RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 SHC4Q6S5L8 630 aa19.49■□□□□ 0.71
VEGFA-205ENST00000372067 RBM43Q6ZSC3 357 aaKnown RBP19.49■□□□□ 0.71
VEGFA-205ENST00000372067 KIF18AQ8NI77 898 aa19.49■□□□□ 0.71
VEGFA-205ENST00000372067 SKILP12757 684 aa19.48■□□□□ 0.71
VEGFA-205ENST00000372067 ATP2B2Q01814 1243 aa19.48■□□□□ 0.71
VEGFA-205ENST00000372067 PTPN21Q16825 1174 aa19.48■□□□□ 0.71
VEGFA-205ENST00000372067 GRAMD1CQ8IYS0 662 aa19.48■□□□□ 0.71
VEGFA-205ENST00000372067 TRIM37O94972 964 aa19.48■□□□□ 0.71
VEGFA-205ENST00000372067 ZNF827Q17R98 1081 aa19.48■□□□□ 0.71
VEGFA-205ENST00000372067 LONRF3Q496Y0 759 aa19.48■□□□□ 0.71
VEGFA-205ENST00000372067 AXDND1Q5T1B0 1012 aaPredicted RBP19.48■□□□□ 0.71
VEGFA-205ENST00000372067 HOMER1Q86YM7 354 aa19.48■□□□□ 0.71
VEGFA-205ENST00000372067 WDR66Q8TBY9 1149 aa19.48■□□□□ 0.71
VEGFA-205ENST00000372067 GJD4Q96KN9 370 aaPredicted RBP19.48■□□□□ 0.71
VEGFA-205ENST00000372067 RSPH14Q9UHP6 348 aa19.48■□□□□ 0.71
VEGFA-205ENST00000372067 AFF2P51816 1311 aa19.48■□□□□ 0.71
VEGFA-205ENST00000372067 LDHCP07864 332 aa19.48■□□□□ 0.71
VEGFA-205ENST00000372067 PICALMQ13492 652 aa19.48■□□□□ 0.71
VEGFA-205ENST00000372067 CACTINQ8WUQ7 758 aaKnown RBP19.48■□□□□ 0.71
VEGFA-205ENST00000372067 BRIP1Q9BX63 1249 aa19.48■□□□□ 0.71
VEGFA-205ENST00000372067 SERTAD1Q9UHV2 236 aa19.48■□□□□ 0.71
VEGFA-205ENST00000372067 SPEF2Q9C093 1822 aa19.48■□□□□ 0.71
VEGFA-205ENST00000372067 CCDC144BQ3MJ40 725 aa19.47■□□□□ 0.71
VEGFA-205ENST00000372067 RC3H1Q5TC82 1133 aaKnown RBP19.47■□□□□ 0.71
VEGFA-205ENST00000372067 ATRNO75882 1429 aa19.47■□□□□ 0.71
VEGFA-205ENST00000372067 SEMA3EO15041 775 aa19.47■□□□□ 0.71
VEGFA-205ENST00000372067 CALM1P0DP23 149 aa19.47■□□□□ 0.71
VEGFA-205ENST00000372067 CALM2P0DP24 149 aa19.47■□□□□ 0.71
VEGFA-205ENST00000372067 CALM3P0DP25 149 aa19.47■□□□□ 0.71
VEGFA-205ENST00000372067 PIK3AP1Q6ZUJ8 805 aa19.47■□□□□ 0.71
VEGFA-205ENST00000372067 STAMQ92783 540 aa19.47■□□□□ 0.71
VEGFA-205ENST00000372067 SMARCE1Q969G3 411 aa19.47■□□□□ 0.71
VEGFA-205ENST00000372067 KIF5BP33176 963 aa19.47■□□□□ 0.71
VEGFA-205ENST00000372067 MCM7P33993 719 aa19.47■□□□□ 0.71
VEGFA-205ENST00000372067 SLC10A5Q5PT55 438 aa19.47■□□□□ 0.71
VEGFA-205ENST00000372067 XPO4Q9C0E2 1151 aaKnown RBP19.47■□□□□ 0.71
VEGFA-205ENST00000372067 EFCC1Q9HA90 598 aa19.47■□□□□ 0.71
VEGFA-205ENST00000372067 VWA3AA6NCI4 1184 aa19.46■□□□□ 0.71
VEGFA-205ENST00000372067 FOXN1O15353 648 aa19.46■□□□□ 0.71
VEGFA-205ENST00000372067 SERPINB2P05120 415 aa19.46■□□□□ 0.71
VEGFA-205ENST00000372067 TNNT1P13805 278 aa19.46■□□□□ 0.71
VEGFA-205ENST00000372067 GYS2P54840 703 aa19.46■□□□□ 0.71
VEGFA-205ENST00000372067 GRIN1Q05586 938 aa19.46■□□□□ 0.71
VEGFA-205ENST00000372067 GRAPQ13588 217 aa19.46■□□□□ 0.71
VEGFA-205ENST00000372067 SLC44A5Q8NCS7 719 aa19.46■□□□□ 0.71
VEGFA-205ENST00000372067 GRAPLQ8TC17 118 aaPredicted RBP19.46■□□□□ 0.71
VEGFA-205ENST00000372067 KIAA1524Q8TCG1 905 aa19.46■□□□□ 0.71
VEGFA-205ENST00000372067 SH3RF3Q8TEJ3 882 aaPredicted RBP19.46■□□□□ 0.71
VEGFA-205ENST00000372067 RBM28Q9NW13 759 aaKnown RBP19.46■□□□□ 0.71
VEGFA-205ENST00000372067 GGA1Q9UJY5 639 aa19.46■□□□□ 0.71
VEGFA-205ENST00000372067 PCDHA5Q9Y5H7 936 aa19.46■□□□□ 0.71
VEGFA-205ENST00000372067 PPP6R2O75170 966 aa19.46■□□□□ 0.71
VEGFA-205ENST00000372067 GSTO1P78417 241 aa19.46■□□□□ 0.71
VEGFA-205ENST00000372067 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.46■□□□□ 0.71
VEGFA-205ENST00000372067 DHX40Q8IX18 779 aaKnown RBP19.46■□□□□ 0.71
VEGFA-205ENST00000372067 TEX11Q8IYF3 940 aa19.46■□□□□ 0.71
VEGFA-205ENST00000372067 ATP8A2Q9NTI2 1148 aa19.46■□□□□ 0.71
VEGFA-205ENST00000372067 ARPP21Q9UBL0 812 aaPredicted RBP19.46■□□□□ 0.71
VEGFA-205ENST00000372067 HEATR3Q7Z4Q2 680 aa19.45■□□□□ 0.7
VEGFA-205ENST00000372067 PLA2G4DQ86XP0 818 aa19.45■□□□□ 0.7
VEGFA-205ENST00000372067 GPKOWQ92917 476 aaPredicted RBP eCLIP19.45■□□□□ 0.79e-7■□□□□ 11
VEGFA-205ENST00000372067 RNF26Q9BY78 433 aaPredicted RBP19.45■□□□□ 0.7
VEGFA-205ENST00000372067 SLIT2O94813 1529 aa19.45■□□□□ 0.7
VEGFA-205ENST00000372067 SFPQP23246 707 aaKnown RBP eCLIP19.45■□□□□ 0.7
VEGFA-205ENST00000372067 UBASH3AP57075 661 aa19.45■□□□□ 0.7
VEGFA-205ENST00000372067 KRBA2Q6ZNG9 492 aa19.45■□□□□ 0.7
VEGFA-205ENST00000372067 COL16A1Q07092 1604 aaPredicted RBP19.45■□□□□ 0.7
VEGFA-205ENST00000372067 LAMA4Q16363 1823 aa19.45■□□□□ 0.7
VEGFA-205ENST00000372067 USP17L3A6NCW0 530 aa19.45■□□□□ 0.7
VEGFA-205ENST00000372067 USP17L4A6NCW7 530 aa19.45■□□□□ 0.7
VEGFA-205ENST00000372067 CT47A1Q5JQC4 288 aaPredicted RBP19.45■□□□□ 0.7
VEGFA-205ENST00000372067 USP17L1Q7RTZ2 530 aa19.45■□□□□ 0.7
VEGFA-205ENST00000372067 FOXP1Q9H334 677 aaPredicted RBP19.45■□□□□ 0.7
VEGFA-205ENST00000372067 XDHP47989 1333 aa19.44■□□□□ 0.7
VEGFA-205ENST00000372067 STK36Q9NRP7 1315 aa19.44■□□□□ 0.7
VEGFA-205ENST00000372067 MYH14Q7Z406 1995 aaKnown RBP19.44■□□□□ 0.7
VEGFA-205ENST00000372067 GOLGA8HP0CJ92 632 aa19.44■□□□□ 0.7
VEGFA-205ENST00000372067 TRMT44Q8IYL2 757 aaKnown RBP19.44■□□□□ 0.7
VEGFA-205ENST00000372067 CSRNP2Q9H175 543 aa19.44■□□□□ 0.7
VEGFA-205ENST00000372067 QTRT2Q9H974 415 aaKnown RBP19.44■□□□□ 0.7
VEGFA-205ENST00000372067 MYH3P11055 1940 aa19.44■□□□□ 0.7
VEGFA-205ENST00000372067 PES1O00541 588 aaKnown RBP19.44■□□□□ 0.7
VEGFA-205ENST00000372067 STX17P56962 302 aa19.44■□□□□ 0.7
VEGFA-205ENST00000372067 MFSD14BQ5SR56 506 aa19.43■□□□□ 0.7
VEGFA-205ENST00000372067 RBM17Q96I25 401 aaKnown RBP19.43■□□□□ 0.7
VEGFA-205ENST00000372067 AHDC1Q5TGY3 1603 aaPredicted RBP19.43■□□□□ 0.7
VEGFA-205ENST00000372067 PTPAQ15257 358 aa19.43■□□□□ 0.7
VEGFA-205ENST00000372067 MYO5AQ9Y4I1 1855 aaKnown RBP19.43■□□□□ 0.7
VEGFA-205ENST00000372067 CCDC194A0A1B0GVG4 234 aa19.43■□□□□ 0.7
VEGFA-205ENST00000372067 FANCCQ00597 558 aa19.43■□□□□ 0.7
VEGFA-205ENST00000372067 PNMA1Q8ND90 353 aa19.43■□□□□ 0.7
VEGFA-205ENST00000372067 ATP1A3P13637 1013 aa19.42■□□□□ 0.7
VEGFA-205ENST00000372067 BTDP43251 543 aa19.42■□□□□ 0.7
VEGFA-205ENST00000372067 GPSM2P81274 684 aa19.42■□□□□ 0.7
VEGFA-205ENST00000372067 MYL5Q02045 173 aa19.42■□□□□ 0.7
VEGFA-205ENST00000372067 TTC38Q5R3I4 469 aa19.42■□□□□ 0.7
VEGFA-205ENST00000372067 PRR5LQ6MZQ0 368 aa19.42■□□□□ 0.7
VEGFA-205ENST00000372067 ZNF384Q8TF68 577 aa19.42■□□□□ 0.7
VEGFA-205ENST00000372067 TSPYL1Q9H0U9 437 aa19.42■□□□□ 0.7
VEGFA-205ENST00000372067 FAM53CQ9NYF3 392 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms