RNA–Protein interactions for RNA: ENST00000346141.10

TUBD1-203, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-203ENST00000346141 BIN2Q9UBW5 565 aaPredicted RBP14.37□□□□□ -0.11
TUBD1-203ENST00000346141 GABRQQ9UN88 632 aa14.37□□□□□ -0.11
TUBD1-203ENST00000346141 MGAMO43451 1857 aa14.37□□□□□ -0.11
TUBD1-203ENST00000346141 DDX60LQ5H9U9 1706 aaKnown RBP14.36□□□□□ -0.11
TUBD1-203ENST00000346141 GALR2O43603 387 aaPredicted RBP14.36□□□□□ -0.11
TUBD1-203ENST00000346141 SMARCA5O60264 1052 aaPredicted RBP14.36□□□□□ -0.11
TUBD1-203ENST00000346141 ADCY3O60266 1144 aa14.36□□□□□ -0.11
TUBD1-203ENST00000346141 SHMT1P34896 483 aa14.36□□□□□ -0.11
TUBD1-203ENST00000346141 GABPAQ06546 454 aa14.36□□□□□ -0.11
TUBD1-203ENST00000346141 UBE3CQ15386 1083 aa14.36□□□□□ -0.11
TUBD1-203ENST00000346141 ZSCAN25Q6NSZ9 544 aa14.36□□□□□ -0.11
TUBD1-203ENST00000346141 NKX2-3Q8TAU0 364 aa14.36□□□□□ -0.11
TUBD1-203ENST00000346141 GTF3C2Q8WUA4 911 aaPredicted RBP14.36□□□□□ -0.11
TUBD1-203ENST00000346141 GPATCH3Q96I76 525 aa14.36□□□□□ -0.11
TUBD1-203ENST00000346141 FEZ1Q99689 392 aa14.36□□□□□ -0.11
TUBD1-203ENST00000346141 ECHDC1Q9NTX5 307 aa14.36□□□□□ -0.11
TUBD1-203ENST00000346141 MORF4L1Q9UBU8 362 aa14.36□□□□□ -0.11
TUBD1-203ENST00000346141 CLCN6P51797 869 aa14.35□□□□□ -0.11
TUBD1-203ENST00000346141 USP14P54578 494 aa14.35□□□□□ -0.11
TUBD1-203ENST00000346141 RAB3GAP1Q15042 981 aa14.35□□□□□ -0.11
TUBD1-203ENST00000346141 MTFR1Q15390 333 aa14.35□□□□□ -0.11
TUBD1-203ENST00000346141 SDR42E1Q8WUS8 393 aa14.35□□□□□ -0.11
TUBD1-203ENST00000346141 C12orf42Q96LP6 360 aa14.35□□□□□ -0.11
TUBD1-203ENST00000346141 ARMT1Q9H993 441 aa14.35□□□□□ -0.11
TUBD1-203ENST00000346141 EMILIN3Q9NT22 766 aa14.35□□□□□ -0.11
TUBD1-203ENST00000346141 ATP8A2Q9NTI2 1148 aa14.35□□□□□ -0.11
TUBD1-203ENST00000346141 NAV1Q8NEY1 1877 aa14.35□□□□□ -0.11
TUBD1-203ENST00000346141 MBD4O95243 580 aa14.34□□□□□ -0.11
TUBD1-203ENST00000346141 GJB1P08034 283 aa14.34□□□□□ -0.11
TUBD1-203ENST00000346141 CCL5P13501 91 aa14.34□□□□□ -0.11
TUBD1-203ENST00000346141 HERVK_113P62684 666 aa14.34□□□□□ -0.11
TUBD1-203ENST00000346141 DDRGK1Q96HY6 314 aa14.34□□□□□ -0.11
TUBD1-203ENST00000346141 P2RX7Q99572 595 aaKnown RBP14.34□□□□□ -0.11
TUBD1-203ENST00000346141 KIAA1683Q9H0B3 1180 aa14.34□□□□□ -0.11
TUBD1-203ENST00000346141 SWAP70Q9UH65 585 aa14.34□□□□□ -0.11
TUBD1-203ENST00000346141 AMOTL1Q8IY63 956 aa14.33□□□□□ -0.12
TUBD1-203ENST00000346141 GPRC5AQ8NFJ5 357 aa14.33□□□□□ -0.12
TUBD1-203ENST00000346141 RNF208Q9H0X6 261 aa14.33□□□□□ -0.12
TUBD1-203ENST00000346141 CEP290O15078 2479 aa14.33□□□□□ -0.12
TUBD1-203ENST00000346141 PRKAB2O43741 272 aa14.32□□□□□ -0.12
TUBD1-203ENST00000346141 ELNP15502 786 aa14.32□□□□□ -0.12
TUBD1-203ENST00000346141 GJA8P48165 433 aa14.32□□□□□ -0.12
TUBD1-203ENST00000346141 RRP1P56182 461 aaKnown RBP14.32□□□□□ -0.12
TUBD1-203ENST00000346141 KIF12Q96FN5 646 aa14.32□□□□□ -0.12
TUBD1-203ENST00000346141 USP17L15C9J2P7 530 aa14.31□□□□□ -0.12
TUBD1-203ENST00000346141 USP17L13C9JLJ4 530 aa14.31□□□□□ -0.12
TUBD1-203ENST00000346141 USP17L11C9JVI0 530 aa14.31□□□□□ -0.12
TUBD1-203ENST00000346141 USP17L18D6R9N7 530 aa14.31□□□□□ -0.12
TUBD1-203ENST00000346141 USP17L22D6RA61 530 aa14.31□□□□□ -0.12
TUBD1-203ENST00000346141 USP17L17D6RBQ6 530 aa14.31□□□□□ -0.12
TUBD1-203ENST00000346141 USP17L19D6RCP7 530 aa14.31□□□□□ -0.12
TUBD1-203ENST00000346141 USP17L20D6RJB6 530 aa14.31□□□□□ -0.12
TUBD1-203ENST00000346141 MPHOSPH10O00566 681 aaKnown RBP14.31□□□□□ -0.12
TUBD1-203ENST00000346141 INHAP05111 366 aa14.31□□□□□ -0.12
TUBD1-203ENST00000346141 CAPN2P17655 700 aa14.31□□□□□ -0.12
TUBD1-203ENST00000346141 VCAM1P19320 739 aa14.31□□□□□ -0.12
TUBD1-203ENST00000346141 GUCY1A2P33402 732 aa14.31□□□□□ -0.12
TUBD1-203ENST00000346141 USP17L24Q0WX57 530 aa14.31□□□□□ -0.12
TUBD1-203ENST00000346141 ZYXQ15942 572 aaKnown RBP14.31□□□□□ -0.12
TUBD1-203ENST00000346141 SLFNL1Q499Z3 407 aa14.31□□□□□ -0.12
TUBD1-203ENST00000346141 ACER1Q8TDN7 264 aa14.31□□□□□ -0.12
TUBD1-203ENST00000346141 SHISA4Q96DD7 197 aa14.31□□□□□ -0.12
TUBD1-203ENST00000346141 TXNRD2Q9NNW7 524 aa14.31□□□□□ -0.12
TUBD1-203ENST00000346141 RBPJLQ9UBG7 517 aa14.31□□□□□ -0.12
TUBD1-203ENST00000346141 CYP2D6P10635 497 aa14.31□□□□□ -0.12
TUBD1-203ENST00000346141 MAPK4P31152 587 aa14.31□□□□□ -0.12
TUBD1-203ENST00000346141 ERVK-9P63128 1117 aa14.31□□□□□ -0.12
TUBD1-203ENST00000346141 ERVK-24P63145 666 aa14.31□□□□□ -0.12
TUBD1-203ENST00000346141 SEPT2Q15019 361 aa14.31□□□□□ -0.12
TUBD1-203ENST00000346141 TMEM179Q6ZVK1 233 aa14.31□□□□□ -0.12
TUBD1-203ENST00000346141 KBTBD3Q8NAB2 608 aa14.31□□□□□ -0.12
TUBD1-203ENST00000346141 U2AF1L4Q8WU68 220 aaKnown RBP14.31□□□□□ -0.12
TUBD1-203ENST00000346141 SOCS4Q8WXH5 440 aa14.31□□□□□ -0.12
TUBD1-203ENST00000346141 PUS7LQ9H0K6 701 aaKnown RBP14.31□□□□□ -0.12
TUBD1-203ENST00000346141 UNC93B1Q9H1C4 597 aa14.31□□□□□ -0.12
TUBD1-203ENST00000346141 GJD2Q9UKL4 321 aa14.31□□□□□ -0.12
TUBD1-203ENST00000346141 PCDHB15Q9Y5E8 787 aa14.31□□□□□ -0.12
TUBD1-203ENST00000346141 SLC4A4Q9Y6R1 1079 aa14.31□□□□□ -0.12
TUBD1-203ENST00000346141 DOCK3Q8IZD9 2030 aa14.3□□□□□ -0.12
TUBD1-203ENST00000346141 TTC41PQ6P2S7 1318 aa14.3□□□□□ -0.12
TUBD1-203ENST00000346141 HMGCRP04035 888 aa14.3□□□□□ -0.12
TUBD1-203ENST00000346141 CHGBP05060 677 aa14.3□□□□□ -0.12
TUBD1-203ENST00000346141 C12orf60Q5U649 245 aa14.3□□□□□ -0.12
TUBD1-203ENST00000346141 CATSPERGQ6ZRH7 1159 aa14.3□□□□□ -0.12
TUBD1-203ENST00000346141 CCAR1Q8IX12 1150 aaKnown RBP14.3□□□□□ -0.12
TUBD1-203ENST00000346141 SLC44A5Q8NCS7 719 aa14.3□□□□□ -0.12
TUBD1-203ENST00000346141 GCC1Q96CN9 775 aa14.3□□□□□ -0.12
TUBD1-203ENST00000346141 MS4A3Q96HJ5 214 aa14.3□□□□□ -0.12
TUBD1-203ENST00000346141 CCDC17Q96LX7 622 aa14.3□□□□□ -0.12
TUBD1-203ENST00000346141 PAGR1Q9BTK6 254 aa14.3□□□□□ -0.12
TUBD1-203ENST00000346141 RABGAP1Q9Y3P9 1069 aa14.3□□□□□ -0.12
TUBD1-203ENST00000346141 MYH7P12883 1935 aa14.3□□□□□ -0.12
TUBD1-203ENST00000346141 USP17L12C9JPN9 530 aa14.29□□□□□ -0.12
TUBD1-203ENST00000346141 USP17L21D6R901 530 aa14.29□□□□□ -0.12
TUBD1-203ENST00000346141 ERC2O15083 957 aa14.29□□□□□ -0.12
TUBD1-203ENST00000346141 MAP3K13O43283 966 aa14.29□□□□□ -0.12
TUBD1-203ENST00000346141 ZFYP08048 801 aaPredicted RBP14.29□□□□□ -0.12
TUBD1-203ENST00000346141 CCNA1P78396 465 aa14.29□□□□□ -0.12
TUBD1-203ENST00000346141 GSE1Q14687 1217 aa14.29□□□□□ -0.12
TUBD1-203ENST00000346141 LRRFIP1Q32MZ4 808 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms