RNA–Protein interactions for RNA: ENST00000343735.8

CLDN18-202, Transcript of claudin 18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLDN18, Length 3,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-202ENST00000343735 RBM26Q5T8P6 1007 aaKnown RBP11.37□□□□□ -0.59
CLDN18-202ENST00000343735 CKAP2LQ8IYA6 745 aa11.37□□□□□ -0.59
CLDN18-202ENST00000343735 C17orf53Q8N3J3 647 aaPredicted RBP11.37□□□□□ -0.59
CLDN18-202ENST00000343735 IGDCC4Q8TDY8 1250 aa11.37□□□□□ -0.59
CLDN18-202ENST00000343735 RBSNQ9H1K0 784 aa11.37□□□□□ -0.59
CLDN18-202ENST00000343735 TPCN1Q9ULQ1 816 aa11.37□□□□□ -0.59
CLDN18-202ENST00000343735 PCDHAC2Q9Y5I4 1007 aa11.37□□□□□ -0.59
CLDN18-202ENST00000343735 MYH1P12882 1939 aa11.36□□□□□ -0.59
CLDN18-202ENST00000343735 DDX60LQ5H9U9 1706 aaKnown RBP11.36□□□□□ -0.59
CLDN18-202ENST00000343735 CLRN2A0PK11 232 aa11.36□□□□□ -0.59
CLDN18-202ENST00000343735 TCP10L2B9ZVM9 353 aa11.36□□□□□ -0.59
CLDN18-202ENST00000343735 CALM1P0DP23 149 aa11.36□□□□□ -0.59
CLDN18-202ENST00000343735 CALM2P0DP24 149 aa11.36□□□□□ -0.59
CLDN18-202ENST00000343735 CALM3P0DP25 149 aa11.36□□□□□ -0.59
CLDN18-202ENST00000343735 TFAP4Q01664 338 aa11.36□□□□□ -0.59
CLDN18-202ENST00000343735 ZSCAN23Q3MJ62 389 aa11.36□□□□□ -0.59
CLDN18-202ENST00000343735 METTL16Q86W50 562 aaKnown RBP11.36□□□□□ -0.59
CLDN18-202ENST00000343735 DGKHQ86XP1 1220 aa11.36□□□□□ -0.59
CLDN18-202ENST00000343735 INCENPQ9NQS7 918 aa11.36□□□□□ -0.59
CLDN18-202ENST00000343735 GJB4Q9NTQ9 266 aa11.36□□□□□ -0.59
CLDN18-202ENST00000343735 PPP2R3BQ9Y5P8 575 aa11.36□□□□□ -0.59
CLDN18-202ENST00000343735 CDK5RAP2Q96SN8 1893 aa11.36□□□□□ -0.59
CLDN18-202ENST00000343735 CPLX2Q6PUV4 134 aaKnown RBP11.36□□□□□ -0.59
CLDN18-202ENST00000343735 USP48Q86UV5 1035 aa11.36□□□□□ -0.59
CLDN18-202ENST00000343735 SPC24Q8NBT2 197 aa11.36□□□□□ -0.59
CLDN18-202ENST00000343735 DYNLL2Q96FJ2 89 aa11.36□□□□□ -0.59
CLDN18-202ENST00000343735 L3MBTL3Q96JM7 780 aaPredicted RBP11.36□□□□□ -0.59
CLDN18-202ENST00000343735 LLPHQ9BRT6 129 aaKnown RBP11.36□□□□□ -0.59
CLDN18-202ENST00000343735 CIZ1Q9ULV3 898 aaPredicted RBP11.36□□□□□ -0.59
CLDN18-202ENST00000343735 KIF3AQ9Y496 699 aa11.36□□□□□ -0.59
CLDN18-202ENST00000343735 SLC12A7Q9Y666 1083 aa11.36□□□□□ -0.59
CLDN18-202ENST00000343735 PFKFB2O60825 505 aa11.35□□□□□ -0.59
CLDN18-202ENST00000343735 PRDM1O75626 825 aa11.35□□□□□ -0.59
CLDN18-202ENST00000343735 ATP2B1P20020 1258 aa11.35□□□□□ -0.59
CLDN18-202ENST00000343735 CACNB3P54284 484 aa11.35□□□□□ -0.59
CLDN18-202ENST00000343735 NUCB2P80303 420 aa11.35□□□□□ -0.59
CLDN18-202ENST00000343735 NBPF9Q3BBW0 867 aa11.35□□□□□ -0.59
CLDN18-202ENST00000343735 IFIT1BQ5T764 474 aaKnown RBP11.35□□□□□ -0.59
CLDN18-202ENST00000343735 NEDD1Q8NHV4 660 aa11.35□□□□□ -0.59
CLDN18-202ENST00000343735 CSRNP1Q96S65 589 aa11.35□□□□□ -0.59
CLDN18-202ENST00000343735 FTOQ9C0B1 505 aaKnown RBP eCLIP11.35□□□□□ -0.59
CLDN18-202ENST00000343735 KLF18A0A0U1RQI7 1052 aa11.35□□□□□ -0.59
CLDN18-202ENST00000343735 CCDC196A0A1B0GTZ2 297 aa11.35□□□□□ -0.59
CLDN18-202ENST00000343735 IQCA1LA6NCM1 817 aa11.35□□□□□ -0.59
CLDN18-202ENST00000343735 TBC1D12O60347 775 aa11.35□□□□□ -0.59
CLDN18-202ENST00000343735 DDNO94850 711 aaPredicted RBP11.35□□□□□ -0.59
CLDN18-202ENST00000343735 RASA1P20936 1047 aa11.35□□□□□ -0.59
CLDN18-202ENST00000343735 TBC1D10BQ4KMP7 808 aaPredicted RBP11.35□□□□□ -0.59
CLDN18-202ENST00000343735 LY9Q9HBG7 655 aa11.35□□□□□ -0.59
CLDN18-202ENST00000343735 LMBRD1Q9NUN5 540 aa11.35□□□□□ -0.59
CLDN18-202ENST00000343735 TNKSO95271 1327 aa11.35□□□□□ -0.59
CLDN18-202ENST00000343735 PITPNM2Q9BZ72 1349 aa11.35□□□□□ -0.59
CLDN18-202ENST00000343735 GLTPD2A6NH11 291 aa11.35□□□□□ -0.59
CLDN18-202ENST00000343735 APOBRQ0VD83 1088 aa11.35□□□□□ -0.59
CLDN18-202ENST00000343735 ME3Q16798 604 aa11.35□□□□□ -0.59
CLDN18-202ENST00000343735 SAMD7Q7Z3H4 446 aa11.35□□□□□ -0.59
CLDN18-202ENST00000343735 CATIPQ7Z7H3 387 aa11.35□□□□□ -0.59
CLDN18-202ENST00000343735 ANKS1AQ92625 1134 aa11.35□□□□□ -0.59
CLDN18-202ENST00000343735 TACC3Q9Y6A5 838 aa11.35□□□□□ -0.59
CLDN18-202ENST00000343735 ADAMTSL1Q8N6G6 1762 aa11.34□□□□□ -0.59
CLDN18-202ENST00000343735 PDIA3P30101 505 aaKnown RBP11.34□□□□□ -0.59
CLDN18-202ENST00000343735 USP50Q70EL3 339 aaPredicted RBP11.34□□□□□ -0.59
CLDN18-202ENST00000343735 GTF3C6Q969F1 213 aa11.34□□□□□ -0.59
CLDN18-202ENST00000343735 HACL1Q9UJ83 578 aa11.34□□□□□ -0.59
CLDN18-202ENST00000343735 DDTLA6NHG4 134 aaPredicted RBP11.34□□□□□ -0.59
CLDN18-202ENST00000343735 ZBTB43O43298 467 aa11.34□□□□□ -0.59
CLDN18-202ENST00000343735 CDKL5O76039 1030 aa11.34□□□□□ -0.59
CLDN18-202ENST00000343735 LARP1BQ659C4 914 aaKnown RBP11.34□□□□□ -0.59
CLDN18-202ENST00000343735 TSC1Q92574 1164 aa11.34□□□□□ -0.59
CLDN18-202ENST00000343735 PLIN4Q96Q06 1357 aa11.34□□□□□ -0.59
CLDN18-202ENST00000343735 GOLGA6L4A6NEF3 574 aa11.34□□□□□ -0.59
CLDN18-202ENST00000343735 SYT1P21579 422 aa11.34□□□□□ -0.59
CLDN18-202ENST00000343735 SEC23AQ15436 765 aa11.34□□□□□ -0.59
CLDN18-202ENST00000343735 CERKLQ49MI3 558 aaPredicted RBP11.34□□□□□ -0.59
CLDN18-202ENST00000343735 FAM47AQ5JRC9 791 aa11.34□□□□□ -0.59
CLDN18-202ENST00000343735 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.34□□□□□ -0.59
CLDN18-202ENST00000343735 CABP5Q9NP86 173 aa11.34□□□□□ -0.59
CLDN18-202ENST00000343735 GOLGA8BA8MQT2 603 aa11.33□□□□□ -0.6
CLDN18-202ENST00000343735 DDAH1O94760 285 aa11.33□□□□□ -0.6
CLDN18-202ENST00000343735 HMGN5P82970 282 aaKnown RBP11.33□□□□□ -0.6
CLDN18-202ENST00000343735 DNTTIP2Q5QJE6 756 aaKnown RBP11.33□□□□□ -0.6
CLDN18-202ENST00000343735 ISM2Q6H9L7 571 aa11.33□□□□□ -0.6
CLDN18-202ENST00000343735 TATDN1Q6P1N9 297 aa11.33□□□□□ -0.6
CLDN18-202ENST00000343735 ZFPM1Q8IX07 1006 aa11.33□□□□□ -0.6
CLDN18-202ENST00000343735 KAT14Q9H8E8 782 aa11.33□□□□□ -0.6
CLDN18-202ENST00000343735 GINM1Q9NU53 330 aa11.33□□□□□ -0.6
CLDN18-202ENST00000343735 CNTNAP1P78357 1384 aa11.33□□□□□ -0.6
CLDN18-202ENST00000343735 CPLX1O14810 134 aa11.33□□□□□ -0.6
CLDN18-202ENST00000343735 TPM2P07951 284 aa11.33□□□□□ -0.6
CLDN18-202ENST00000343735 EPS15P42566 896 aa11.33□□□□□ -0.6
CLDN18-202ENST00000343735 METAP2P50579 478 aaKnown RBP eCLIP11.33□□□□□ -0.6
CLDN18-202ENST00000343735 RASA3Q14644 834 aa11.33□□□□□ -0.6
CLDN18-202ENST00000343735 APOA5Q6Q788 366 aa11.33□□□□□ -0.6
CLDN18-202ENST00000343735 ENAHQ8N8S7 591 aaPredicted RBP11.33□□□□□ -0.6
CLDN18-202ENST00000343735 ZC3H15Q8WU90 426 aaKnown RBP11.33□□□□□ -0.6
CLDN18-202ENST00000343735 MAP3K14Q99558 947 aa11.33□□□□□ -0.6
CLDN18-202ENST00000343735 ZKSCAN3Q9BRR0 538 aa11.33□□□□□ -0.6
CLDN18-202ENST00000343735 PDCP20941 246 aa11.32□□□□□ -0.6
CLDN18-202ENST00000343735 DCAF15Q66K64 600 aa11.32□□□□□ -0.6
CLDN18-202ENST00000343735 SH3BP5LQ7L8J4 393 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms