RNA–Protein interactions for RNA: ENST00000371558.6

UBE2A-202, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBE2A, Length 1,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-202ENST00000371558 FANCBQ8NB91 859 aa16.79■□□□□ 0.28
UBE2A-202ENST00000371558 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.79■□□□□ 0.28
UBE2A-202ENST00000371558 POLR2AP24928 1970 aaKnown RBP16.78■□□□□ 0.28
UBE2A-202ENST00000371558 BRD1O95696 1058 aa16.78■□□□□ 0.28
UBE2A-202ENST00000371558 TNNI2P48788 182 aa16.78■□□□□ 0.28
UBE2A-202ENST00000371558 HMGN5P82970 282 aaKnown RBP16.78■□□□□ 0.28
UBE2A-202ENST00000371558 TROAPQ12815 778 aa16.78■□□□□ 0.28
UBE2A-202ENST00000371558 RASA3Q14644 834 aa16.78■□□□□ 0.28
UBE2A-202ENST00000371558 SHROOM1Q2M3G4 852 aaPredicted RBP16.78■□□□□ 0.28
UBE2A-202ENST00000371558 CERKLQ49MI3 558 aaPredicted RBP16.78■□□□□ 0.28
UBE2A-202ENST00000371558 CCDC82Q8N4S0 544 aa16.78■□□□□ 0.28
UBE2A-202ENST00000371558 PNMA1Q8ND90 353 aa16.78■□□□□ 0.28
UBE2A-202ENST00000371558 PHKBQ93100 1093 aa16.78■□□□□ 0.28
UBE2A-202ENST00000371558 TAOK2Q9UL54 1235 aa16.78■□□□□ 0.28
UBE2A-202ENST00000371558 BAZ2BQ9UIF8 2168 aaKnown RBP16.78■□□□□ 0.28
UBE2A-202ENST00000371558 GREB1LQ9C091 1923 aaPredicted RBP16.78■□□□□ 0.28
UBE2A-202ENST00000371558 NID2Q14112 1375 aa16.78■□□□□ 0.28
UBE2A-202ENST00000371558 GDF11O95390 407 aa16.78■□□□□ 0.28
UBE2A-202ENST00000371558 CPLX2Q6PUV4 134 aaKnown RBP16.78■□□□□ 0.28
UBE2A-202ENST00000371558 TMEM47Q9BQJ4 181 aa16.78■□□□□ 0.28
UBE2A-202ENST00000371558 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.78■□□□□ 0.28
UBE2A-202ENST00000371558 PLIN4Q96Q06 1357 aa16.77■□□□□ 0.28
UBE2A-202ENST00000371558 WDR33Q9C0J8 1336 aaKnown RBP16.77■□□□□ 0.28
UBE2A-202ENST00000371558 DDAH1O94760 285 aa16.77■□□□□ 0.27
UBE2A-202ENST00000371558 FDPSP14324 419 aaKnown RBP16.77■□□□□ 0.27
UBE2A-202ENST00000371558 TATDN1Q6P1N9 297 aa16.77■□□□□ 0.27
UBE2A-202ENST00000371558 ANKS1AQ92625 1134 aa16.77■□□□□ 0.27
UBE2A-202ENST00000371558 ORC3Q9UBD5 711 aaPredicted RBP16.77■□□□□ 0.27
UBE2A-202ENST00000371558 GRIN3BO60391 1043 aa16.76■□□□□ 0.27
UBE2A-202ENST00000371558 CDKL5O76039 1030 aa16.76■□□□□ 0.27
UBE2A-202ENST00000371558 CALM1P0DP23 149 aa16.76■□□□□ 0.27
UBE2A-202ENST00000371558 CALM2P0DP24 149 aa16.76■□□□□ 0.27
UBE2A-202ENST00000371558 CALM3P0DP25 149 aa16.76■□□□□ 0.27
UBE2A-202ENST00000371558 PDCP20941 246 aa16.76■□□□□ 0.27
UBE2A-202ENST00000371558 LMOD1P29536 600 aaPredicted RBP16.76■□□□□ 0.27
UBE2A-202ENST00000371558 RCAN1P53805 252 aa16.76■□□□□ 0.27
UBE2A-202ENST00000371558 TNFAIP1Q13829 316 aa16.76■□□□□ 0.27
UBE2A-202ENST00000371558 NFKBIBQ15653 356 aa16.76■□□□□ 0.27
UBE2A-202ENST00000371558 NTRK3Q16288 839 aa16.76■□□□□ 0.27
UBE2A-202ENST00000371558 ANGEL2Q5VTE6 544 aaKnown RBP16.76■□□□□ 0.27
UBE2A-202ENST00000371558 MIGA2Q7L4E1 593 aa16.76■□□□□ 0.27
UBE2A-202ENST00000371558 METTL16Q86W50 562 aaKnown RBP16.76■□□□□ 0.27
UBE2A-202ENST00000371558 MTMR4Q9NYA4 1195 aa16.76■□□□□ 0.27
UBE2A-202ENST00000371558 MTMR6Q9Y217 621 aa16.76■□□□□ 0.27
UBE2A-202ENST00000371558 CCDC196A0A1B0GTZ2 297 aa16.76■□□□□ 0.27
UBE2A-202ENST00000371558 ATP2B2Q01814 1243 aa16.76■□□□□ 0.27
UBE2A-202ENST00000371558 NBR1Q14596 966 aa16.76■□□□□ 0.27
UBE2A-202ENST00000371558 FOXD4L6Q3SYB3 417 aaPredicted RBP16.76■□□□□ 0.27
UBE2A-202ENST00000371558 FOXD4L3Q6VB84 417 aaPredicted RBP16.76■□□□□ 0.27
UBE2A-202ENST00000371558 CTCFLQ8NI51 663 aaPredicted RBP16.76■□□□□ 0.27
UBE2A-202ENST00000371558 CCDC17Q96LX7 622 aa16.76■□□□□ 0.27
UBE2A-202ENST00000371558 SLC26A6Q9BXS9 759 aa16.76■□□□□ 0.27
UBE2A-202ENST00000371558 HERC5Q9UII4 1024 aaKnown RBP16.76■□□□□ 0.27
UBE2A-202ENST00000371558 IGKV6D-41A0A0C4DH26 115 aa16.75■□□□□ 0.27
UBE2A-202ENST00000371558 PLEKHA8P1O95397 391 aa16.75■□□□□ 0.27
UBE2A-202ENST00000371558 ZSCAN22P10073 491 aaPredicted RBP16.75■□□□□ 0.27
UBE2A-202ENST00000371558 HIRAP54198 1017 aaPredicted RBP16.75■□□□□ 0.27
UBE2A-202ENST00000371558 RRP1BQ14684 758 aaKnown RBP16.75■□□□□ 0.27
UBE2A-202ENST00000371558 CDC37L1Q7L3B6 337 aa16.75■□□□□ 0.27
UBE2A-202ENST00000371558 RASGRP2Q7LDG7 609 aa16.75■□□□□ 0.27
UBE2A-202ENST00000371558 PGAP2Q9UHJ9 254 aa16.75■□□□□ 0.27
UBE2A-202ENST00000371558 KIF3AQ9Y496 699 aa16.75■□□□□ 0.27
UBE2A-202ENST00000371558 TCHHQ07283 1943 aa16.75■□□□□ 0.27
UBE2A-202ENST00000371558 UBE2Q2LH0YL09 131 aa16.74■□□□□ 0.27
UBE2A-202ENST00000371558 H3BQV1 296 aa16.74■□□□□ 0.27
UBE2A-202ENST00000371558 TOP1P11387 765 aaKnown RBP16.74■□□□□ 0.27
UBE2A-202ENST00000371558 ABCB5Q2M3G0 1257 aa16.74■□□□□ 0.27
UBE2A-202ENST00000371558 IFFO2Q5TF58 517 aa16.74■□□□□ 0.27
UBE2A-202ENST00000371558 DPY19L2Q6NUT2 758 aa16.74■□□□□ 0.27
UBE2A-202ENST00000371558 LRRC47Q8N1G4 583 aaKnown RBP16.74■□□□□ 0.27
UBE2A-202ENST00000371558 CHAMP1Q96JM3 812 aa16.74■□□□□ 0.27
UBE2A-202ENST00000371558 DEFB129Q9H1M3 183 aa16.74■□□□□ 0.27
UBE2A-202ENST00000371558 GGA3Q9NZ52 723 aa16.74■□□□□ 0.27
UBE2A-202ENST00000371558 CLIP2Q9UDT6 1046 aa16.74■□□□□ 0.27
UBE2A-202ENST00000371558 TTLL1O95922 423 aa16.73■□□□□ 0.27
UBE2A-202ENST00000371558 IFNAR1P17181 557 aa16.73■□□□□ 0.27
UBE2A-202ENST00000371558 GUCY1B3Q02153 619 aa16.73■□□□□ 0.27
UBE2A-202ENST00000371558 SSRP1Q08945 709 aaKnown RBP16.73■□□□□ 0.27
UBE2A-202ENST00000371558 FERMT3Q86UX7 667 aa16.73■□□□□ 0.27
UBE2A-202ENST00000371558 RBM28Q9NW13 759 aaKnown RBP16.73■□□□□ 0.27
UBE2A-202ENST00000371558 F13A1P00488 732 aa16.73■□□□□ 0.27
UBE2A-202ENST00000371558 GH2P01242 217 aa16.73■□□□□ 0.27
UBE2A-202ENST00000371558 NOVP48745 357 aa16.73■□□□□ 0.27
UBE2A-202ENST00000371558 JAG1P78504 1218 aa16.73■□□□□ 0.27
UBE2A-202ENST00000371558 SEPT2Q15019 361 aa16.73■□□□□ 0.27
UBE2A-202ENST00000371558 PPP2R5BQ15173 497 aa16.73■□□□□ 0.27
UBE2A-202ENST00000371558 TEPSINQ96N21 525 aa16.73■□□□□ 0.27
UBE2A-202ENST00000371558 AIFM3Q96NN9 605 aa16.73■□□□□ 0.27
UBE2A-202ENST00000371558 ADARB2Q9NS39 739 aaKnown RBP16.73■□□□□ 0.27
UBE2A-202ENST00000371558 ATAD5Q96QE3 1844 aa16.72■□□□□ 0.27
UBE2A-202ENST00000371558 FMNL1O95466 1100 aaPredicted RBP16.72■□□□□ 0.27
UBE2A-202ENST00000371558 OTUD7BQ6GQQ9 843 aa16.72■□□□□ 0.27
UBE2A-202ENST00000371558 TMEM179Q6ZVK1 233 aa16.72■□□□□ 0.27
UBE2A-202ENST00000371558 NBPF11Q86T75 865 aa16.72■□□□□ 0.27
UBE2A-202ENST00000371558 APOBEC3FQ8IUX4 373 aaKnown RBP16.72■□□□□ 0.27
UBE2A-202ENST00000371558 TRIM22Q8IYM9 498 aa16.72■□□□□ 0.27
UBE2A-202ENST00000371558 GBP4Q96PP9 640 aa16.72■□□□□ 0.27
UBE2A-202ENST00000371558 GJB4Q9NTQ9 266 aa16.72■□□□□ 0.27
UBE2A-202ENST00000371558 hCG_1642624A0A1W2PR95 340 aa16.71■□□□□ 0.27
UBE2A-202ENST00000371558 BAG4O95429 457 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms