RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 AKR1B1P15121 316 aa14.33□□□□□ -0.12
HDAC8-201ENST00000373554 USP14P54578 494 aa14.33□□□□□ -0.12
HDAC8-201ENST00000373554 DGKZQ13574 1117 aa14.33□□□□□ -0.12
HDAC8-201ENST00000373554 SEPT2Q15019 361 aa14.33□□□□□ -0.12
HDAC8-201ENST00000373554 TREML2Q5T2D2 321 aa14.33□□□□□ -0.12
HDAC8-201ENST00000373554 STK11IPQ8N1F8 1099 aa14.33□□□□□ -0.12
HDAC8-201ENST00000373554 SMCR8Q8TEV9 937 aaPredicted RBP14.33□□□□□ -0.12
HDAC8-201ENST00000373554 MKNK2Q9HBH9 465 aa14.33□□□□□ -0.12
HDAC8-201ENST00000373554 GUCY1A2P33402 732 aa14.32□□□□□ -0.12
HDAC8-201ENST00000373554 PPARAQ07869 468 aa14.32□□□□□ -0.12
HDAC8-201ENST00000373554 ZYXQ15942 572 aaKnown RBP14.32□□□□□ -0.12
HDAC8-201ENST00000373554 VPS53Q5VIR6 699 aa14.32□□□□□ -0.12
HDAC8-201ENST00000373554 USP17L2Q6R6M4 530 aa14.32□□□□□ -0.12
HDAC8-201ENST00000373554 CWC27Q6UX04 472 aaKnown RBP14.32□□□□□ -0.12
HDAC8-201ENST00000373554 ZNF589Q86UQ0 364 aaPredicted RBP14.32□□□□□ -0.12
HDAC8-201ENST00000373554 KIAA1683Q9H0B3 1180 aa14.32□□□□□ -0.12
HDAC8-201ENST00000373554 FOXP2O15409 715 aa14.31□□□□□ -0.12
HDAC8-201ENST00000373554 RASA1P20936 1047 aa14.31□□□□□ -0.12
HDAC8-201ENST00000373554 OSBPP22059 807 aa14.31□□□□□ -0.12
HDAC8-201ENST00000373554 IRX3P78415 501 aaPredicted RBP14.31□□□□□ -0.12
HDAC8-201ENST00000373554 MLLT1Q03111 559 aaPredicted RBP14.31□□□□□ -0.12
HDAC8-201ENST00000373554 ICA1Q05084 483 aa14.31□□□□□ -0.12
HDAC8-201ENST00000373554 PDE4BQ07343 736 aa14.31□□□□□ -0.12
HDAC8-201ENST00000373554 KIF22Q14807 665 aa14.31□□□□□ -0.12
HDAC8-201ENST00000373554 ARHGEF6Q15052 776 aa14.31□□□□□ -0.12
HDAC8-201ENST00000373554 CD99L2Q8TCZ2 262 aa14.31□□□□□ -0.12
HDAC8-201ENST00000373554 SH2D4AQ9H788 454 aa14.31□□□□□ -0.12
HDAC8-201ENST00000373554 ARHGEF10LQ9HCE6 1279 aa14.31□□□□□ -0.12
HDAC8-201ENST00000373554 CPA4Q9UI42 421 aa14.31□□□□□ -0.12
HDAC8-201ENST00000373554 ADGRA2Q96PE1 1338 aa14.31□□□□□ -0.12
HDAC8-201ENST00000373554 HSPD1P10809 573 aaKnown RBP14.3□□□□□ -0.12
HDAC8-201ENST00000373554 ALX1Q15699 326 aa14.3□□□□□ -0.12
HDAC8-201ENST00000373554 PKN2Q16513 984 aaKnown RBP14.3□□□□□ -0.12
HDAC8-201ENST00000373554 C17orf99Q6UX52 265 aa14.3□□□□□ -0.12
HDAC8-201ENST00000373554 ZNF444Q8N0Y2 327 aaPredicted RBP14.3□□□□□ -0.12
HDAC8-201ENST00000373554 ACER1Q8TDN7 264 aa14.3□□□□□ -0.12
HDAC8-201ENST00000373554 C12orf42Q96LP6 360 aa14.3□□□□□ -0.12
HDAC8-201ENST00000373554 MCOLN1Q9GZU1 580 aa14.3□□□□□ -0.12
HDAC8-201ENST00000373554 KANSL2Q9H9L4 492 aa14.3□□□□□ -0.12
HDAC8-201ENST00000373554 EMILIN3Q9NT22 766 aa14.3□□□□□ -0.12
HDAC8-201ENST00000373554 TRIM17Q9Y577 477 aa14.3□□□□□ -0.12
HDAC8-201ENST00000373554 ZMYM6O95789 1325 aa14.3□□□□□ -0.12
HDAC8-201ENST00000373554 PRDM1O75626 825 aa14.29□□□□□ -0.12
HDAC8-201ENST00000373554 LACTBP83111 547 aaPredicted RBP14.29□□□□□ -0.12
HDAC8-201ENST00000373554 CLEC10AQ8IUN9 316 aa14.29□□□□□ -0.12
HDAC8-201ENST00000373554 RUFY2Q8WXA3 655 aa14.29□□□□□ -0.12
HDAC8-201ENST00000373554 ASCC2Q9H1I8 757 aaPredicted RBP14.29□□□□□ -0.12
HDAC8-201ENST00000373554 RAD50Q92878 1312 aa14.29□□□□□ -0.12
HDAC8-201ENST00000373554 FGAP02671 866 aa14.28□□□□□ -0.12
HDAC8-201ENST00000373554 BCRP11274 1271 aa14.28□□□□□ -0.12
HDAC8-201ENST00000373554 VCAM1P19320 739 aa14.28□□□□□ -0.12
HDAC8-201ENST00000373554 HOXA7P31268 230 aaPredicted RBP14.28□□□□□ -0.12
HDAC8-201ENST00000373554 GCLCP48506 637 aaPredicted RBP14.28□□□□□ -0.12
HDAC8-201ENST00000373554 ATP2B2Q01814 1243 aa14.28□□□□□ -0.12
HDAC8-201ENST00000373554 OTOP1Q7RTM1 612 aa14.28□□□□□ -0.12
HDAC8-201ENST00000373554 EFCC1Q9HA90 598 aa14.28□□□□□ -0.12
HDAC8-201ENST00000373554 ANAPC4Q9UJX5 808 aa14.28□□□□□ -0.12
HDAC8-201ENST00000373554 PLIN4Q96Q06 1357 aa14.27□□□□□ -0.12
HDAC8-201ENST00000373554 A0A1W2PRG0 241 aa14.27□□□□□ -0.13
HDAC8-201ENST00000373554 TSPY3P0CV98 308 aa14.27□□□□□ -0.13
HDAC8-201ENST00000373554 TSPY8P0CW00 308 aa14.27□□□□□ -0.13
HDAC8-201ENST00000373554 EEF2P13639 858 aaKnown RBP14.27□□□□□ -0.13
HDAC8-201ENST00000373554 CTDSPL2Q05D32 466 aa14.27□□□□□ -0.13
HDAC8-201ENST00000373554 FBXO46Q6PJ61 603 aaPredicted RBP14.27□□□□□ -0.13
HDAC8-201ENST00000373554 ANKRD13CQ8N6S4 541 aa14.27□□□□□ -0.13
HDAC8-201ENST00000373554 LPAR1Q92633 364 aa14.27□□□□□ -0.13
HDAC8-201ENST00000373554 ABHD8Q96I13 439 aa14.27□□□□□ -0.13
HDAC8-201ENST00000373554 TMX2Q9Y320 296 aa14.27□□□□□ -0.13
HDAC8-201ENST00000373554 GREB1LQ9C091 1923 aaPredicted RBP14.27□□□□□ -0.13
HDAC8-201ENST00000373554 USP17L15C9J2P7 530 aa14.26□□□□□ -0.13
HDAC8-201ENST00000373554 USP17L13C9JLJ4 530 aa14.26□□□□□ -0.13
HDAC8-201ENST00000373554 USP17L11C9JVI0 530 aa14.26□□□□□ -0.13
HDAC8-201ENST00000373554 USP17L18D6R9N7 530 aa14.26□□□□□ -0.13
HDAC8-201ENST00000373554 USP17L22D6RA61 530 aa14.26□□□□□ -0.13
HDAC8-201ENST00000373554 USP17L17D6RBQ6 530 aa14.26□□□□□ -0.13
HDAC8-201ENST00000373554 USP17L19D6RCP7 530 aa14.26□□□□□ -0.13
HDAC8-201ENST00000373554 USP17L20D6RJB6 530 aa14.26□□□□□ -0.13
HDAC8-201ENST00000373554 GNRH1P01148 92 aa14.26□□□□□ -0.13
HDAC8-201ENST00000373554 CHMLP26374 656 aa14.26□□□□□ -0.13
HDAC8-201ENST00000373554 USP17L24Q0WX57 530 aa14.26□□□□□ -0.13
HDAC8-201ENST00000373554 FAM110CQ1W6H9 321 aa14.26□□□□□ -0.13
HDAC8-201ENST00000373554 ERICH6BQ5W0A0 696 aa14.26□□□□□ -0.13
HDAC8-201ENST00000373554 GTF3C2Q8WUA4 911 aaPredicted RBP14.26□□□□□ -0.13
HDAC8-201ENST00000373554 DSCC1Q9BVC3 393 aa14.26□□□□□ -0.13
HDAC8-201ENST00000373554 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.26□□□□□ -0.13
HDAC8-201ENST00000373554 RPAP3Q9H6T3 665 aaPredicted RBP14.26□□□□□ -0.13
HDAC8-201ENST00000373554 VCPKMTQ9H867 229 aa14.26□□□□□ -0.13
HDAC8-201ENST00000373554 GOPCQ9HD26 462 aa14.26□□□□□ -0.13
HDAC8-201ENST00000373554 TOMM22Q9NS69 142 aa14.26□□□□□ -0.13
HDAC8-201ENST00000373554 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.26□□□□□ -0.13
HDAC8-201ENST00000373554 TSPY2A6NKD2 308 aa14.25□□□□□ -0.13
HDAC8-201ENST00000373554 ECM2O94769 699 aaPredicted RBP14.25□□□□□ -0.13
HDAC8-201ENST00000373554 FMNL1O95466 1100 aaPredicted RBP14.25□□□□□ -0.13
HDAC8-201ENST00000373554 PCP11498 1178 aaKnown RBP14.25□□□□□ -0.13
HDAC8-201ENST00000373554 PSMC4P43686 418 aa14.25□□□□□ -0.13
HDAC8-201ENST00000373554 FCGRTP55899 365 aa14.25□□□□□ -0.13
HDAC8-201ENST00000373554 HAND2P61296 217 aa14.25□□□□□ -0.13
HDAC8-201ENST00000373554 HERVK_113P62684 666 aa14.25□□□□□ -0.13
HDAC8-201ENST00000373554 TFAP4Q01664 338 aa14.25□□□□□ -0.13
HDAC8-201ENST00000373554 SIAH1Q8IUQ4 282 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms