RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 ZHX3Q9H4I2 956 aa12.47□□□□□ -0.41
NECTIN4-201ENST00000368012 ZNHIT6Q9NWK9 470 aaKnown RBP12.47□□□□□ -0.41
NECTIN4-201ENST00000368012 SLIT1O75093 1534 aa12.47□□□□□ -0.41
NECTIN4-201ENST00000368012 TNKSO95271 1327 aa12.47□□□□□ -0.41
NECTIN4-201ENST00000368012 NFAT5O94916 1531 aa12.47□□□□□ -0.41
NECTIN4-201ENST00000368012 TSPY2A6NKD2 308 aa12.47□□□□□ -0.41
NECTIN4-201ENST00000368012 PLEKHA8P1O95397 391 aa12.47□□□□□ -0.41
NECTIN4-201ENST00000368012 KRT2P35908 639 aa12.47□□□□□ -0.41
NECTIN4-201ENST00000368012 STAT6P42226 847 aa12.47□□□□□ -0.41
NECTIN4-201ENST00000368012 RASGRF1Q13972 1273 aa12.47□□□□□ -0.41
NECTIN4-201ENST00000368012 CTR9Q6PD62 1173 aa12.47□□□□□ -0.41
NECTIN4-201ENST00000368012 HDXQ7Z353 690 aa12.47□□□□□ -0.41
NECTIN4-201ENST00000368012 GPATCH11Q8N954 259 aa12.47□□□□□ -0.41
NECTIN4-201ENST00000368012 ESR2Q92731 530 aa12.47□□□□□ -0.41
NECTIN4-201ENST00000368012 SMARCC1Q92922 1105 aaPredicted RBP12.47□□□□□ -0.41
NECTIN4-201ENST00000368012 RASSF4Q9H2L5 321 aa12.47□□□□□ -0.41
NECTIN4-201ENST00000368012 MED1Q15648 1581 aaPredicted RBP12.47□□□□□ -0.41
NECTIN4-201ENST00000368012 CRYBG1Q9Y4K1 1723 aa12.47□□□□□ -0.41
NECTIN4-201ENST00000368012 NMT2O60551 498 aa12.46□□□□□ -0.41
NECTIN4-201ENST00000368012 IL2RBP14784 551 aa12.46□□□□□ -0.41
NECTIN4-201ENST00000368012 MTIF2P46199 727 aaKnown RBP12.46□□□□□ -0.41
NECTIN4-201ENST00000368012 FXR1P51114 621 aaKnown RBP eCLIP12.46□□□□□ -0.41
NECTIN4-201ENST00000368012 DYNLL1P63167 89 aaKnown RBP12.46□□□□□ -0.41
NECTIN4-201ENST00000368012 PTPROQ16827 1216 aa12.46□□□□□ -0.41
NECTIN4-201ENST00000368012 KANK3Q6NY19 840 aa12.46□□□□□ -0.41
NECTIN4-201ENST00000368012 RIN2Q8WYP3 895 aaPredicted RBP12.46□□□□□ -0.41
NECTIN4-201ENST00000368012 NAPGQ99747 312 aaPredicted RBP12.46□□□□□ -0.41
NECTIN4-201ENST00000368012 ACBD3Q9H3P7 528 aa12.46□□□□□ -0.41
NECTIN4-201ENST00000368012 GNL3LQ9NVN8 582 aaKnown RBP12.46□□□□□ -0.41
NECTIN4-201ENST00000368012 STX8Q9UNK0 236 aa12.46□□□□□ -0.41
NECTIN4-201ENST00000368012 GDAQ9Y2T3 454 aa12.46□□□□□ -0.41
NECTIN4-201ENST00000368012 TRIM49BA6NDI0 452 aa12.46□□□□□ -0.41
NECTIN4-201ENST00000368012 FANCGO15287 622 aa12.46□□□□□ -0.41
NECTIN4-201ENST00000368012 IDEP14735 1019 aa12.46□□□□□ -0.41
NECTIN4-201ENST00000368012 UBA7P41226 1012 aa12.46□□□□□ -0.41
NECTIN4-201ENST00000368012 KCNQ4P56696 695 aa12.46□□□□□ -0.41
NECTIN4-201ENST00000368012 CEP112Q8N8E3 955 aa12.46□□□□□ -0.41
NECTIN4-201ENST00000368012 IGDCC4Q8TDY8 1250 aa12.46□□□□□ -0.41
NECTIN4-201ENST00000368012 RUFY1Q96T51 708 aa12.46□□□□□ -0.41
NECTIN4-201ENST00000368012 TUBE1Q9UJT0 475 aa12.46□□□□□ -0.41
NECTIN4-201ENST00000368012 ZBTB1Q9Y2K1 713 aa12.46□□□□□ -0.41
NECTIN4-201ENST00000368012 MYO1CO00159 1063 aa12.46□□□□□ -0.42
NECTIN4-201ENST00000368012 TOB1P50616 345 aaPredicted RBP12.46□□□□□ -0.42
NECTIN4-201ENST00000368012 CTSWP56202 376 aa12.46□□□□□ -0.42
NECTIN4-201ENST00000368012 CYP27A1Q02318 531 aa12.46□□□□□ -0.42
NECTIN4-201ENST00000368012 ARID5AQ03989 594 aa12.46□□□□□ -0.42
NECTIN4-201ENST00000368012 FOXR1Q6PIV2 292 aa12.46□□□□□ -0.42
NECTIN4-201ENST00000368012 SRGAP1Q7Z6B7 1085 aa12.46□□□□□ -0.42
NECTIN4-201ENST00000368012 ZBTB38Q8NAP3 1195 aaPredicted RBP12.46□□□□□ -0.42
NECTIN4-201ENST00000368012 GPKOWQ92917 476 aaPredicted RBP eCLIP12.46□□□□□ -0.42
NECTIN4-201ENST00000368012 GPR108Q9NPR9 543 aa12.46□□□□□ -0.42
NECTIN4-201ENST00000368012 UQCRFS1P1P0C7P4 283 aa12.45□□□□□ -0.42
NECTIN4-201ENST00000368012 PLCD1P51178 756 aa12.45□□□□□ -0.42
NECTIN4-201ENST00000368012 SF3A3Q12874 501 aaKnown RBP eCLIP12.45□□□□□ -0.42
NECTIN4-201ENST00000368012 TTC38Q5R3I4 469 aa12.45□□□□□ -0.42
NECTIN4-201ENST00000368012 CCDC181Q5TID7 509 aa12.45□□□□□ -0.42
NECTIN4-201ENST00000368012 NELFBQ8WX92 580 aa12.45□□□□□ -0.42
NECTIN4-201ENST00000368012 RABGGTAQ92696 567 aa12.45□□□□□ -0.42
NECTIN4-201ENST00000368012 CHP1Q99653 195 aa12.45□□□□□ -0.42
NECTIN4-201ENST00000368012 BPIFA3Q9BQP9 254 aa12.45□□□□□ -0.42
NECTIN4-201ENST00000368012 CNNM2Q9H8M5 875 aa12.45□□□□□ -0.42
NECTIN4-201ENST00000368012 MRFAP1Q9Y605 127 aa12.45□□□□□ -0.42
NECTIN4-201ENST00000368012 ARHGAP23Q9P227 1491 aa12.45□□□□□ -0.42
NECTIN4-201ENST00000368012 H3BQF6 201 aa12.45□□□□□ -0.42
NECTIN4-201ENST00000368012 CD44P16070 742 aaKnown RBP12.45□□□□□ -0.42
NECTIN4-201ENST00000368012 CCDC96Q2M329 555 aa12.45□□□□□ -0.42
NECTIN4-201ENST00000368012 SMIM5Q71RC9 77 aa12.45□□□□□ -0.42
NECTIN4-201ENST00000368012 TEX13AQ9BXU3 409 aaPredicted RBP12.45□□□□□ -0.42
NECTIN4-201ENST00000368012 HSD3B7Q9H2F3 369 aa12.45□□□□□ -0.42
NECTIN4-201ENST00000368012 ADGRG1Q9Y653 693 aa12.45□□□□□ -0.42
NECTIN4-201ENST00000368012 KDM3BQ7LBC6 1761 aa12.45□□□□□ -0.42
NECTIN4-201ENST00000368012 MAGEB6P1A0A0J9YX57 407 aa12.45□□□□□ -0.42
NECTIN4-201ENST00000368012 PTPREP23469 700 aa12.45□□□□□ -0.42
NECTIN4-201ENST00000368012 VSNL1P62760 191 aa12.45□□□□□ -0.42
NECTIN4-201ENST00000368012 MAP3K9P80192 1104 aa12.45□□□□□ -0.42
NECTIN4-201ENST00000368012 CCDC93Q567U6 631 aa12.45□□□□□ -0.42
NECTIN4-201ENST00000368012 SPATA1Q5VX52 437 aa12.45□□□□□ -0.42
NECTIN4-201ENST00000368012 ENOX1Q8TC92 643 aaKnown RBP12.45□□□□□ -0.42
NECTIN4-201ENST00000368012 NOC3LQ8WTT2 800 aaKnown RBP12.45□□□□□ -0.42
NECTIN4-201ENST00000368012 PNKPQ96T60 521 aa12.45□□□□□ -0.42
NECTIN4-201ENST00000368012 RNF41Q9H4P4 317 aaPredicted RBP12.45□□□□□ -0.42
NECTIN4-201ENST00000368012 CDC23Q9UJX2 597 aa12.45□□□□□ -0.42
NECTIN4-201ENST00000368012 LUC7L2Q9Y383 392 aaKnown RBP12.45□□□□□ -0.42
NECTIN4-201ENST00000368012 CCDC194A0A1B0GVG4 234 aa12.44□□□□□ -0.42
NECTIN4-201ENST00000368012 WTIPA6NIX2 430 aaPredicted RBP12.44□□□□□ -0.42
NECTIN4-201ENST00000368012 CIAO1O76071 339 aa12.44□□□□□ -0.42
NECTIN4-201ENST00000368012 FMNL1O95466 1100 aaPredicted RBP12.44□□□□□ -0.42
NECTIN4-201ENST00000368012 TUBB4AP04350 444 aa12.44□□□□□ -0.42
NECTIN4-201ENST00000368012 CXCR5P32302 372 aa12.44□□□□□ -0.42
NECTIN4-201ENST00000368012 PUM3Q15397 648 aaKnown RBP12.44□□□□□ -0.42
NECTIN4-201ENST00000368012 CCDC70Q6NSX1 233 aa12.44□□□□□ -0.42
NECTIN4-201ENST00000368012 CNGA4Q8IV77 575 aa12.44□□□□□ -0.42
NECTIN4-201ENST00000368012 CRACR2BQ8N4Y2 399 aaPredicted RBP12.44□□□□□ -0.42
NECTIN4-201ENST00000368012 PAGE5Q96GU1 130 aa12.44□□□□□ -0.42
NECTIN4-201ENST00000368012 NBPF3Q9H094 633 aa12.44□□□□□ -0.42
NECTIN4-201ENST00000368012 EPB41L4AQ9HCS5 686 aaPredicted RBP12.44□□□□□ -0.42
NECTIN4-201ENST00000368012 MEGF6O75095 1541 aa12.44□□□□□ -0.42
NECTIN4-201ENST00000368012 PP2D1A8MPX8 630 aa12.44□□□□□ -0.42
NECTIN4-201ENST00000368012 USP17L12C9JPN9 530 aa12.44□□□□□ -0.42
NECTIN4-201ENST00000368012 USP17L21D6R901 530 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms