RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 TSPYL1Q9H0U9 437 aa12.18□□□□□ -0.46
CLCN6-202ENST00000346436 PCDHA7Q9UN72 937 aa12.18□□□□□ -0.46
CLCN6-202ENST00000346436 ANGEL1Q9UNK9 670 aaKnown RBP12.18□□□□□ -0.46
CLCN6-202ENST00000346436 TRIM75PA6NK02 468 aa12.18□□□□□ -0.46
CLCN6-202ENST00000346436 PHKG2P15735 406 aa12.18□□□□□ -0.46
CLCN6-202ENST00000346436 IL6STP40189 918 aaPredicted RBP12.18□□□□□ -0.46
CLCN6-202ENST00000346436 NDUFA8P51970 172 aa12.18□□□□□ -0.46
CLCN6-202ENST00000346436 KIAA0825Q8IV33 1275 aa12.18□□□□□ -0.46
CLCN6-202ENST00000346436 TRIM47Q96LD4 638 aa12.18□□□□□ -0.46
CLCN6-202ENST00000346436 OGFRQ9NZT2 677 aa12.18□□□□□ -0.46
CLCN6-202ENST00000346436 ADD3Q9UEY8 706 aaKnown RBP12.18□□□□□ -0.46
CLCN6-202ENST00000346436 ADORA1P30542 326 aa12.18□□□□□ -0.46
CLCN6-202ENST00000346436 NECTIN1Q15223 517 aa12.18□□□□□ -0.46
CLCN6-202ENST00000346436 TAF3Q5VWG9 929 aa12.18□□□□□ -0.46
CLCN6-202ENST00000346436 SREK1Q8WXA9 508 aaKnown RBP12.18□□□□□ -0.46
CLCN6-202ENST00000346436 HAUS7Q99871 368 aa12.18□□□□□ -0.46
CLCN6-202ENST00000346436 ZBTB7AO95365 584 aa12.18□□□□□ -0.46
CLCN6-202ENST00000346436 RHOXF2BP0C7M4 288 aa12.18□□□□□ -0.46
CLCN6-202ENST00000346436 GOLGA8FQ08AF8 430 aa12.18□□□□□ -0.46
CLCN6-202ENST00000346436 GOLGA8DPQ0D2H9 430 aa12.18□□□□□ -0.46
CLCN6-202ENST00000346436 DPH6Q7L8W6 267 aa12.18□□□□□ -0.46
CLCN6-202ENST00000346436 GJD4Q96KN9 370 aaPredicted RBP12.18□□□□□ -0.46
CLCN6-202ENST00000346436 RHOXF2Q9BQY4 288 aa12.18□□□□□ -0.46
CLCN6-202ENST00000346436 CRKLP46109 303 aaKnown RBP12.17□□□□□ -0.46
CLCN6-202ENST00000346436 GPIHBP1Q8IV16 184 aa12.17□□□□□ -0.46
CLCN6-202ENST00000346436 SPAG5Q96R06 1193 aa12.17□□□□□ -0.46
CLCN6-202ENST00000346436 BAG1Q99933 345 aaPredicted RBP12.17□□□□□ -0.46
CLCN6-202ENST00000346436 ZBED2Q9BTP6 218 aa12.17□□□□□ -0.46
CLCN6-202ENST00000346436 VWA3AA6NCI4 1184 aa12.17□□□□□ -0.46
CLCN6-202ENST00000346436 PFKFB2O60825 505 aa12.17□□□□□ -0.46
CLCN6-202ENST00000346436 MMP10P09238 476 aa12.17□□□□□ -0.46
CLCN6-202ENST00000346436 TRPC3Q13507 836 aa12.17□□□□□ -0.46
CLCN6-202ENST00000346436 EPHA10Q5JZY3 1008 aa12.17□□□□□ -0.46
CLCN6-202ENST00000346436 PI16Q6UXB8 463 aa12.17□□□□□ -0.46
CLCN6-202ENST00000346436 PPP2R3CQ969Q6 453 aa12.17□□□□□ -0.46
CLCN6-202ENST00000346436 CLIC6Q96NY7 704 aa12.17□□□□□ -0.46
CLCN6-202ENST00000346436 NOX5Q96PH1 765 aa12.17□□□□□ -0.46
CLCN6-202ENST00000346436 CARD6Q9BX69 1037 aa12.17□□□□□ -0.46
CLCN6-202ENST00000346436 JADE2Q9NQC1 790 aa12.17□□□□□ -0.46
CLCN6-202ENST00000346436 GAS8O95995 478 aa12.17□□□□□ -0.46
CLCN6-202ENST00000346436 CYP2E1P05181 493 aaPredicted RBP12.17□□□□□ -0.46
CLCN6-202ENST00000346436 RPL13P26373 211 aaKnown RBP12.17□□□□□ -0.46
CLCN6-202ENST00000346436 ARID5AQ03989 594 aa12.17□□□□□ -0.46
CLCN6-202ENST00000346436 WDR44Q5JSH3 913 aa12.17□□□□□ -0.46
CLCN6-202ENST00000346436 ZNF569Q5MCW4 686 aa12.17□□□□□ -0.46
CLCN6-202ENST00000346436 SMAP1Q8IYB5 467 aaPredicted RBP12.17□□□□□ -0.46
CLCN6-202ENST00000346436 OTUD6BQ8N6M0 293 aa12.17□□□□□ -0.46
CLCN6-202ENST00000346436 RNF34Q969K3 372 aa12.17□□□□□ -0.46
CLCN6-202ENST00000346436 A2ML1A8K2U0 1454 aa12.17□□□□□ -0.46
CLCN6-202ENST00000346436 ZNF532Q9HCE3 1301 aa12.17□□□□□ -0.46
CLCN6-202ENST00000346436 PFKFB1P16118 471 aa12.17□□□□□ -0.46
CLCN6-202ENST00000346436 FERP16591 822 aa12.17□□□□□ -0.46
CLCN6-202ENST00000346436 KRT2P35908 639 aa12.17□□□□□ -0.46
CLCN6-202ENST00000346436 PRPHP41219 470 aa12.17□□□□□ -0.46
CLCN6-202ENST00000346436 ARID5BQ14865 1188 aa12.17□□□□□ -0.46
CLCN6-202ENST00000346436 ARFGAP3Q9NP61 516 aa12.17□□□□□ -0.46
CLCN6-202ENST00000346436 MRPL11Q9Y3B7 192 aaKnown RBP12.17□□□□□ -0.46
CLCN6-202ENST00000346436 MYO3BQ8WXR4 1341 aa12.17□□□□□ -0.46
CLCN6-202ENST00000346436 PDIA3P30101 505 aaKnown RBP12.16□□□□□ -0.46
CLCN6-202ENST00000346436 DOK7Q18PE1 504 aa12.16□□□□□ -0.46
CLCN6-202ENST00000346436 LONRF3Q496Y0 759 aa12.16□□□□□ -0.46
CLCN6-202ENST00000346436 MYSM1Q5VVJ2 828 aa12.16□□□□□ -0.46
CLCN6-202ENST00000346436 DIS3L2Q8IYB7 885 aaKnown RBP12.16□□□□□ -0.46
CLCN6-202ENST00000346436 CACTINQ8WUQ7 758 aaKnown RBP12.16□□□□□ -0.46
CLCN6-202ENST00000346436 PKD2L1Q9P0L9 805 aa12.16□□□□□ -0.46
CLCN6-202ENST00000346436 NLRP12P59046 1061 aa12.16□□□□□ -0.46
CLCN6-202ENST00000346436 ZNF827Q17R98 1081 aa12.16□□□□□ -0.46
CLCN6-202ENST00000346436 OTUD6AQ7L8S5 288 aa12.16□□□□□ -0.46
CLCN6-202ENST00000346436 TAX1BP1Q86VP1 789 aa12.16□□□□□ -0.46
CLCN6-202ENST00000346436 LRRC8AQ8IWT6 810 aa12.16□□□□□ -0.46
CLCN6-202ENST00000346436 CAPZA3Q96KX2 299 aa12.16□□□□□ -0.46
CLCN6-202ENST00000346436 DSCC1Q9BVC3 393 aa12.16□□□□□ -0.46
CLCN6-202ENST00000346436 ZNF215Q9UL58 517 aaPredicted RBP12.16□□□□□ -0.46
CLCN6-202ENST00000346436 GOLGA6L9A6NEM1 432 aa12.16□□□□□ -0.46
CLCN6-202ENST00000346436 CHGBP05060 677 aa12.16□□□□□ -0.46
CLCN6-202ENST00000346436 EVCP57679 992 aa12.16□□□□□ -0.46
CLCN6-202ENST00000346436 MMRN2Q9H8L6 949 aa12.16□□□□□ -0.46
CLCN6-202ENST00000346436 TRPC6Q9Y210 931 aa12.16□□□□□ -0.46
CLCN6-202ENST00000346436 CAMSAP1Q5T5Y3 1602 aa12.16□□□□□ -0.46
CLCN6-202ENST00000346436 FGAP02671 866 aa12.16□□□□□ -0.46
CLCN6-202ENST00000346436 CCDC175P0C221 793 aa12.16□□□□□ -0.46
CLCN6-202ENST00000346436 MTX1Q13505 466 aa12.16□□□□□ -0.46
CLCN6-202ENST00000346436 ERO1AQ96HE7 468 aa12.16□□□□□ -0.46
CLCN6-202ENST00000346436 ADPGKQ9BRR6 497 aa12.16□□□□□ -0.46
CLCN6-202ENST00000346436 PTPRMP28827 1452 aa12.16□□□□□ -0.46
CLCN6-202ENST00000346436 ARHGEF37A1IGU5 675 aa12.16□□□□□ -0.46
CLCN6-202ENST00000346436 ARHGEF16Q5VV41 709 aa12.16□□□□□ -0.46
CLCN6-202ENST00000346436 ATL3Q6DD88 541 aa12.16□□□□□ -0.46
CLCN6-202ENST00000346436 KIAA1524Q8TCG1 905 aa12.16□□□□□ -0.46
CLCN6-202ENST00000346436 GJB4Q9NTQ9 266 aa12.16□□□□□ -0.46
CLCN6-202ENST00000346436 ARPP21Q9UBL0 812 aaPredicted RBP12.16□□□□□ -0.46
CLCN6-202ENST00000346436 GUCA1BQ9UMX6 200 aa12.16□□□□□ -0.46
CLCN6-202ENST00000346436 KCNH4Q9UQ05 1017 aa12.16□□□□□ -0.46
CLCN6-202ENST00000346436 MYO3AQ8NEV4 1616 aa12.15□□□□□ -0.46
CLCN6-202ENST00000346436 M0R2C6 588 aa12.15□□□□□ -0.46
CLCN6-202ENST00000346436 ADKP55263 362 aaKnown RBP12.15□□□□□ -0.46
CLCN6-202ENST00000346436 SKIV2LQ15477 1246 aaKnown RBP12.15□□□□□ -0.46
CLCN6-202ENST00000346436 CCDC14Q49A88 953 aa12.15□□□□□ -0.46
CLCN6-202ENST00000346436 KIAA1468Q9P260 1216 aa12.15□□□□□ -0.46
CLCN6-202ENST00000346436 ARHGEF35A5YM69 484 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms