RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 USP17L17D6RBQ6 530 aa24.06■■□□□ 1.44
CEACAM3-201ENST00000344550 USP17L19D6RCP7 530 aa24.06■■□□□ 1.44
CEACAM3-201ENST00000344550 USP17L20D6RJB6 530 aa24.06■■□□□ 1.44
CEACAM3-201ENST00000344550 PRKAB2O43741 272 aa24.06■■□□□ 1.44
CEACAM3-201ENST00000344550 HERVK_113P62684 666 aa24.06■■□□□ 1.44
CEACAM3-201ENST00000344550 PRKCZQ05513 592 aa24.06■■□□□ 1.44
CEACAM3-201ENST00000344550 USP17L24Q0WX57 530 aa24.06■■□□□ 1.44
CEACAM3-201ENST00000344550 SBK1Q52WX2 424 aa24.06■■□□□ 1.44
CEACAM3-201ENST00000344550 FLT3LGP49771 235 aa24.05■■□□□ 1.44
CEACAM3-201ENST00000344550 UBXN2AP68543 259 aa24.05■■□□□ 1.44
CEACAM3-201ENST00000344550 C16orf86Q6ZW13 317 aa24.05■■□□□ 1.44
CEACAM3-201ENST00000344550 GPRC5AQ8NFJ5 357 aa24.05■■□□□ 1.44
CEACAM3-201ENST00000344550 SH3TC2Q8TF17 1288 aa24.05■■□□□ 1.44
CEACAM3-201ENST00000344550 P2RX7Q99572 595 aaKnown RBP24.05■■□□□ 1.44
CEACAM3-201ENST00000344550 POTEFA5A3E0 1075 aa24.04■■□□□ 1.44
CEACAM3-201ENST00000344550 GUCY1A2P33402 732 aa24.04■■□□□ 1.44
CEACAM3-201ENST00000344550 SLFNL1Q499Z3 407 aa24.04■■□□□ 1.44
CEACAM3-201ENST00000344550 LBX2Q6XYB7 198 aa24.04■■□□□ 1.44
CEACAM3-201ENST00000344550 NKX2-3Q8TAU0 364 aa24.04■■□□□ 1.44
CEACAM3-201ENST00000344550 SH2D4AQ9H788 454 aa24.04■■□□□ 1.44
CEACAM3-201ENST00000344550 STAP2Q9UGK3 403 aa24.04■■□□□ 1.44
CEACAM3-201ENST00000344550 ZSWIM8A7E2V4 1837 aa24.04■■□□□ 1.44
CEACAM3-201ENST00000344550 SALL3Q9BXA9 1300 aa24.04■■□□□ 1.44
CEACAM3-201ENST00000344550 SEPT2Q15019 361 aa24.03■■□□□ 1.44
CEACAM3-201ENST00000344550 ANKRD45Q5TZF3 282 aa24.03■■□□□ 1.44
CEACAM3-201ENST00000344550 CTR9Q6PD62 1173 aa24.03■■□□□ 1.44
CEACAM3-201ENST00000344550 OSBP2Q969R2 916 aa24.03■■□□□ 1.44
CEACAM3-201ENST00000344550 RWDD1Q9H446 243 aaPredicted RBP24.03■■□□□ 1.44
CEACAM3-201ENST00000344550 TNRC18O15417 2968 aaPredicted RBP24.02■■□□□ 1.44
CEACAM3-201ENST00000344550 MPHOSPH10O00566 681 aaKnown RBP24.02■■□□□ 1.44
CEACAM3-201ENST00000344550 ADCY3O60266 1144 aa24.02■■□□□ 1.44
CEACAM3-201ENST00000344550 CYP2D6P10635 497 aa24.02■■□□□ 1.44
CEACAM3-201ENST00000344550 MAPK4P31152 587 aa24.02■■□□□ 1.44
CEACAM3-201ENST00000344550 CDK8P49336 464 aa24.02■■□□□ 1.44
CEACAM3-201ENST00000344550 TSHZ3Q63HK5 1081 aa24.02■■□□□ 1.44
CEACAM3-201ENST00000344550 CATSPERGQ6ZRH7 1159 aa24.02■■□□□ 1.44
CEACAM3-201ENST00000344550 LPAR1Q92633 364 aa24.02■■□□□ 1.44
CEACAM3-201ENST00000344550 GABRQQ9UN88 632 aa24.02■■□□□ 1.44
CEACAM3-201ENST00000344550 RABGAP1Q9Y3P9 1069 aa24.02■■□□□ 1.44
CEACAM3-201ENST00000344550 GSG1L2A8MUP6 293 aa24.01■■□□□ 1.43
CEACAM3-201ENST00000344550 CHGBP05060 677 aa24.01■■□□□ 1.43
CEACAM3-201ENST00000344550 VCAM1P19320 739 aa24.01■■□□□ 1.43
CEACAM3-201ENST00000344550 ACER1Q8TDN7 264 aa24.01■■□□□ 1.43
CEACAM3-201ENST00000344550 ZNF287Q9HBT7 754 aa24.01■■□□□ 1.43
CEACAM3-201ENST00000344550 ARHGEF10LQ9HCE6 1279 aa24.01■■□□□ 1.43
CEACAM3-201ENST00000344550 RBPJLQ9UBG7 517 aa24.01■■□□□ 1.43
CEACAM3-201ENST00000344550 GPAA1O43292 621 aa24■■□□□ 1.43
CEACAM3-201ENST00000344550 GJB1P08034 283 aa24■■□□□ 1.43
CEACAM3-201ENST00000344550 CCNA1P78396 465 aa24■■□□□ 1.43
CEACAM3-201ENST00000344550 DYNLL2Q96FJ2 89 aa24■■□□□ 1.43
CEACAM3-201ENST00000344550 KANSL2Q9H9L4 492 aa24■■□□□ 1.43
CEACAM3-201ENST00000344550 EN2P19622 333 aaPredicted RBP23.99■■□□□ 1.43
CEACAM3-201ENST00000344550 ERVK-9P63128 1117 aa23.99■■□□□ 1.43
CEACAM3-201ENST00000344550 ERVK-24P63145 666 aa23.99■■□□□ 1.43
CEACAM3-201ENST00000344550 SMC5Q8IY18 1101 aa23.99■■□□□ 1.43
CEACAM3-201ENST00000344550 SLC44A5Q8NCS7 719 aa23.99■■□□□ 1.43
CEACAM3-201ENST00000344550 SOCS4Q8WXH5 440 aa23.99■■□□□ 1.43
CEACAM3-201ENST00000344550 NACAP1Q9BZK3 213 aa23.99■■□□□ 1.43
CEACAM3-201ENST00000344550 HOXC10Q9NYD6 342 aa23.99■■□□□ 1.43
CEACAM3-201ENST00000344550 BIN2Q9UBW5 565 aaPredicted RBP23.99■■□□□ 1.43
CEACAM3-201ENST00000344550 GJD2Q9UKL4 321 aa23.99■■□□□ 1.43
CEACAM3-201ENST00000344550 TMX2Q9Y320 296 aa23.99■■□□□ 1.43
CEACAM3-201ENST00000344550 ROBO3Q96MS0 1386 aa23.99■■□□□ 1.43
CEACAM3-201ENST00000344550 BAZ2AQ9UIF9 1905 aaKnown RBP23.98■■□□□ 1.43
CEACAM3-201ENST00000344550 PATL2C9JE40 543 aaKnown RBP23.98■■□□□ 1.43
CEACAM3-201ENST00000344550 ECM2O94769 699 aaPredicted RBP23.98■■□□□ 1.43
CEACAM3-201ENST00000344550 XRCC5P13010 732 aaKnown RBP23.98■■□□□ 1.43
CEACAM3-201ENST00000344550 EVX2Q03828 476 aa23.98■■□□□ 1.43
CEACAM3-201ENST00000344550 TRMT44Q8IYL2 757 aaKnown RBP23.98■■□□□ 1.43
CEACAM3-201ENST00000344550 OTUD7AQ8TE49 926 aaPredicted RBP23.98■■□□□ 1.43
CEACAM3-201ENST00000344550 EVI5LQ96CN4 794 aa23.98■■□□□ 1.43
CEACAM3-201ENST00000344550 FSD1Q9BTV5 496 aa23.98■■□□□ 1.43
CEACAM3-201ENST00000344550 TXNRD2Q9NNW7 524 aa23.98■■□□□ 1.43
CEACAM3-201ENST00000344550 PDE1AP54750 535 aa23.97■■□□□ 1.43
CEACAM3-201ENST00000344550 ICA1Q05084 483 aa23.97■■□□□ 1.43
CEACAM3-201ENST00000344550 ZYXQ15942 572 aaKnown RBP23.97■■□□□ 1.43
CEACAM3-201ENST00000344550 ZMYM1Q5SVZ6 1142 aa23.97■■□□□ 1.43
CEACAM3-201ENST00000344550 CCAR1Q8IX12 1150 aaKnown RBP23.97■■□□□ 1.43
CEACAM3-201ENST00000344550 A0A1W2PRG0 241 aa23.96■■□□□ 1.43
CEACAM3-201ENST00000344550 CCL5P13501 91 aa23.96■■□□□ 1.43
CEACAM3-201ENST00000344550 AKR1B1P15121 316 aa23.96■■□□□ 1.43
CEACAM3-201ENST00000344550 GJA8P48165 433 aa23.96■■□□□ 1.43
CEACAM3-201ENST00000344550 COG2Q14746 738 aa23.96■■□□□ 1.43
CEACAM3-201ENST00000344550 PRPF38BQ5VTL8 546 aaKnown RBP23.96■■□□□ 1.43
CEACAM3-201ENST00000344550 RPAP3Q9H6T3 665 aaPredicted RBP23.96■■□□□ 1.43
CEACAM3-201ENST00000344550 MYH8P13535 1937 aa23.95■■□□□ 1.42
CEACAM3-201ENST00000344550 CYP2D7A0A087X1C5 515 aa23.95■■□□□ 1.42
CEACAM3-201ENST00000344550 MTFR1Q15390 333 aa23.95■■□□□ 1.42
CEACAM3-201ENST00000344550 SIAH1Q8IUQ4 282 aa23.95■■□□□ 1.42
CEACAM3-201ENST00000344550 MB21D1Q8N884 522 aa23.95■■□□□ 1.42
CEACAM3-201ENST00000344550 NUDT12Q9BQG2 462 aa23.95■■□□□ 1.42
CEACAM3-201ENST00000344550 RNF208Q9H0X6 261 aa23.95■■□□□ 1.42
CEACAM3-201ENST00000344550 VCPKMTQ9H867 229 aa23.95■■□□□ 1.42
CEACAM3-201ENST00000344550 DOCK3Q8IZD9 2030 aa23.94■■□□□ 1.42
CEACAM3-201ENST00000344550 HMGCRP04035 888 aa23.94■■□□□ 1.42
CEACAM3-201ENST00000344550 TDO2P48775 406 aa23.94■■□□□ 1.42
CEACAM3-201ENST00000344550 MKNK2Q9HBH9 465 aa23.94■■□□□ 1.42
CEACAM3-201ENST00000344550 SYNPO2Q9UMS6 1093 aa23.94■■□□□ 1.42
CEACAM3-201ENST00000344550 M0R2C6 588 aa23.93■■□□□ 1.42
CEACAM3-201ENST00000344550 WDR46O15213 610 aaKnown RBP23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms