RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 TRAPPC3LQ5T215 181 aa18.16■□□□□ 0.5
PHTF1-201ENST00000357783 USP49Q70CQ1 688 aa18.16■□□□□ 0.5
PHTF1-201ENST00000357783 CTCFLQ8NI51 663 aaPredicted RBP18.16■□□□□ 0.5
PHTF1-201ENST00000357783 OSBPL5Q9H0X9 879 aaPredicted RBP18.16■□□□□ 0.5
PHTF1-201ENST00000357783 CSRNP2Q9H175 543 aa18.16■□□□□ 0.5
PHTF1-201ENST00000357783 TSPY2A6NKD2 308 aa18.15■□□□□ 0.5
PHTF1-201ENST00000357783 USP17L8P0C7I0 530 aa18.15■□□□□ 0.5
PHTF1-201ENST00000357783 PRR29P0C7W0 189 aa18.15■□□□□ 0.5
PHTF1-201ENST00000357783 MDM2Q00987 491 aaPredicted RBP18.15■□□□□ 0.5
PHTF1-201ENST00000357783 NFIXQ14938 502 aa18.15■□□□□ 0.5
PHTF1-201ENST00000357783 POSTNQ15063 836 aa18.15■□□□□ 0.5
PHTF1-201ENST00000357783 FAM196AQ6ZSG2 479 aa18.15■□□□□ 0.5
PHTF1-201ENST00000357783 GRAMD1CQ8IYS0 662 aa18.15■□□□□ 0.5
PHTF1-201ENST00000357783 PDCL3Q9H2J4 239 aa18.15■□□□□ 0.5
PHTF1-201ENST00000357783 HOOK1Q9UJC3 728 aaKnown RBP18.15■□□□□ 0.5
PHTF1-201ENST00000357783 CNTNAP5Q8WYK1 1306 aa18.15■□□□□ 0.5
PHTF1-201ENST00000357783 BMP6P22004 513 aa18.15■□□□□ 0.5
PHTF1-201ENST00000357783 SRBD1Q8N5C6 995 aaKnown RBP18.15■□□□□ 0.5
PHTF1-201ENST00000357783 GPR101Q96P66 508 aaPredicted RBP18.15■□□□□ 0.5
PHTF1-201ENST00000357783 IMPACTQ9P2X3 320 aa18.15■□□□□ 0.5
PHTF1-201ENST00000357783 LY75O60449 1722 aa18.15■□□□□ 0.5
PHTF1-201ENST00000357783 PDE4BQ07343 736 aa18.14■□□□□ 0.5
PHTF1-201ENST00000357783 NOM1Q5C9Z4 860 aaKnown RBP18.14■□□□□ 0.5
PHTF1-201ENST00000357783 SPTY2D1Q68D10 685 aaPredicted RBP18.14■□□□□ 0.5
PHTF1-201ENST00000357783 CNBD1Q8NA66 436 aa18.14■□□□□ 0.5
PHTF1-201ENST00000357783 ZNF579Q8NAF0 562 aaKnown RBP18.14■□□□□ 0.5
PHTF1-201ENST00000357783 GRAPQ13588 217 aa18.14■□□□□ 0.49
PHTF1-201ENST00000357783 SBK1Q52WX2 424 aa18.14■□□□□ 0.49
PHTF1-201ENST00000357783 GRAPLQ8TC17 118 aaPredicted RBP18.14■□□□□ 0.49
PHTF1-201ENST00000357783 MAN1B1Q9UKM7 699 aa18.14■□□□□ 0.49
PHTF1-201ENST00000357783 WNT7AO00755 349 aa18.14■□□□□ 0.49
PHTF1-201ENST00000357783 LDHBP07195 334 aaKnown RBP18.14■□□□□ 0.49
PHTF1-201ENST00000357783 BRMS1Q9HCU9 246 aa18.14■□□□□ 0.49
PHTF1-201ENST00000357783 USP5P45974 858 aa18.13■□□□□ 0.49
PHTF1-201ENST00000357783 TRMT1Q9NXH9 659 aaKnown RBP18.13■□□□□ 0.49
PHTF1-201ENST00000357783 SERPINC1P01008 464 aa18.13■□□□□ 0.49
PHTF1-201ENST00000357783 DIXDC1Q155Q3 683 aa18.13■□□□□ 0.49
PHTF1-201ENST00000357783 ZNF827Q17R98 1081 aa18.13■□□□□ 0.49
PHTF1-201ENST00000357783 ARMCX5Q6P1M9 558 aa18.13■□□□□ 0.49
PHTF1-201ENST00000357783 DPF2Q92785 391 aa18.13■□□□□ 0.49
PHTF1-201ENST00000357783 ACTN4O43707 911 aaKnown RBP18.12■□□□□ 0.49
PHTF1-201ENST00000357783 NPY5RQ15761 445 aa18.12■□□□□ 0.49
PHTF1-201ENST00000357783 GRIK5Q16478 980 aa18.12■□□□□ 0.49
PHTF1-201ENST00000357783 ELOA2Q8IYF1 753 aaPredicted RBP18.12■□□□□ 0.49
PHTF1-201ENST00000357783 SH3RF3Q8TEJ3 882 aaPredicted RBP18.12■□□□□ 0.49
PHTF1-201ENST00000357783 DYNLL2Q96FJ2 89 aa18.12■□□□□ 0.49
PHTF1-201ENST00000357783 FANCLQ9NW38 375 aa18.12■□□□□ 0.49
PHTF1-201ENST00000357783 UBASH3AP57075 661 aa18.12■□□□□ 0.49
PHTF1-201ENST00000357783 ZNF174Q15697 407 aa18.12■□□□□ 0.49
PHTF1-201ENST00000357783 CCDC150Q8NCX0 1101 aa18.12■□□□□ 0.49
PHTF1-201ENST00000357783 WDR66Q8TBY9 1149 aa18.12■□□□□ 0.49
PHTF1-201ENST00000357783 ZNF592Q92610 1267 aa18.12■□□□□ 0.49
PHTF1-201ENST00000357783 SMARCE1Q969G3 411 aa18.12■□□□□ 0.49
PHTF1-201ENST00000357783 SFPQP23246 707 aaKnown RBP eCLIP18.11■□□□□ 0.49
PHTF1-201ENST00000357783 TFAP4Q01664 338 aa18.11■□□□□ 0.49
PHTF1-201ENST00000357783 RCSD1Q6JBY9 416 aa18.11■□□□□ 0.49
PHTF1-201ENST00000357783 DHX58Q96C10 678 aa18.11■□□□□ 0.49
PHTF1-201ENST00000357783 EPSTI1Q96J88 318 aa18.11■□□□□ 0.49
PHTF1-201ENST00000357783 LEMD3Q9Y2U8 911 aa18.11■□□□□ 0.49
PHTF1-201ENST00000357783 XDHP47989 1333 aa18.11■□□□□ 0.49
PHTF1-201ENST00000357783 CFAP100Q494V2 611 aa18.11■□□□□ 0.49
PHTF1-201ENST00000357783 HSP90AA4PQ58FG1 418 aa18.11■□□□□ 0.49
PHTF1-201ENST00000357783 TNFRSF25Q93038 417 aa18.11■□□□□ 0.49
PHTF1-201ENST00000357783 SCG2P13521 617 aa18.1■□□□□ 0.49
PHTF1-201ENST00000357783 VEGFAP15692 232 aaPredicted RBP18.1■□□□□ 0.49
PHTF1-201ENST00000357783 CCAR2Q8N163 923 aaKnown RBP18.1■□□□□ 0.49
PHTF1-201ENST00000357783 ZNF710Q8N1W2 664 aa18.1■□□□□ 0.49
PHTF1-201ENST00000357783 KAT14Q9H8E8 782 aa18.1■□□□□ 0.49
PHTF1-201ENST00000357783 A0A087X0B3 334 aa18.1■□□□□ 0.49
PHTF1-201ENST00000357783 PTPN21Q16825 1174 aa18.1■□□□□ 0.49
PHTF1-201ENST00000357783 TTC38Q5R3I4 469 aa18.1■□□□□ 0.49
PHTF1-201ENST00000357783 C12orf60Q5U649 245 aa18.1■□□□□ 0.49
PHTF1-201ENST00000357783 CEP135Q66GS9 1140 aa18.1■□□□□ 0.49
PHTF1-201ENST00000357783 LRRC4BQ9NT99 713 aa18.1■□□□□ 0.49
PHTF1-201ENST00000357783 NLRP5P59047 1200 aa18.09■□□□□ 0.49
PHTF1-201ENST00000357783 NT5DC1Q5TFE4 455 aa18.09■□□□□ 0.49
PHTF1-201ENST00000357783 PRR5LQ6MZQ0 368 aa18.09■□□□□ 0.49
PHTF1-201ENST00000357783 TMED8Q6PL24 325 aaPredicted RBP18.09■□□□□ 0.49
PHTF1-201ENST00000357783 ZNF804AQ7Z570 1209 aa18.09■□□□□ 0.49
PHTF1-201ENST00000357783 SYMPKQ92797 1274 aaKnown RBP18.09■□□□□ 0.49
PHTF1-201ENST00000357783 MAP7D2Q96T17 732 aa18.09■□□□□ 0.49
PHTF1-201ENST00000357783 MKRN1Q9UHC7 482 aaKnown RBP18.09■□□□□ 0.49
PHTF1-201ENST00000357783 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.09■□□□□ 0.49
PHTF1-201ENST00000357783 CBFA2T2O43439 604 aa18.09■□□□□ 0.49
PHTF1-201ENST00000357783 SARSP49591 514 aaKnown RBP18.09■□□□□ 0.49
PHTF1-201ENST00000357783 FMR1Q06787 632 aaKnown RBP eCLIP18.09■□□□□ 0.49
PHTF1-201ENST00000357783 RPGRQ92834 1020 aaKnown RBP18.09■□□□□ 0.49
PHTF1-201ENST00000357783 IL17RBQ9NRM6 502 aa18.09■□□□□ 0.49
PHTF1-201ENST00000357783 ADAMTS3O15072 1205 aa18.08■□□□□ 0.49
PHTF1-201ENST00000357783 GPSM2P81274 684 aa18.08■□□□□ 0.49
PHTF1-201ENST00000357783 MORC3Q14149 939 aa18.08■□□□□ 0.49
PHTF1-201ENST00000357783 PTPN14Q15678 1187 aa18.08■□□□□ 0.49
PHTF1-201ENST00000357783 PFKFB3Q16875 520 aaPredicted RBP18.08■□□□□ 0.49
PHTF1-201ENST00000357783 KANK3Q6NY19 840 aa18.08■□□□□ 0.49
PHTF1-201ENST00000357783 PIK3AP1Q6ZUJ8 805 aa18.08■□□□□ 0.49
PHTF1-201ENST00000357783 TRMT44Q8IYL2 757 aaKnown RBP18.08■□□□□ 0.49
PHTF1-201ENST00000357783 TGFBRAP1Q8WUH2 860 aa18.08■□□□□ 0.49
PHTF1-201ENST00000357783 GJD4Q96KN9 370 aaPredicted RBP18.08■□□□□ 0.49
PHTF1-201ENST00000357783 ARID3AQ99856 593 aa18.08■□□□□ 0.49
PHTF1-201ENST00000357783 TMEM232C9JQI7 657 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms