RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 GSTA2P09210 222 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 SKIP12755 728 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 PPFIBP2Q8ND30 876 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 THAP9Q9H5L6 903 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 TMEM51Q9NW97 253 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 STK36Q9NRP7 1315 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 CASP14P31944 242 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 CLCN2P51788 898 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 RWDD2AQ9UIY3 292 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 E7ENQ6 273 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 TTC6Q86TZ1 520 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 NDUFA13Q9P0J0 144 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 DISP1Q96F81 1524 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 PSMD7P51665 324 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 DTHD1Q6ZMT9 781 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 IQGAP3Q86VI3 1631 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 CCDC65Q8IXS2 484 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 SNRKQ9NRH2 765 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 PPFIA2O75334 1257 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 RASGRP2Q7LDG7 609 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 AIDAQ96BJ3 306 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 ZMYM6O95789 1325 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 TAF5LO75529 589 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 DAAM2Q86T65 1068 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 SAAL1Q96ER3 474 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 BSDC1Q9NW68 430 aaPredicted RBP4.57□□□□□ -1.68
SYNE2-204ENST00000358025 MKRN3Q13064 507 aaKnown RBP4.57□□□□□ -1.68
SYNE2-204ENST00000358025 TMED1Q13445 227 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 VSTM4Q8IW00 320 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 CDC37L1Q7L3B6 337 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 METTL14Q9HCE5 456 aaKnown RBP4.57□□□□□ -1.68
SYNE2-204ENST00000358025 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.57□□□□□ -1.68
SYNE2-204ENST00000358025 PTPDC1A2A3K4 754 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 PRPF6O94906 941 aaKnown RBP4.57□□□□□ -1.68
SYNE2-204ENST00000358025 TATP17735 454 aaPredicted RBP4.57□□□□□ -1.68
SYNE2-204ENST00000358025 ZBED6P86452 979 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 PPP1R14BQ96C90 147 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 TRIM47Q96LD4 638 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 ZRANB2O95218 330 aaKnown RBP eCLIP4.57□□□□□ -1.68
SYNE2-204ENST00000358025 SOGA3Q5TF21 947 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 PLBD2Q8NHP8 589 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 METTL22Q9BUU2 404 aaPredicted RBP4.57□□□□□ -1.68
SYNE2-204ENST00000358025 SEC63Q9UGP8 760 aaKnown RBP4.57□□□□□ -1.68
SYNE2-204ENST00000358025 KIAA0556O60303 1618 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 ATP2A2P16615 1042 aaKnown RBP4.57□□□□□ -1.68
SYNE2-204ENST00000358025 PKP1Q13835 747 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 TRIM42Q8IWZ5 723 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 NOP53Q9NZM5 478 aaKnown RBP4.57□□□□□ -1.68
SYNE2-204ENST00000358025 L1RE1Q9UN81 338 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 MAP2K7O14733 419 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 BYSLQ13895 437 aaKnown RBP4.57□□□□□ -1.68
SYNE2-204ENST00000358025 USP28Q96RU2 1077 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 IFIH1Q9BYX4 1025 aaKnown RBP4.57□□□□□ -1.68
SYNE2-204ENST00000358025 TOMM22Q9NS69 142 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 CTNNAL1Q9UBT7 734 aa4.57□□□□□ -1.68
SYNE2-204ENST00000358025 CDK12Q9NYV4 1490 aaPredicted RBP4.57□□□□□ -1.68
SYNE2-204ENST00000358025 CXorf56Q9H5V9 222 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 PLA2R1Q13018 1463 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 SLC5A1P13866 664 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 PDIA3P30101 505 aaKnown RBP4.56□□□□□ -1.68
SYNE2-204ENST00000358025 PAG1Q9NWQ8 432 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 ATP10DQ9P241 1426 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 PSMD14O00487 310 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 LRMPQ12912 555 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 ADAMTS12P58397 1594 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 STAT6P42226 847 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 ZBTB17Q13105 803 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 POLR2DO15514 142 aaKnown RBP4.56□□□□□ -1.68
SYNE2-204ENST00000358025 NOSTRINQ8IVI9 506 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 SGSM3Q96HU1 749 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 TMX1Q9H3N1 280 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 ATP6V0A4Q9HBG4 840 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 TXLNGQ9NUQ3 528 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 SENP1Q9P0U3 644 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 RTL9Q8NET4 1388 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 PTPREP23469 700 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 PLCD3Q8N3E9 789 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 LRRC10BA6NIK2 292 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 BIN1O00499 593 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 THAP12O43422 761 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 STAMBPO95630 424 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 RAB15P59190 212 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 EIF4A2Q14240 407 aaKnown RBP4.56□□□□□ -1.68
SYNE2-204ENST00000358025 RASEFQ8IZ41 740 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.56□□□□□ -1.68
SYNE2-204ENST00000358025 RNF113AO15541 343 aaKnown RBP4.56□□□□□ -1.68
SYNE2-204ENST00000358025 RESTQ13127 1097 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 MRPL40Q9NQ50 206 aaKnown RBP4.56□□□□□ -1.68
SYNE2-204ENST00000358025 MTMR7Q9Y216 660 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 CCDC194A0A1B0GVG4 234 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 SSU72P8A0A1W2PR75 194 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 LGALS16A8MUM7 142 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 CABP4P57796 275 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 UBL4BQ8N7F7 174 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 MSANTD4Q8NCY6 345 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 FAM192AQ9GZU8 254 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 ZRANB1Q9UGI0 708 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 SLC17A8Q8NDX2 589 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 SESTD1Q86VW0 696 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 IWS1Q96ST2 819 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms