RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 CTNND1O60716 968 aaKnown RBP15.99■□□□□ 0.15
HERPUD1-202ENST00000344114 GNL3LQ9NVN8 582 aaKnown RBP15.99■□□□□ 0.15
HERPUD1-202ENST00000344114 DENND2AQ9ULE3 1009 aa15.99■□□□□ 0.15
HERPUD1-202ENST00000344114 CDK5RAP2Q96SN8 1893 aa15.98■□□□□ 0.15
HERPUD1-202ENST00000344114 LAMA3Q16787 3333 aa15.98■□□□□ 0.15
HERPUD1-202ENST00000344114 COL6A3P12111 3177 aa15.98■□□□□ 0.15
HERPUD1-202ENST00000344114 PLXNB2O15031 1838 aa15.98■□□□□ 0.15
HERPUD1-202ENST00000344114 BAZ2AQ9UIF9 1905 aaKnown RBP15.98■□□□□ 0.15
HERPUD1-202ENST00000344114 DDTLA6NHG4 134 aaPredicted RBP15.98■□□□□ 0.15
HERPUD1-202ENST00000344114 SLC27A2O14975 620 aa15.98■□□□□ 0.15
HERPUD1-202ENST00000344114 BMP8BP34820 402 aa15.98■□□□□ 0.15
HERPUD1-202ENST00000344114 DDIT3P35638 169 aa15.98■□□□□ 0.15
HERPUD1-202ENST00000344114 RASEFQ8IZ41 740 aa15.98■□□□□ 0.15
HERPUD1-202ENST00000344114 SPRYD3Q8NCJ5 442 aa15.98■□□□□ 0.15
HERPUD1-202ENST00000344114 SMCR8Q8TEV9 937 aaPredicted RBP15.98■□□□□ 0.15
HERPUD1-202ENST00000344114 APPBP2Q92624 585 aa15.98■□□□□ 0.15
HERPUD1-202ENST00000344114 PAWRQ96IZ0 340 aaKnown RBP15.98■□□□□ 0.15
HERPUD1-202ENST00000344114 GDF15Q99988 308 aa15.98■□□□□ 0.15
HERPUD1-202ENST00000344114 AGTPBP1Q9UPW5 1226 aa15.98■□□□□ 0.15
HERPUD1-202ENST00000344114 TCHHQ07283 1943 aa15.97■□□□□ 0.15
HERPUD1-202ENST00000344114 DDX60LQ5H9U9 1706 aaKnown RBP15.97■□□□□ 0.15
HERPUD1-202ENST00000344114 CYP2E1P05181 493 aaPredicted RBP15.97■□□□□ 0.15
HERPUD1-202ENST00000344114 SLURP2P0DP57 97 aa15.97■□□□□ 0.15
HERPUD1-202ENST00000344114 PSMA5P28066 241 aa15.97■□□□□ 0.15
HERPUD1-202ENST00000344114 KRT32Q14532 448 aa15.97■□□□□ 0.15
HERPUD1-202ENST00000344114 FAM110CQ1W6H9 321 aa15.97■□□□□ 0.15
HERPUD1-202ENST00000344114 TSGA10IPQ3SY00 556 aa15.97■□□□□ 0.15
HERPUD1-202ENST00000344114 GPR153Q6NV75 609 aa15.97■□□□□ 0.15
HERPUD1-202ENST00000344114 PI16Q6UXB8 463 aa15.97■□□□□ 0.15
HERPUD1-202ENST00000344114 CCDC129Q6ZRS4 1044 aa15.97■□□□□ 0.15
HERPUD1-202ENST00000344114 ANKLE1Q8NAG6 615 aa15.97■□□□□ 0.15
HERPUD1-202ENST00000344114 SPATA5Q8NB90 893 aa15.97■□□□□ 0.15
HERPUD1-202ENST00000344114 COA7Q96BR5 231 aa15.97■□□□□ 0.15
HERPUD1-202ENST00000344114 SEC62Q99442 399 aaKnown RBP15.97■□□□□ 0.15
HERPUD1-202ENST00000344114 DDX4Q9NQI0 724 aaKnown RBP15.97■□□□□ 0.15
HERPUD1-202ENST00000344114 TRIM75PA6NK02 468 aa15.96■□□□□ 0.15
HERPUD1-202ENST00000344114 CASTP20810 708 aaKnown RBP15.96■□□□□ 0.15
HERPUD1-202ENST00000344114 ADD2P35612 726 aa15.96■□□□□ 0.15
HERPUD1-202ENST00000344114 RASGRF1Q13972 1273 aa15.96■□□□□ 0.15
HERPUD1-202ENST00000344114 NECAB2Q7Z6G3 386 aa15.96■□□□□ 0.15
HERPUD1-202ENST00000344114 ZGPATQ8N5A5 531 aaKnown RBP15.96■□□□□ 0.15
HERPUD1-202ENST00000344114 ANKRD13CQ8N6S4 541 aa15.96■□□□□ 0.15
HERPUD1-202ENST00000344114 DIS3LQ8TF46 1054 aaKnown RBP15.96■□□□□ 0.15
HERPUD1-202ENST00000344114 FAM163AQ96GL9 167 aaPredicted RBP15.96■□□□□ 0.15
HERPUD1-202ENST00000344114 JAKMIP1Q96N16 626 aaKnown RBP15.96■□□□□ 0.15
HERPUD1-202ENST00000344114 TTC14Q96N46 770 aa15.96■□□□□ 0.15
HERPUD1-202ENST00000344114 UPF3BQ9BZI7 483 aaKnown RBP15.96■□□□□ 0.15
HERPUD1-202ENST00000344114 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.96■□□□□ 0.158e-7■■■■□ 22.8
HERPUD1-202ENST00000344114 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.96■□□□□ 0.15
HERPUD1-202ENST00000344114 M0R2C6 588 aa15.95■□□□□ 0.14
HERPUD1-202ENST00000344114 UBE3CQ15386 1083 aa15.95■□□□□ 0.14
HERPUD1-202ENST00000344114 TREML2Q5T2D2 321 aa15.95■□□□□ 0.14
HERPUD1-202ENST00000344114 ZSCAN29Q8IWY8 852 aaPredicted RBP15.95■□□□□ 0.14
HERPUD1-202ENST00000344114 PROCA1Q8NCQ7 364 aaPredicted RBP15.95■□□□□ 0.14
HERPUD1-202ENST00000344114 ZSWIM6Q9HCJ5 1215 aa15.95■□□□□ 0.14
HERPUD1-202ENST00000344114 PNMA3Q9UL41 463 aa15.95■□□□□ 0.14
HERPUD1-202ENST00000344114 CYP46A1Q9Y6A2 500 aa15.95■□□□□ 0.14
HERPUD1-202ENST00000344114 PDS5AQ29RF7 1337 aaKnown RBP15.95■□□□□ 0.14
HERPUD1-202ENST00000344114 MYH15Q9Y2K3 1946 aa15.94■□□□□ 0.14
HERPUD1-202ENST00000344114 TBC1D12O60347 775 aa15.94■□□□□ 0.14
HERPUD1-202ENST00000344114 HMGCRP04035 888 aa15.94■□□□□ 0.14
HERPUD1-202ENST00000344114 CHGBP05060 677 aa15.94■□□□□ 0.14
HERPUD1-202ENST00000344114 MNX1P50219 401 aaPredicted RBP15.94■□□□□ 0.14
HERPUD1-202ENST00000344114 VPS53Q5VIR6 699 aa15.94■□□□□ 0.14
HERPUD1-202ENST00000344114 CCDC84Q86UT8 332 aaPredicted RBP15.94■□□□□ 0.14
HERPUD1-202ENST00000344114 OSBP2Q969R2 916 aa15.94■□□□□ 0.14
HERPUD1-202ENST00000344114 PIH1D3Q9NQM4 214 aaKnown RBP15.94■□□□□ 0.14
HERPUD1-202ENST00000344114 TAOK2Q9UL54 1235 aa15.94■□□□□ 0.14
HERPUD1-202ENST00000344114 HSPD1P10809 573 aaKnown RBP15.93■□□□□ 0.14
HERPUD1-202ENST00000344114 MAP3K12Q12852 859 aa15.93■□□□□ 0.14
HERPUD1-202ENST00000344114 CUL4AQ13619 759 aa15.93■□□□□ 0.14
HERPUD1-202ENST00000344114 RUFY3Q7L099 469 aa15.93■□□□□ 0.14
HERPUD1-202ENST00000344114 SLF2Q8IX21 1173 aa15.93■□□□□ 0.14
HERPUD1-202ENST00000344114 TMX3Q96JJ7 454 aa15.93■□□□□ 0.14
HERPUD1-202ENST00000344114 CWC22Q9HCG8 908 aaKnown RBP15.93■□□□□ 0.14
HERPUD1-202ENST00000344114 GJD2Q9UKL4 321 aa15.93■□□□□ 0.14
HERPUD1-202ENST00000344114 FOCADQ5VW36 1801 aa15.93■□□□□ 0.14
HERPUD1-202ENST00000344114 NAV1Q8NEY1 1877 aa15.93■□□□□ 0.14
HERPUD1-202ENST00000344114 MROH7-TTC4A0A0A0MT08 1334 aa15.93■□□□□ 0.14
HERPUD1-202ENST00000344114 RPTORQ8N122 1335 aa15.93■□□□□ 0.14
HERPUD1-202ENST00000344114 COL2A1P02458 1487 aaPredicted RBP15.93■□□□□ 0.14
HERPUD1-202ENST00000344114 NPM3O75607 178 aaKnown RBP15.92■□□□□ 0.14
HERPUD1-202ENST00000344114 IDH1O75874 414 aaKnown RBP15.92■□□□□ 0.14
HERPUD1-202ENST00000344114 PDE6AP16499 860 aa15.92■□□□□ 0.14
HERPUD1-202ENST00000344114 BTDP43251 543 aa15.92■□□□□ 0.14
HERPUD1-202ENST00000344114 GCLCP48506 637 aaPredicted RBP15.92■□□□□ 0.14
HERPUD1-202ENST00000344114 RHBDL3P58872 404 aa15.92■□□□□ 0.14
HERPUD1-202ENST00000344114 PICALMQ13492 652 aa15.92■□□□□ 0.14
HERPUD1-202ENST00000344114 NFKBIBQ15653 356 aa15.92■□□□□ 0.14
HERPUD1-202ENST00000344114 ADCK5Q3MIX3 580 aa15.92■□□□□ 0.14
HERPUD1-202ENST00000344114 LRIT3Q3SXY7 679 aa15.92■□□□□ 0.14
HERPUD1-202ENST00000344114 SLC9C2Q5TAH2 1124 aa15.92■□□□□ 0.14
HERPUD1-202ENST00000344114 DZIP1Q86YF9 867 aaKnown RBP15.92■□□□□ 0.14
HERPUD1-202ENST00000344114 C7orf61Q8IZ16 206 aa15.92■□□□□ 0.14
HERPUD1-202ENST00000344114 INTS4Q96HW7 963 aaKnown RBP15.92■□□□□ 0.14
HERPUD1-202ENST00000344114 OSBPL5Q9H0X9 879 aaPredicted RBP15.92■□□□□ 0.14
HERPUD1-202ENST00000344114 AK2P54819 239 aa15.91■□□□□ 0.14
HERPUD1-202ENST00000344114 NBR1Q14596 966 aa15.91■□□□□ 0.14
HERPUD1-202ENST00000344114 SLFNL1Q499Z3 407 aa15.91■□□□□ 0.14
HERPUD1-202ENST00000344114 BLOC1S2Q6QNY1 142 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms