RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 FDPSP14324 419 aaKnown RBP9.92□□□□□ -0.82
TRIM55-204ENST00000353317 PRELPP51888 382 aa9.92□□□□□ -0.82
TRIM55-204ENST00000353317 FSIP1Q8NA03 581 aa9.92□□□□□ -0.82
TRIM55-204ENST00000353317 NLGN2Q8NFZ4 835 aa9.92□□□□□ -0.82
TRIM55-204ENST00000353317 TBC1D22AQ8WUA7 517 aa9.92□□□□□ -0.82
TRIM55-204ENST00000353317 EYA3Q99504 573 aa9.92□□□□□ -0.82
TRIM55-204ENST00000353317 TOMM22Q9NS69 142 aa9.92□□□□□ -0.82
TRIM55-204ENST00000353317 ATP8A2Q9NTI2 1148 aa9.92□□□□□ -0.82
TRIM55-204ENST00000353317 ANO10Q9NW15 660 aa9.92□□□□□ -0.82
TRIM55-204ENST00000353317 NAP1L2Q9ULW6 460 aaPredicted RBP9.92□□□□□ -0.82
TRIM55-204ENST00000353317 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.92□□□□□ -0.82
TRIM55-204ENST00000353317 PPIP5K2O43314 1243 aa9.91□□□□□ -0.82
TRIM55-204ENST00000353317 CDC27P30260 824 aa9.91□□□□□ -0.82
TRIM55-204ENST00000353317 PTPN14Q15678 1187 aa9.91□□□□□ -0.82
TRIM55-204ENST00000353317 FAM47AQ5JRC9 791 aa9.91□□□□□ -0.82
TRIM55-204ENST00000353317 C12orf60Q5U649 245 aa9.91□□□□□ -0.82
TRIM55-204ENST00000353317 APOBEC3HQ6NTF7 200 aaKnown RBP9.91□□□□□ -0.82
TRIM55-204ENST00000353317 AOPEPQ8N6M6 819 aa9.91□□□□□ -0.82
TRIM55-204ENST00000353317 ZNF274Q96GC6 653 aaPredicted RBP9.91□□□□□ -0.82
TRIM55-204ENST00000353317 ZNF396Q96N95 335 aaPredicted RBP9.91□□□□□ -0.82
TRIM55-204ENST00000353317 TMX4Q9H1E5 349 aaPredicted RBP9.91□□□□□ -0.82
TRIM55-204ENST00000353317 FAM217BQ9NTX9 383 aaPredicted RBP9.91□□□□□ -0.82
TRIM55-204ENST00000353317 TRMT1Q9NXH9 659 aaKnown RBP9.91□□□□□ -0.82
TRIM55-204ENST00000353317 OGFRQ9NZT2 677 aa9.91□□□□□ -0.82
TRIM55-204ENST00000353317 PCDHA7Q9UN72 937 aa9.91□□□□□ -0.82
TRIM55-204ENST00000353317 IGSF3O75054 1194 aa9.91□□□□□ -0.82
TRIM55-204ENST00000353317 TRDNQ13061 729 aa9.91□□□□□ -0.82
TRIM55-204ENST00000353317 ATL3Q6DD88 541 aa9.91□□□□□ -0.82
TRIM55-204ENST00000353317 ZFPM1Q8IX07 1006 aa9.91□□□□□ -0.82
TRIM55-204ENST00000353317 FMR1NBQ8N0W7 255 aaPredicted RBP9.91□□□□□ -0.82
TRIM55-204ENST00000353317 ANGEL1Q9UNK9 670 aaKnown RBP9.91□□□□□ -0.82
TRIM55-204ENST00000353317 A0A1B0GVL5 298 aa9.9□□□□□ -0.82
TRIM55-204ENST00000353317 G3V3G9 751 aa9.9□□□□□ -0.82
TRIM55-204ENST00000353317 WDHD1O75717 1129 aaPredicted RBP9.9□□□□□ -0.82
TRIM55-204ENST00000353317 USP5P45974 858 aa9.9□□□□□ -0.82
TRIM55-204ENST00000353317 CACNB3P54284 484 aa9.9□□□□□ -0.82
TRIM55-204ENST00000353317 TGFB2P61812 414 aa9.9□□□□□ -0.82
TRIM55-204ENST00000353317 GSTO1P78417 241 aa9.9□□□□□ -0.82
TRIM55-204ENST00000353317 NFIAQ12857 509 aa9.9□□□□□ -0.82
TRIM55-204ENST00000353317 SEC23AQ15436 765 aa9.9□□□□□ -0.82
TRIM55-204ENST00000353317 SBK1Q52WX2 424 aa9.9□□□□□ -0.82
TRIM55-204ENST00000353317 DCAF8Q5TAQ9 597 aa9.9□□□□□ -0.82
TRIM55-204ENST00000353317 STRIP1Q5VSL9 837 aa9.9□□□□□ -0.82
TRIM55-204ENST00000353317 NBPF11Q86T75 865 aa9.9□□□□□ -0.82
TRIM55-204ENST00000353317 CEP57L1Q8IYX8 460 aa9.9□□□□□ -0.82
TRIM55-204ENST00000353317 GJB4Q9NTQ9 266 aa9.9□□□□□ -0.82
TRIM55-204ENST00000353317 PIM2Q9P1W9 311 aa9.9□□□□□ -0.82
TRIM55-204ENST00000353317 CGNQ9P2M7 1197 aaKnown RBP9.9□□□□□ -0.82
TRIM55-204ENST00000353317 ZNF215Q9UL58 517 aaPredicted RBP9.9□□□□□ -0.82
TRIM55-204ENST00000353317 FLT1P17948 1338 aa9.9□□□□□ -0.82
TRIM55-204ENST00000353317 WDR19Q8NEZ3 1342 aa9.9□□□□□ -0.82
TRIM55-204ENST00000353317 RAD17O75943 681 aa9.9□□□□□ -0.82
TRIM55-204ENST00000353317 LDHCP07864 332 aa9.9□□□□□ -0.82
TRIM55-204ENST00000353317 CCDC93Q567U6 631 aa9.9□□□□□ -0.82
TRIM55-204ENST00000353317 TMEM67Q5HYA8 995 aa9.9□□□□□ -0.82
TRIM55-204ENST00000353317 CDC42EP5Q6NZY7 148 aa9.9□□□□□ -0.82
TRIM55-204ENST00000353317 APOA5Q6Q788 366 aa9.9□□□□□ -0.82
TRIM55-204ENST00000353317 TEX11Q8IYF3 940 aa9.9□□□□□ -0.82
TRIM55-204ENST00000353317 CCAR2Q8N163 923 aaKnown RBP9.9□□□□□ -0.82
TRIM55-204ENST00000353317 DDX41Q9UJV9 622 aaKnown RBP9.9□□□□□ -0.82
TRIM55-204ENST00000353317 USP17L3A6NCW0 530 aa9.89□□□□□ -0.83
TRIM55-204ENST00000353317 USP17L4A6NCW7 530 aa9.89□□□□□ -0.83
TRIM55-204ENST00000353317 NFKBIEO00221 500 aa9.89□□□□□ -0.83
TRIM55-204ENST00000353317 IFIT3O14879 490 aaKnown RBP9.89□□□□□ -0.83
TRIM55-204ENST00000353317 BAG3O95817 575 aa9.89□□□□□ -0.83
TRIM55-204ENST00000353317 POLD1P28340 1107 aa9.89□□□□□ -0.83
TRIM55-204ENST00000353317 NDUFA8P51970 172 aa9.89□□□□□ -0.83
TRIM55-204ENST00000353317 ADALQ6DHV7 355 aa9.89□□□□□ -0.83
TRIM55-204ENST00000353317 OTUD7BQ6GQQ9 843 aa9.89□□□□□ -0.83
TRIM55-204ENST00000353317 ILDR2Q71H61 639 aa9.89□□□□□ -0.83
TRIM55-204ENST00000353317 USP17L1Q7RTZ2 530 aa9.89□□□□□ -0.83
TRIM55-204ENST00000353317 MRPS27Q92552 414 aaKnown RBP9.89□□□□□ -0.83
TRIM55-204ENST00000353317 PSMD1Q99460 953 aa9.89□□□□□ -0.83
TRIM55-204ENST00000353317 SDF4Q9BRK5 362 aa9.89□□□□□ -0.83
TRIM55-204ENST00000353317 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.89□□□□□ -0.83
TRIM55-204ENST00000353317 ZBTB12Q9Y330 459 aaPredicted RBP9.89□□□□□ -0.83
TRIM55-204ENST00000353317 V9GYY5 206 aaPredicted RBP9.89□□□□□ -0.83
TRIM55-204ENST00000353317 MYH15Q9Y2K3 1946 aa9.89□□□□□ -0.83
TRIM55-204ENST00000353317 GOLGA8BA8MQT2 603 aa9.89□□□□□ -0.83
TRIM55-204ENST00000353317 RANBP6O60518 1105 aaKnown RBP9.89□□□□□ -0.83
TRIM55-204ENST00000353317 KIF20AO95235 890 aa9.89□□□□□ -0.83
TRIM55-204ENST00000353317 CRKP46108 304 aa9.89□□□□□ -0.83
TRIM55-204ENST00000353317 PICALMQ13492 652 aa9.89□□□□□ -0.83
TRIM55-204ENST00000353317 DPCR1Q3MIW9 517 aa9.89□□□□□ -0.83
TRIM55-204ENST00000353317 CC2D2BQ6DHV5 1058 aa9.89□□□□□ -0.83
TRIM55-204ENST00000353317 SGMS1Q86VZ5 419 aa9.89□□□□□ -0.83
TRIM55-204ENST00000353317 CMTR1Q8N1G2 835 aaKnown RBP9.89□□□□□ -0.83
TRIM55-204ENST00000353317 ENAHQ8N8S7 591 aaPredicted RBP9.89□□□□□ -0.83
TRIM55-204ENST00000353317 LINC00301Q8NCQ3 95 aa9.89□□□□□ -0.83
TRIM55-204ENST00000353317 AIFM3Q96NN9 605 aa9.89□□□□□ -0.83
TRIM55-204ENST00000353317 KRT23Q9C075 422 aa9.89□□□□□ -0.83
TRIM55-204ENST00000353317 NAT10Q9H0A0 1025 aaKnown RBP9.89□□□□□ -0.83
TRIM55-204ENST00000353317 RTEL1Q9NZ71 1219 aa9.89□□□□□ -0.83
TRIM55-204ENST00000353317 SIPA1L1O43166 1804 aa9.89□□□□□ -0.83
TRIM55-204ENST00000353317 SHTN1A0MZ66 631 aa9.88□□□□□ -0.83
TRIM55-204ENST00000353317 KMT5BQ4FZB7 885 aa9.88□□□□□ -0.83
TRIM55-204ENST00000353317 MICU3Q86XE3 530 aa9.88□□□□□ -0.83
TRIM55-204ENST00000353317 RTKN2Q8IZC4 609 aa9.88□□□□□ -0.83
TRIM55-204ENST00000353317 KIF18AQ8NI77 898 aa9.88□□□□□ -0.83
TRIM55-204ENST00000353317 CNNM2Q9H8M5 875 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms