RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 IKBKBO14920 756 aa10.03□□□□□ -0.8
SNRNP40-202ENST00000373720 ADCY5O95622 1261 aa10.03□□□□□ -0.8
SNRNP40-202ENST00000373720 NPR1P16066 1061 aa10.03□□□□□ -0.8
SNRNP40-202ENST00000373720 CDC27P30260 824 aa10.03□□□□□ -0.8
SNRNP40-202ENST00000373720 CTDSPL2Q05D32 466 aa10.03□□□□□ -0.8
SNRNP40-202ENST00000373720 TROAPQ12815 778 aa10.03□□□□□ -0.8
SNRNP40-202ENST00000373720 COL9A3Q14050 684 aaPredicted RBP10.03□□□□□ -0.8
SNRNP40-202ENST00000373720 CC2D2BQ6DHV5 1058 aa10.03□□□□□ -0.8
SNRNP40-202ENST00000373720 NBPF11Q86T75 865 aa10.03□□□□□ -0.8
SNRNP40-202ENST00000373720 FSIP1Q8NA03 581 aa10.03□□□□□ -0.8
SNRNP40-202ENST00000373720 CCDC148Q8NFR7 591 aa10.03□□□□□ -0.8
SNRNP40-202ENST00000373720 SLC26A6Q9BXS9 759 aa10.03□□□□□ -0.8
SNRNP40-202ENST00000373720 KIAA1468Q9P260 1216 aa10.03□□□□□ -0.8
SNRNP40-202ENST00000373720 IMPACTQ9P2X3 320 aa10.03□□□□□ -0.8
SNRNP40-202ENST00000373720 SRP68Q9UHB9 627 aaKnown RBP10.03□□□□□ -0.8
SNRNP40-202ENST00000373720 MKRN1Q9UHC7 482 aaKnown RBP10.03□□□□□ -0.8
SNRNP40-202ENST00000373720 HPSEQ9Y251 543 aa10.03□□□□□ -0.8
SNRNP40-202ENST00000373720 MRVI1Q9Y6F6 885 aa10.03□□□□□ -0.8
SNRNP40-202ENST00000373720 MROH7-TTC4A0A0A0MT08 1334 aa10.03□□□□□ -0.8
SNRNP40-202ENST00000373720 USP17L12C9JPN9 530 aa10.02□□□□□ -0.81
SNRNP40-202ENST00000373720 USP17L21D6R901 530 aa10.02□□□□□ -0.81
SNRNP40-202ENST00000373720 PRKAB2O43741 272 aa10.02□□□□□ -0.81
SNRNP40-202ENST00000373720 OFD1O75665 1012 aa10.02□□□□□ -0.81
SNRNP40-202ENST00000373720 MMP14P50281 582 aa10.02□□□□□ -0.81
SNRNP40-202ENST00000373720 HDLBPQ00341 1268 aaKnown RBP10.02□□□□□ -0.81
SNRNP40-202ENST00000373720 PDAP1Q13442 181 aaKnown RBP10.02□□□□□ -0.81
SNRNP40-202ENST00000373720 RESP18Q5W5W9 173 aa10.02□□□□□ -0.81
SNRNP40-202ENST00000373720 ARL6IP4Q66PJ3 421 aaKnown RBP10.02□□□□□ -0.81
SNRNP40-202ENST00000373720 ZNF444Q8N0Y2 327 aaPredicted RBP10.02□□□□□ -0.81
SNRNP40-202ENST00000373720 ENAHQ8N8S7 591 aaPredicted RBP10.02□□□□□ -0.81
SNRNP40-202ENST00000373720 MIGA1Q8NAN2 632 aa10.02□□□□□ -0.81
SNRNP40-202ENST00000373720 CD209Q9NNX6 404 aa10.02□□□□□ -0.81
SNRNP40-202ENST00000373720 SWAP70Q9UH65 585 aa10.02□□□□□ -0.81
SNRNP40-202ENST00000373720 ATP6V0A2Q9Y487 856 aa10.02□□□□□ -0.81
SNRNP40-202ENST00000373720 SRPRBQ9Y5M8 271 aaKnown RBP10.02□□□□□ -0.81
SNRNP40-202ENST00000373720 UBR3Q6ZT12 1888 aa10.02□□□□□ -0.81
SNRNP40-202ENST00000373720 MYH13Q9UKX3 1938 aa10.01□□□□□ -0.81
SNRNP40-202ENST00000373720 RGPD3A6NKT7 1758 aaPredicted RBP10.01□□□□□ -0.81
SNRNP40-202ENST00000373720 RGPD4Q7Z3J3 1758 aa10.01□□□□□ -0.81
SNRNP40-202ENST00000373720 TSPY2A6NKD2 308 aa10.01□□□□□ -0.81
SNRNP40-202ENST00000373720 RANBP6O60518 1105 aaKnown RBP10.01□□□□□ -0.81
SNRNP40-202ENST00000373720 ZNF202O95125 648 aa10.01□□□□□ -0.81
SNRNP40-202ENST00000373720 MYL1P05976 194 aa10.01□□□□□ -0.81
SNRNP40-202ENST00000373720 PTPREP23469 700 aa10.01□□□□□ -0.81
SNRNP40-202ENST00000373720 HSPA1LP34931 641 aa10.01□□□□□ -0.81
SNRNP40-202ENST00000373720 KRT2P35908 639 aa10.01□□□□□ -0.81
SNRNP40-202ENST00000373720 SYKP43405 635 aa10.01□□□□□ -0.81
SNRNP40-202ENST00000373720 USP5P45974 858 aa10.01□□□□□ -0.81
SNRNP40-202ENST00000373720 GSDMDP57764 484 aa10.01□□□□□ -0.81
SNRNP40-202ENST00000373720 PTPAQ15257 358 aa10.01□□□□□ -0.81
SNRNP40-202ENST00000373720 ANO6Q4KMQ2 910 aa10.01□□□□□ -0.81
SNRNP40-202ENST00000373720 RRP12Q5JTH9 1297 aaKnown RBP10.01□□□□□ -0.81
SNRNP40-202ENST00000373720 AXDND1Q5T1B0 1012 aaPredicted RBP10.01□□□□□ -0.81
SNRNP40-202ENST00000373720 MCTP2Q6DN12 878 aa10.01□□□□□ -0.81
SNRNP40-202ENST00000373720 FAM173BQ6P4H8 233 aa10.01□□□□□ -0.81
SNRNP40-202ENST00000373720 TMTC3Q6ZXV5 915 aa10.01□□□□□ -0.81
SNRNP40-202ENST00000373720 DIS3L2Q8IYB7 885 aaKnown RBP10.01□□□□□ -0.81
SNRNP40-202ENST00000373720 RNF214Q8ND24 703 aa10.01□□□□□ -0.81
SNRNP40-202ENST00000373720 PHF20Q9BVI0 1012 aa10.01□□□□□ -0.81
SNRNP40-202ENST00000373720 KAT14Q9H8E8 782 aa10.01□□□□□ -0.81
SNRNP40-202ENST00000373720 MKNK2Q9HBH9 465 aa10.01□□□□□ -0.81
SNRNP40-202ENST00000373720 ANO8Q9HCE9 1232 aaPredicted RBP10.01□□□□□ -0.81
SNRNP40-202ENST00000373720 TUBE1Q9UJT0 475 aa10.01□□□□□ -0.81
SNRNP40-202ENST00000373720 GAKO14976 1311 aa10.01□□□□□ -0.81
SNRNP40-202ENST00000373720 DLEC1Q9Y238 1755 aa10.01□□□□□ -0.81
SNRNP40-202ENST00000373720 COL1A1P02452 1464 aaPredicted RBP10□□□□□ -0.81
SNRNP40-202ENST00000373720 A0A0G2JLW4 131 aa10□□□□□ -0.81
SNRNP40-202ENST00000373720 TRIM75PA6NK02 468 aa10□□□□□ -0.81
SNRNP40-202ENST00000373720 POLRMTO00411 1230 aaKnown RBP10□□□□□ -0.81
SNRNP40-202ENST00000373720 CBFA2T2O43439 604 aa10□□□□□ -0.81
SNRNP40-202ENST00000373720 SMC2O95347 1197 aa10□□□□□ -0.81
SNRNP40-202ENST00000373720 POLR3DP05423 398 aaPredicted RBP10□□□□□ -0.81
SNRNP40-202ENST00000373720 TPM2P07951 284 aa10□□□□□ -0.81
SNRNP40-202ENST00000373720 NOVP48745 357 aa10□□□□□ -0.81
SNRNP40-202ENST00000373720 NLRP12P59046 1061 aa10□□□□□ -0.81
SNRNP40-202ENST00000373720 TXNRD1Q16881 649 aa10□□□□□ -0.81
SNRNP40-202ENST00000373720 NT5DC1Q5TFE4 455 aa10□□□□□ -0.81
SNRNP40-202ENST00000373720 DPY19L2Q6NUT2 758 aa10□□□□□ -0.81
SNRNP40-202ENST00000373720 PODNQ7Z5L7 613 aa10□□□□□ -0.81
SNRNP40-202ENST00000373720 ADGRA1Q86SQ6 560 aa10□□□□□ -0.81
SNRNP40-202ENST00000373720 PLA2G4DQ86XP0 818 aa10□□□□□ -0.81
SNRNP40-202ENST00000373720 SDR42E1Q8WUS8 393 aa10□□□□□ -0.81
SNRNP40-202ENST00000373720 PIBF1Q8WXW3 757 aa10□□□□□ -0.81
SNRNP40-202ENST00000373720 CHAMP1Q96JM3 812 aa10□□□□□ -0.81
SNRNP40-202ENST00000373720 GLT8D2Q9H1C3 349 aa10□□□□□ -0.81
SNRNP40-202ENST00000373720 VPS33BQ9H267 617 aa10□□□□□ -0.81
SNRNP40-202ENST00000373720 CBX8Q9HC52 389 aa10□□□□□ -0.81
SNRNP40-202ENST00000373720 MCM9Q9NXL9 1143 aa10□□□□□ -0.81
SNRNP40-202ENST00000373720 AATFQ9NY61 560 aaKnown RBP eCLIP10□□□□□ -0.81
SNRNP40-202ENST00000373720 SYNPO2Q9UMS6 1093 aa10□□□□□ -0.81
SNRNP40-202ENST00000373720 CASZ1Q86V15 1759 aa10□□□□□ -0.81
SNRNP40-202ENST00000373720 LAMB1P07942 1786 aa9.99□□□□□ -0.81
SNRNP40-202ENST00000373720 POTEB3A0JP26 581 aa9.99□□□□□ -0.81
SNRNP40-202ENST00000373720 UFL1O94874 794 aa9.99□□□□□ -0.81
SNRNP40-202ENST00000373720 KCNJ6P48051 423 aa9.99□□□□□ -0.81
SNRNP40-202ENST00000373720 FUT2Q10981 343 aa9.99□□□□□ -0.81
SNRNP40-202ENST00000373720 IQCB1Q15051 598 aa9.99□□□□□ -0.81
SNRNP40-202ENST00000373720 CAMK4Q16566 473 aa9.99□□□□□ -0.81
SNRNP40-202ENST00000373720 PFKFB3Q16875 520 aaPredicted RBP9.99□□□□□ -0.81
SNRNP40-202ENST00000373720 POTEBQ6S5H4 581 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms