST00000373888 METAP2P50579 478 aaKnown RBP eCLIP17.1■□□□□ 0.33
SMPDL3B-201ENST00000373888 ST3GAL1Q11201 340 aa17.1■□□□□ 0.33
SMPDL3B-201ENST00000373888 STK3Q13188 491 aa17.1■□□□□ 0.33
SMPDL3B-201ENST00000373888 VGLL4Q14135 290 aa17.1■□□□□ 0.33
SMPDL3B-201ENST00000373888 TTLL12Q14166 644 aaPredicted RBP17.1■□□□□ 0.33
SMPDL3B-201ENST00000373888 ANKRD13AQ8IZ07 590 aa17.1■□□□□ 0.33
SMPDL3B-201ENST00000373888 LRRC47Q8N1G4 583 aaKnown RBP17.1■□□□□ 0.33
SMPDL3B-201ENST00000373888 MAP3K14Q99558 947 aa17.1■□□□□ 0.33
SMPDL3B-201ENST00000373888 ARHGEF10LQ9HCE6 1279 aa17.1■□□□□ 0.33
SMPDL3B-201ENST00000373888 SNCAIPQ9Y6H5 919 aa17.1■□□□□ 0.33
SMPDL3B-201ENST00000373888 A0A1W2PRG0 241 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms