RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 GH2P01242 217 aa31.75■■■□□ 2.67
SSBP4-202ENST00000348495 KLF18A0A0U1RQI7 1052 aa31.75■■■□□ 2.67
SSBP4-202ENST00000348495 ZBTB21Q9ULJ3 1066 aa31.75■■■□□ 2.67
SSBP4-202ENST00000348495 PDIA3P30101 505 aaKnown RBP31.74■■■□□ 2.67
SSBP4-202ENST00000348495 APOA5Q6Q788 366 aa31.74■■■□□ 2.67
SSBP4-202ENST00000348495 IPO9Q96P70 1041 aaKnown RBP31.74■■■□□ 2.67
SSBP4-202ENST00000348495 KANSL2Q9H9L4 492 aa31.74■■■□□ 2.67
SSBP4-202ENST00000348495 CABP5Q9NP86 173 aa31.74■■■□□ 2.67
SSBP4-202ENST00000348495 SH2B1Q9NRF2 756 aaPredicted RBP31.74■■■□□ 2.67
SSBP4-202ENST00000348495 CTNND1O60716 968 aaKnown RBP31.73■■■□□ 2.67
SSBP4-202ENST00000348495 SEPT2Q15019 361 aa31.73■■■□□ 2.67
SSBP4-202ENST00000348495 NFXL1Q6ZNB6 911 aa31.73■■■□□ 2.67
SSBP4-202ENST00000348495 KLRG1Q96E93 195 aa31.73■■■□□ 2.67
SSBP4-202ENST00000348495 STX8Q9UNK0 236 aa31.73■■■□□ 2.67
SSBP4-202ENST00000348495 CCDC69A6NI79 296 aa31.72■■■□□ 2.67
SSBP4-202ENST00000348495 CLEC10AQ8IUN9 316 aa31.72■■■□□ 2.67
SSBP4-202ENST00000348495 GINM1Q9NU53 330 aa31.72■■■□□ 2.67
SSBP4-202ENST00000348495 FZD1Q9UP38 647 aa31.72■■■□□ 2.67
SSBP4-202ENST00000348495 HPS5Q9UPZ3 1129 aa31.72■■■□□ 2.67
SSBP4-202ENST00000348495 USP2O75604 605 aaPredicted RBP31.72■■■□□ 2.67
SSBP4-202ENST00000348495 PPP4R3BQ5MIZ7 849 aa31.72■■■□□ 2.67
SSBP4-202ENST00000348495 TMEM47Q9BQJ4 181 aa31.72■■■□□ 2.67
SSBP4-202ENST00000348495 SLC12A7Q9Y666 1083 aa31.72■■■□□ 2.67
SSBP4-202ENST00000348495 ATAD5Q96QE3 1844 aa31.72■■■□□ 2.67
SSBP4-202ENST00000348495 PAPPA2Q9BXP8 1791 aa31.71■■■□□ 2.67
SSBP4-202ENST00000348495 PFKFB2O60825 505 aa31.71■■■□□ 2.67
SSBP4-202ENST00000348495 TTLL1O95922 423 aa31.71■■■□□ 2.67
SSBP4-202ENST00000348495 INPP5BP32019 993 aa31.71■■■□□ 2.67
SSBP4-202ENST00000348495 ST3GAL1Q11201 340 aa31.71■■■□□ 2.67
SSBP4-202ENST00000348495 CUL4AQ13619 759 aa31.71■■■□□ 2.67
SSBP4-202ENST00000348495 SIAH1Q8IUQ4 282 aa31.71■■■□□ 2.67
SSBP4-202ENST00000348495 ASNSP08243 561 aa31.7■■■□□ 2.67
SSBP4-202ENST00000348495 RCAN1P53805 252 aa31.7■■■□□ 2.67
SSBP4-202ENST00000348495 ZNF654Q8IZM8 581 aa31.7■■■□□ 2.67
SSBP4-202ENST00000348495 WRNIP1Q96S55 665 aa31.7■■■□□ 2.67
SSBP4-202ENST00000348495 GPBP1L1Q9HC44 474 aaPredicted RBP31.7■■■□□ 2.67
SSBP4-202ENST00000348495 NYAP2Q9P242 653 aa31.7■■■□□ 2.67
SSBP4-202ENST00000348495 GOLGA8BA8MQT2 603 aa31.69■■■□□ 2.66
SSBP4-202ENST00000348495 TOP1P11387 765 aaKnown RBP31.69■■■□□ 2.66
SSBP4-202ENST00000348495 NF2P35240 595 aa31.69■■■□□ 2.66
SSBP4-202ENST00000348495 DDX55Q8NHQ9 600 aaKnown RBP eCLIP31.69■■■□□ 2.665e-8■■■■■ 57.5
SSBP4-202ENST00000348495 TRAF5O00463 557 aa31.69■■■□□ 2.66
SSBP4-202ENST00000348495 SLC4A3P48751 1232 aa31.69■■■□□ 2.66
SSBP4-202ENST00000348495 ICA1Q05084 483 aa31.69■■■□□ 2.66
SSBP4-202ENST00000348495 TROAPQ12815 778 aa31.69■■■□□ 2.66
SSBP4-202ENST00000348495 RAB3GAP1Q15042 981 aa31.69■■■□□ 2.66
SSBP4-202ENST00000348495 MKL1Q969V6 931 aa31.69■■■□□ 2.66
SSBP4-202ENST00000348495 KAT14Q9H8E8 782 aa31.69■■■□□ 2.66
SSBP4-202ENST00000348495 NID2Q14112 1375 aa31.68■■■□□ 2.66
SSBP4-202ENST00000348495 DOCK1Q14185 1865 aa31.68■■■□□ 2.66
SSBP4-202ENST00000348495 ZBTB43O43298 467 aa31.68■■■□□ 2.66
SSBP4-202ENST00000348495 PPP1R12BO60237 982 aaPredicted RBP31.68■■■□□ 2.66
SSBP4-202ENST00000348495 NECAB1Q8N987 351 aa31.68■■■□□ 2.66
SSBP4-202ENST00000348495 GTF3C6Q969F1 213 aa31.68■■■□□ 2.66
SSBP4-202ENST00000348495 EEF2P13639 858 aaKnown RBP31.67■■■□□ 2.66
SSBP4-202ENST00000348495 STK3Q13188 491 aa31.67■■■□□ 2.66
SSBP4-202ENST00000348495 CHADLQ6NUI6 762 aa31.67■■■□□ 2.66
SSBP4-202ENST00000348495 CATIPQ7Z7H3 387 aa31.67■■■□□ 2.66
SSBP4-202ENST00000348495 PNMA1Q8ND90 353 aa31.67■■■□□ 2.66
SSBP4-202ENST00000348495 MYL10Q9BUA6 226 aa31.67■■■□□ 2.66
SSBP4-202ENST00000348495 SLKQ9H2G2 1235 aaPredicted RBP31.67■■■□□ 2.66
SSBP4-202ENST00000348495 CLIP2Q9UDT6 1046 aa31.67■■■□□ 2.66
SSBP4-202ENST00000348495 DDAH1O94760 285 aa31.66■■■□□ 2.66
SSBP4-202ENST00000348495 SCRN1Q12765 414 aa31.66■■■□□ 2.66
SSBP4-202ENST00000348495 MAP3K11Q16584 847 aa31.66■■■□□ 2.66
SSBP4-202ENST00000348495 NOL9Q5SY16 702 aaKnown RBP31.66■■■□□ 2.66
SSBP4-202ENST00000348495 SYNE3Q6ZMZ3 975 aa31.66■■■□□ 2.66
SSBP4-202ENST00000348495 SCYL3Q8IZE3 742 aa31.66■■■□□ 2.66
SSBP4-202ENST00000348495 FRMD4AQ9P2Q2 1039 aaPredicted RBP31.66■■■□□ 2.66
SSBP4-202ENST00000348495 NAP1L2Q9ULW6 460 aaPredicted RBP31.66■■■□□ 2.66
SSBP4-202ENST00000348495 PRKG1Q13976 671 aa31.66■■■□□ 2.66
SSBP4-202ENST00000348495 MICU3Q86XE3 530 aa31.66■■■□□ 2.66
SSBP4-202ENST00000348495 RAB11FIP4Q86YS3 637 aa31.66■■■□□ 2.66
SSBP4-202ENST00000348495 ZKSCAN4Q969J2 545 aaPredicted RBP31.66■■■□□ 2.66
SSBP4-202ENST00000348495 MYH4Q9Y623 1939 aa31.65■■■□□ 2.66
SSBP4-202ENST00000348495 FMR1Q06787 632 aaKnown RBP eCLIP31.65■■■□□ 2.66
SSBP4-202ENST00000348495 OTOFQ9HC10 1997 aa31.65■■■□□ 2.66
SSBP4-202ENST00000348495 KIF3CO14782 793 aa31.64■■■□□ 2.66
SSBP4-202ENST00000348495 ITGBL1O95965 494 aaPredicted RBP31.64■■■□□ 2.66
SSBP4-202ENST00000348495 RXRAP19793 462 aa31.64■■■□□ 2.66
SSBP4-202ENST00000348495 PPP1R3FQ6ZSY5 799 aaPredicted RBP31.64■■■□□ 2.66
SSBP4-202ENST00000348495 CALM1P0DP23 149 aa31.63■■■□□ 2.65
SSBP4-202ENST00000348495 CALM2P0DP24 149 aa31.63■■■□□ 2.65
SSBP4-202ENST00000348495 CALM3P0DP25 149 aa31.63■■■□□ 2.65
SSBP4-202ENST00000348495 METAP2P50579 478 aaKnown RBP eCLIP31.63■■■□□ 2.657e-7■■■□□ 17.5
SSBP4-202ENST00000348495 CCT2P78371 535 aaKnown RBP31.63■■■□□ 2.65
SSBP4-202ENST00000348495 CCDC83Q8IWF9 413 aa31.63■■■□□ 2.65
SSBP4-202ENST00000348495 LRRC47Q8N1G4 583 aaKnown RBP31.63■■■□□ 2.65
SSBP4-202ENST00000348495 FAM217BQ9NTX9 383 aaPredicted RBP31.63■■■□□ 2.65
SSBP4-202ENST00000348495 SYNPO2Q9UMS6 1093 aa31.63■■■□□ 2.65
SSBP4-202ENST00000348495 IREB2P48200 963 aaKnown RBP31.63■■■□□ 2.65
SSBP4-202ENST00000348495 MAP3K9P80192 1104 aa31.63■■■□□ 2.65
SSBP4-202ENST00000348495 FANCBQ8NB91 859 aa31.63■■■□□ 2.65
SSBP4-202ENST00000348495 INTS4Q96HW7 963 aaKnown RBP31.63■■■□□ 2.65
SSBP4-202ENST00000348495 MAP3K14Q99558 947 aa31.63■■■□□ 2.65
SSBP4-202ENST00000348495 NCOA5Q9HCD5 579 aaKnown RBP31.63■■■□□ 2.65
SSBP4-202ENST00000348495 A0A1W2PRG0 241 aa31.62■■■□□ 2.65
SSBP4-202ENST00000348495 ATP2B2Q01814 1243 aa31.62■■■□□ 2.65
SSBP4-202ENST00000348495 NUP133Q8WUM0 1156 aa31.62■■■□□ 2.65
SSBP4-202ENST00000348495 GOLGA8AA7E2F4 631 aa31.61■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms